RNA–Protein interactions for RNA: ENST00000545279.5

SMAD5-211, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD5, Length 7,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-211ENST00000545279 SUPT20HL1Q3ZLR7 823 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 SLKQ9H2G2 1235 aaPredicted RBP7.78□□□□□ -1.16
SMAD5-211ENST00000545279 EDC4Q6P2E9 1401 aaKnown RBP7.78□□□□□ -1.16
SMAD5-211ENST00000545279 ITSN2Q9NZM3 1697 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 IQCA1Q86XH1 822 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 ADAMTS8Q9UP79 889 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 TCOF1Q13428 1488 aaKnown RBP7.78□□□□□ -1.16
SMAD5-211ENST00000545279 CCNA1P78396 465 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 CTCFLQ8NI51 663 aaPredicted RBP7.78□□□□□ -1.16
SMAD5-211ENST00000545279 TAOK3Q9H2K8 898 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 ADGRL3Q9HAR2 1447 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 ERVK-7P63135 1459 aa7.77□□□□□ -1.17
SMAD5-211ENST00000545279 NFATC2IPQ8NCF5 419 aa7.77□□□□□ -1.17
SMAD5-211ENST00000545279 TSR1Q2NL82 804 aaKnown RBP7.77□□□□□ -1.17
SMAD5-211ENST00000545279 XAGE3Q8WTP9 111 aa7.77□□□□□ -1.17
SMAD5-211ENST00000545279 COG6Q9Y2V7 657 aa7.77□□□□□ -1.17
SMAD5-211ENST00000545279 TARBP1Q13395 1621 aaKnown RBP7.77□□□□□ -1.17
SMAD5-211ENST00000545279 KRT32Q14532 448 aa7.77□□□□□ -1.17
SMAD5-211ENST00000545279 SMCR8Q8TEV9 937 aaPredicted RBP7.77□□□□□ -1.17
SMAD5-211ENST00000545279 GPHNQ9NQX3 736 aaPredicted RBP7.77□□□□□ -1.17
SMAD5-211ENST00000545279 ABCC1P33527 1531 aa7.77□□□□□ -1.17
SMAD5-211ENST00000545279 KIAA0232Q92628 1395 aa7.77□□□□□ -1.17
SMAD5-211ENST00000545279 TPM1P09493 284 aa7.77□□□□□ -1.17
SMAD5-211ENST00000545279 IL15P40933 162 aaPredicted RBP7.77□□□□□ -1.17
SMAD5-211ENST00000545279 IMMTQ16891 758 aaKnown RBP7.77□□□□□ -1.17
SMAD5-211ENST00000545279 CCDC196A0A1B0GTZ2 297 aa7.77□□□□□ -1.17
SMAD5-211ENST00000545279 BMS1Q14692 1282 aaKnown RBP7.77□□□□□ -1.17
SMAD5-211ENST00000545279 ALDH1L2Q3SY69 923 aa7.77□□□□□ -1.17
SMAD5-211ENST00000545279 TPRNQ4KMQ1 711 aa7.77□□□□□ -1.17
SMAD5-211ENST00000545279 TMEM106CQ9BVX2 250 aa7.77□□□□□ -1.17
SMAD5-211ENST00000545279 NAPBQ9H115 298 aa7.77□□□□□ -1.17
SMAD5-211ENST00000545279 IRX3P78415 501 aaPredicted RBP7.76□□□□□ -1.17
SMAD5-211ENST00000545279 R3HDM1Q15032 1099 aaKnown RBP7.76□□□□□ -1.17
SMAD5-211ENST00000545279 KSR2Q6VAB6 950 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 APBB1IPQ7Z5R6 666 aaPredicted RBP7.76□□□□□ -1.17
SMAD5-211ENST00000545279 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.76□□□□□ -1.17
SMAD5-211ENST00000545279 DENND2AQ9ULE3 1009 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 LOC102724428A0A0B4J2F2 783 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 SIK1P57059 783 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 EIF4A2Q14240 407 aaKnown RBP7.76□□□□□ -1.17
SMAD5-211ENST00000545279 TXNRD1Q16881 649 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 MCTP1Q6DN14 999 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 RIMBP2O15034 1052 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 ZNF526Q8TF50 670 aaPredicted RBP7.76□□□□□ -1.17
SMAD5-211ENST00000545279 GBP4Q96PP9 640 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 PSDA5PKW4 1024 aaPredicted RBP7.76□□□□□ -1.17
SMAD5-211ENST00000545279 COPS6Q7L5N1 327 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 EYA1Q99502 592 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 ATP2B4P23634 1241 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 HOXD10P28358 340 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 CHMP4BP1P59074 171 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 FLIIQ13045 1269 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 ATP2B3Q16720 1220 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 KIF1BPQ96EK5 621 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 GTF3C3Q9Y5Q9 886 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 PTPRCP08575 1304 aa7.76□□□□□ -1.17
SMAD5-211ENST00000545279 IL16Q14005 1332 aa7.75□□□□□ -1.17
SMAD5-211ENST00000545279 NBR1Q14596 966 aa7.75□□□□□ -1.17
SMAD5-211ENST00000545279 CCDC174Q6PII3 467 aa7.75□□□□□ -1.17
SMAD5-211ENST00000545279 UBE3BQ7Z3V4 1068 aa7.75□□□□□ -1.17
SMAD5-211ENST00000545279 LINS1Q8NG48 757 aa7.75□□□□□ -1.17
SMAD5-211ENST00000545279 LDHBP07195 334 aaKnown RBP7.75□□□□□ -1.17
SMAD5-211ENST00000545279 PIP4K2AP48426 406 aaPredicted RBP7.75□□□□□ -1.17
SMAD5-211ENST00000545279 SLC52A2Q9HAB3 445 aa7.75□□□□□ -1.17
SMAD5-211ENST00000545279 FAM135BQ49AJ0 1406 aa7.75□□□□□ -1.17
SMAD5-211ENST00000545279 ECE1P42892 770 aa7.75□□□□□ -1.17
SMAD5-211ENST00000545279 RNF181Q9P0P0 153 aa7.75□□□□□ -1.17
SMAD5-211ENST00000545279 ARHGEF12Q9NZN5 1544 aa7.75□□□□□ -1.17
SMAD5-211ENST00000545279 CENPQQ7L2Z9 268 aaPredicted RBP7.75□□□□□ -1.17
SMAD5-211ENST00000545279 COL17A1Q9UMD9 1497 aaPredicted RBP7.75□□□□□ -1.17
SMAD5-211ENST