RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 VEGFBP49765 207 aa19.98■□□□□ 0.79
RTN3-214ENST00000545432 CNBD1Q8NA66 436 aa19.98■□□□□ 0.79
RTN3-214ENST00000545432 TMEM88BA6NKF7 163 aa19.97■□□□□ 0.79
RTN3-214ENST00000545432 DIAPH1O60610 1272 aaKnown RBP19.97■□□□□ 0.79
RTN3-214ENST00000545432 A1BGP04217 495 aa19.97■□□□□ 0.79
RTN3-214ENST00000545432 TRIM26Q12899 539 aaPredicted RBP19.97■□□□□ 0.79
RTN3-214ENST00000545432 CLEC4GQ6UXB4 293 aa19.97■□□□□ 0.79
RTN3-214ENST00000545432 RGL2O15211 777 aa19.96■□□□□ 0.79
RTN3-214ENST00000545432 VIRMAQ69YN4 1812 aaKnown RBP19.96■□□□□ 0.79
RTN3-214ENST00000545432 CEMIPQ8WUJ3 1361 aa19.95■□□□□ 0.79
RTN3-214ENST00000545432 SCN4AP35499 1836 aa19.95■□□□□ 0.78
RTN3-214ENST00000545432 RASSF10A6NK89 507 aa19.95■□□□□ 0.78
RTN3-214ENST00000545432 GNAT3A8MTJ3 354 aa19.95■□□□□ 0.78
RTN3-214ENST00000545432 ST5P78524 1137 aa19.95■□□□□ 0.78
RTN3-214ENST00000545432 FMNL2Q96PY5 1086 aa19.95■□□□□ 0.78
RTN3-214ENST00000545432 FKBP4Q02790 459 aaKnown RBP eCLIP19.94■□□□□ 0.78
RTN3-214ENST00000545432 TEFQ10587 303 aa19.94■□□□□ 0.78
RTN3-214ENST00000545432 CCDC93Q567U6 631 aa19.93■□□□□ 0.78
RTN3-214ENST00000545432 GAS2L2Q8NHY3 880 aa19.93■□□□□ 0.78
RTN3-214ENST00000545432 ADAMTSL1Q8N6G6 1762 aa19.93■□□□□ 0.78
RTN3-214ENST00000545432 ARFGEF2Q9Y6D5 1785 aa19.93■□□□□ 0.78
RTN3-214ENST00000545432 FZD9O00144 591 aa19.92■□□□□ 0.78
RTN3-214ENST00000545432 SLC34A2O95436 690 aa19.92■□□□□ 0.78
RTN3-214ENST00000545432 NPR1P16066 1061 aa19.92■□□□□ 0.78
RTN3-214ENST00000545432 DZIP3Q86Y13 1208 aaKnown RBP19.92■□□□□ 0.78
RTN3-214ENST00000545432 HACL1Q9UJ83 578 aa19.92■□□□□ 0.78
RTN3-214ENST00000545432 AIDAQ96BJ3 306 aa19.91■□□□□ 0.78
RTN3-214ENST00000545432 USP16Q9Y5T5 823 aa19.91■□□□□ 0.78
RTN3-214ENST00000545432 ZNF541Q9H0D2 1346 aa19.91■□□□□ 0.78
RTN3-214ENST00000545432 SIPA1L3O60292 1781 aaPredicted RBP19.9■□□□□ 0.78
RTN3-214ENST00000545432 KCNQ3O43525 872 aa19.9■□□□□ 0.78
RTN3-214ENST00000545432 PNMA8AQ86V59 439 aaPredicted RBP19.9■□□□□ 0.78
RTN3-214ENST00000545432 RTKN2Q8IZC4 609 aa19.9■□□□□ 0.78
RTN3-214ENST00000545432 SNED1Q8TER0 1413 aa19.9■□□□□ 0.78
RTN3-214ENST00000545432 COL3A1P02461 1466 aaPredicted RBP19.9■□□□□ 0.78
RTN3-214ENST00000545432 HSPA8P11142 646 aaKnown RBP19.89■□□□□ 0.77
RTN3-214ENST00000545432 EPHX2P34913 555 aa19.89■□□□□ 0.77
RTN3-214ENST00000545432 LBX1P52954 281 aa19.89■□□□□ 0.77
RTN3-214ENST00000545432 DEFB115Q30KQ5 88 aa19.89■□□□□ 0.77
RTN3-214ENST00000545432 ZNF330Q9Y3S2 320 aaPredicted RBP19.89■□□□□ 0.77
RTN3-214ENST00000545432 NBPF5PQ86XG9 351 aaPredicted RBP19.88■□□□□ 0.77
RTN3-214ENST00000545432 CNTROBQ8N137 903 aa19.88■□□□□ 0.77
RTN3-214ENST00000545432 ZNF277Q9NRM2 450 aaPredicted RBP19.88■□□□□ 0.77
RTN3-214ENST00000545432 NPC1L1Q9UHC9 1359 aa19.87■□□□□ 0.77
RTN3-214ENST00000545432 MAP2K1Q02750 393 aaPredicted RBP19.87■□□□□ 0.77
RTN3-214ENST00000545432 TPTE2Q6XPS3 522 aa19.87■□□□□ 0.77
RTN3-214ENST00000545432 NPM2Q86SE8 214 aaKnown RBP19.87■□□□□ 0.77
RTN3-214ENST00000545432 BCORQ6W2J9 1755 aa19.86■□□□□ 0.77
RTN3-214ENST00000545432 BTBD11A6QL63 1104 aa19.86■□□□□ 0.77
RTN3-214ENST00000545432 EAPPQ56P03 285 aaPredicted RBP19.86■□□□□ 0.77
RTN3-214ENST00000545432 GPC2Q8N158 579 aa19.86■□□□□ 0.77
RTN3-214ENST00000545432 ABHD8Q96I13 439 aa19.86■□□□□ 0.77
RTN3-214ENST00000545432 PSMD1Q99460 953 aa19.86■□□□□ 0.77
RTN3-214ENST00000545432 KIF7Q2M1P5 1343 aa19.85■□□□□ 0.77
RTN3-214ENST00000545432 WDR33Q9C0J8 1336 aaKnown RBP19.85■□□□□ 0.77
RTN3-214ENST00000545432 NPHP1O15259 732 aa19.85■□□□□ 0.77
RTN3-214ENST00000545432 ALDH1B1P30837 517 aa19.85■□□□□ 0.77
RTN3-214ENST00000545432 IARSP41252 1262 aaKnown RBP19.85■□□□□ 0.77
RTN3-214ENST00000545432 OLFM4Q6UX06 510 aa19.85■□□□□ 0.77
RTN3-214ENST00000545432 SYNE4Q8N205 404 aa19.85■□□□□ 0.77
RTN3-214ENST00000545432 ZNF652Q9Y2D9 606 aa19.85■□□□□ 0.77
RTN3-214ENST00000545432 NBPF26B4DH59 902 aa19.84■□□□□ 0.77
RTN3-214ENST00000545432 SNRPA1P09661 255 aaKnown RBP19.84■□□□□ 0.77
RTN3-214ENST00000545432 RGS19P49795 217 aa19.84■□□□□ 0.77
RTN3-214ENST00000545432 CRY2Q49AN0 593 aa19.84■□□□□ 0.77
RTN3-214ENST00000545432 MAP1SQ66K74 1059 aaPredicted RBP19.84■□□□□ 0.77
RTN3-214ENST00000545432 NBPF10Q6P3W6 841 aaKnown RBP19.84■□□□□ 0.77
RTN3-214ENST00000545432 NBPF15Q8N660 670 aa19.84■□□□□ 0.77
RTN3-214ENST00000545432 PHACTR3Q96KR7 559 aa19.84■□□□□ 0.77
RTN3-214ENST00000545432 PRAMEF22A3QJZ6 481 aa19.83■□□□□ 0.77
RTN3-214ENST00000545432 DDX21Q9NR30 783 aaKnown RBP eCLIP19.83■□□□□ 0.77
RTN3-214ENST00000545432 CLEC11AQ9Y240 323 aa19.83■□□□□ 0.77
RTN3-214ENST00000545432 RNF123Q5XPI4 1314 aa19.82■□□□□ 0.76
RTN3-214ENST00000545432 PIP4K2AP48426 406 aaPredicted RBP19.82■□□□□ 0.76
RTN3-214ENST00000545432 CC2D2BQ6DHV5 1058 aa19.81■□□□□ 0.76
RTN3-214ENST00000545432 NIP7Q9Y221 180 aaKnown RBP eCLIP19.81■□□□□ 0.76
RTN3-214ENST00000545432 U2SURPO15042 1029 aaKnown RBP19.8■□□□□ 0.76
RTN3-214ENST00000545432 CC2D1BQ5T0F9 858 aaKnown RBP19.8■□□□□ 0.76
RTN3-214ENST00000545432 RSPH6AQ9H0K4 717 aa19.8■□□□□ 0.76
RTN3-214ENST00000545432 CACNA1SQ13698 1873 aa19.79■□□□□ 0.76
RTN3-214ENST00000545432 HOXA10P31260 410 aaPredicted RBP19.79■□□□□ 0.76
RTN3-214ENST00000545432 GRIPAP1Q4V328 841 aa19.79■□□□□ 0.76
RTN3-214ENST00000545432 HLFQ16534 295 aa19.78■□□□□ 0.76
RTN3-214ENST00000545432 JDP2Q8WYK2 163 aa19.78■□□□□ 0.76
RTN3-214ENST00000545432 THSD7BQ9C0I4 1608 aa19.77■□□□□ 0.76
RTN3-214ENST00000545432 PRKAR2BP31323 418 aa19.77■□□□□ 0.76
RTN3-214ENST00000545432 SCNN1DP51172 638 aa19.77■□□□□ 0.76
RTN3-214ENST00000545432 CST9Q5W186 159 aa19.77■□□□□ 0.76
RTN3-214ENST00000545432 COL4A5P29400 1685 aa19.76■□□□□ 0.75
RTN3-214ENST00000545432 HTATSF1O43719 755 aaKnown RBP19.76■□□□□ 0.75
RTN3-214ENST00000545432 FAM161AQ3B820 660 aa19.76■□□□□ 0.75
RTN3-214ENST00000545432 ABT1Q9ULW3 272 aaKnown RBP19.76■□□□□ 0.75
RTN3-214ENST00000545432 RIC1Q4ADV7 1423 aa19.76■□□□□ 0.75
RTN3-214ENST00000545432 ERVV-1B6SEH8 477 aa19.75■□□□□ 0.75
RTN3-214ENST00000545432 EPS15P42566 896 aa19.75■□□□□ 0.75
RTN3-214ENST00000545432 ECE1P42892 770 aa19.75■□□□□ 0.75
RTN3-214ENST00000545432 EIF6P56537 245 aaKnown RBP19.75■□□□□ 0.75
RTN3-214ENST00000545432 USP50Q70EL3 339 aaPredicted RBP19.75■□□□□ 0.75
RTN3-214ENST00000545432 CAPNS2Q96L46 248 aa19.75■□□□□ 0.75
RTN3-214ENST00000545432 LTBP1Q14766 1721 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms