RNA–Protein interactions for RNA: ENST00000545328.6

SEC23A-203, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-203ENST00000545328 ZKSCAN5Q9Y2L8 839 aa20.37■□□□□ 0.85
SEC23A-203ENST00000545328 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.37■□□□□ 0.85
SEC23A-203ENST00000545328 ADCY9O60503 1353 aa20.37■□□□□ 0.85
SEC23A-203ENST00000545328 KCNJ4P48050 445 aa20.36■□□□□ 0.85
SEC23A-203ENST00000545328 COL9A3Q14050 684 aaPredicted RBP20.36■□□□□ 0.85
SEC23A-203ENST00000545328 NECAB1Q8N987 351 aa20.36■□□□□ 0.85
SEC23A-203ENST00000545328 USP25Q9UHP3 1055 aa20.36■□□□□ 0.85
SEC23A-203ENST00000545328 CHMP3Q9Y3E7 222 aa20.36■□□□□ 0.85
SEC23A-203ENST00000545328 STX6O43752 255 aa20.36■□□□□ 0.85
SEC23A-203ENST00000545328 IFIT2P09913 472 aaKnown RBP20.36■□□□□ 0.85
SEC23A-203ENST00000545328 AACSQ86V21 672 aa20.36■□□□□ 0.85
SEC23A-203ENST00000545328 IP6K1Q92551 441 aa20.36■□□□□ 0.85
SEC23A-203ENST00000545328 TTC14Q96N46 770 aa20.36■□□□□ 0.85
SEC23A-203ENST00000545328 CCDC8Q9H0W5 538 aaPredicted RBP20.36■□□□□ 0.85
SEC23A-203ENST00000545328 LIMCH1Q9UPQ0 1083 aa20.36■□□□□ 0.85
SEC23A-203ENST00000545328 VPS37CA5D8V6 355 aaPredicted RBP20.35■□□□□ 0.85
SEC23A-203ENST00000545328 TPM2P07951 284 aa20.35■□□□□ 0.85
SEC23A-203ENST00000545328 ZSCAN22P10073 491 aaPredicted RBP20.35■□□□□ 0.85
SEC23A-203ENST00000545328 HCLS1P14317 486 aaPredicted RBP20.35■□□□□ 0.85
SEC23A-203ENST00000545328 KLHDC4Q8TBB5 520 aa20.35■□□□□ 0.85
SEC23A-203ENST00000545328 PXDNLA1KZ92 1463 aa20.35■□□□□ 0.85
SEC23A-203ENST00000545328 CEMIPQ8WUJ3 1361 aa20.34■□□□□ 0.85
SEC23A-203ENST00000545328 MARF1Q9Y4F3 1742 aaKnown RBP20.34■□□□□ 0.85
SEC23A-203ENST00000545328 GLRX3O76003 335 aaKnown RBP20.33■□□□□ 0.85
SEC23A-203ENST00000545328 GJB2P29033 226 aa20.33■□□□□ 0.85
SEC23A-203ENST00000545328 JARID2Q92833 1246 aaPredicted RBP20.33■□□□□ 0.85
SEC23A-203ENST00000545328 FAM227BQ96M60 508 aa20.33■□□□□ 0.85
SEC23A-203ENST00000545328 CCDC39Q9UFE4 941 aa20.33■□□□□ 0.85
SEC23A-203ENST00000545328 LTN1O94822 1766 aa20.33■□□□□ 0.85
SEC23A-203ENST00000545328 RGPD2P0DJD1 1756 aa20.33■□□□□ 0.85
SEC23A-203ENST00000545328 FAM13BQ9NYF5 915 aa20.33■□□□□ 0.85
SEC23A-203ENST00000545328 DNM1Q05193 864 aaKnown RBP20.33■□□□□ 0.84
SEC23A-203ENST00000545328 C1orf141Q5JVX7 400 aa20.33■□□□□ 0.84
SEC23A-203ENST00000545328 PDRG1Q9NUG6 133 aa20.33■□□□□ 0.84
SEC23A-203ENST00000545328 FERMT3Q86UX7 667 aa20.32■□□□□ 0.84
SEC23A-203ENST00000545328 ECHDC1Q9NTX5 307 aa20.32■□□□□ 0.84
SEC23A-203ENST00000545328 BABAM1Q9NWV8 329 aa20.32■□□□□ 0.84
SEC23A-203ENST00000545328 HS1BP3Q53T59 392 aa20.32■□□□□ 0.84
SEC23A-203ENST00000545328 GIMAP6Q6P9H5 292 aa20.32■□□□□ 0.84
SEC23A-203ENST00000545328 TLR7Q9NYK1 1049 aaKnown RBP20.32■□□□□ 0.84
SEC23A-203ENST00000545328 DBF4Q9UBU7 674 aaPredicted RBP20.32■□□□□ 0.84
SEC23A-203ENST00000545328 F13A1P00488 732 aa20.31■□□□□ 0.84
SEC23A-203ENST00000545328 FAM173BQ6P4H8 233 aa20.31■□□□□ 0.84
SEC23A-203ENST00000545328 C17orf53Q8N3J3 647 aaPredicted RBP20.31■□□□□ 0.84
SEC23A-203ENST00000545328 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.31■□□□□ 0.84
SEC23A-203ENST00000545328 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.31■□□□□ 0.84
SEC23A-203ENST00000545328 PIP4K2AP48426 406 aaPredicted RBP20.31■□□□□ 0.84
SEC23A-203ENST00000545328 HSP90AB4PQ58FF6 505 aa20.31■□□□□ 0.84
SEC23A-203ENST00000545328 BOLA2Q9H3K6 86 aa20.31■□□□□ 0.84
SEC23A-203ENST00000545328 HYPKQ9NX55 129 aa20.31■□□□□ 0.84
SEC23A-203ENST00000545328 ZNF500O60304 480 aaPredicted RBP20.3■□□□□ 0.84
SEC23A-203ENST00000545328 PHF14O94880 888 aa20.3■□□□□ 0.84
SEC23A-203ENST00000545328 MYL6BP14649 208 aa20.3■□□□□ 0.84
SEC23A-203ENST00000545328 SLC39A6Q13433 755 aa20.3■□□□□ 0.84
SEC23A-203ENST00000545328 SUCLG2Q96I99 432 aa20.3■□□□□ 0.84
SEC23A-203ENST00000545328 UQCRHLA0A096LP55 91 aa20.29■□□□□ 0.84
SEC23A-203ENST00000545328 UQCRHP07919 91 aa20.29■□□□□ 0.84
SEC23A-203ENST00000545328 PLEKHO1Q53GL0 409 aaPredicted RBP20.29■□□□□ 0.84
SEC23A-203ENST00000545328 AKAP4Q5JQC9 854 aa20.29■□□□□ 0.84
SEC23A-203ENST00000545328 DNTTIP2Q5QJE6 756 aaKnown RBP20.29■□□□□ 0.84
SEC23A-203ENST00000545328 CCDC9Q9Y3X0 531 aaKnown RBP20.29■□□□□ 0.84
SEC23A-203ENST00000545328 PXDNQ92626 1479 aa20.29■□□□□ 0.84
SEC23A-203ENST00000545328 RNMTO43148 476 aaKnown RBP20.29■□□□□ 0.84
SEC23A-203ENST00000545328 CCDC183Q5T5S1 534 aa20.29■□□□□ 0.84
SEC23A-203ENST00000545328 EDC3Q96F86 508 aaKnown RBP20.29■□□□□ 0.84
SEC23A-203ENST00000545328 BICC1Q9H694 974 aaKnown RBP20.29■□□□□ 0.84
SEC23A-203ENST00000545328 RUFY2Q8WXA3 655 aa20.28■□□□□ 0.84
SEC23A-203ENST00000545328 TTC12Q9H892 705 aaPredicted RBP20.28■□□□□ 0.84
SEC23A-203ENST00000545328 ARHGAP23Q9P227 1491 aa20.28■□□□□ 0.84
SEC23A-203ENST00000545328 CYP46A1Q9Y6A2 500 aa20.28■□□□□ 0.84
SEC23A-203ENST00000545328 NDUFB9Q9Y6M9 179 aa20.28■□□□□ 0.84
SEC23A-203ENST00000545328 SLIT1O75093 1534 aa20.28■□□□□ 0.84
SEC23A-203ENST00000545328 GIGYF1O75420 1035 aaPredicted RBP20.28■□□□□ 0.84
SEC23A-203ENST00000545328 FGD1P98174 961 aa20.28■□□□□ 0.84
SEC23A-203ENST00000545328 NMIQ13287 307 aaPredicted RBP20.28■□□□□ 0.84
SEC23A-203ENST00000545328 ME3Q16798 604 aa20.28■□□□□ 0.84
SEC23A-203ENST00000545328 EAF2Q96CJ1 260 aaPredicted RBP20.28■□□□□ 0.84
SEC23A-203ENST00000545328 ORAI2Q96SN7 254 aa20.28■□□□□ 0.84
SEC23A-203ENST00000545328 RBM8AQ9Y5S9 174 aaKnown RBP20.28■□□□□ 0.84
SEC23A-203ENST00000545328 TAF6LQ9Y6J9 622 aa20.28■□□□□ 0.84
SEC23A-203ENST00000545328 ANKARQ7Z5J8 1434 aa20.27■□□□□ 0.84
SEC23A-203ENST00000545328 TTC41PQ6P2S7 1318 aa20.27■□□□□ 0.84
SEC23A-203ENST00000545328 STK3Q13188 491 aa20.27■□□□□ 0.84
SEC23A-203ENST00000545328 GPATCH3Q96I76 525 aa20.27■□□□□ 0.84
SEC23A-203ENST00000545328 KSR2Q6VAB6 950 aa20.27■□□□□ 0.84
SEC23A-203ENST00000545328 ST3GAL1Q11201 340 aa20.26■□□□□ 0.83
SEC23A-203ENST00000545328 IL17RAQ96F46 866 aa20.26■□□□□ 0.83
SEC23A-203ENST00000545328 SASH1O94885 1247 aa20.26■□□□□ 0.83
SEC23A-203ENST00000545328 ADCY5O95622 1261 aa20.26■□□□□ 0.83
SEC23A-203ENST00000545328 N4BP2Q86UW6 1770 aaPredicted RBP20.26■□□□□ 0.83
SEC23A-203ENST00000545328 UBE2HP62256 183 aa20.26■□□□□ 0.83
SEC23A-203ENST00000545328 G3BP1Q13283 466 aaKnown RBP eCLIP20.26■□□□□ 0.832e-7■■■□□ 15.2
SEC23A-203ENST00000545328 FSD1Q9BTV5 496 aa20.26■□□□□ 0.83
SEC23A-203ENST00000545328 MTMR6Q9Y217 621 aa20.26■□□□□ 0.83
SEC23A-203ENST00000545328 CCDC171Q6TFL3 1326 aa20.25■□□□□ 0.83
SEC23A-203ENST00000545328 A0A0D9SFI3 127 aa20.25■□□□□ 0.83
SEC23A-203ENST00000545328 ANKRD24Q8TF21 1146 aa20.25■□□□□ 0.83
SEC23A-203ENST00000545328 KAZALD1Q96I82 304 aa20.25■□□□□ 0.83
SEC23A-203ENST00000545328 TPCN1Q9ULQ1 816 aa20.25■□□□□ 0.83
SEC23A-203ENST00000545328 ZKSCAN1P17029 563 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms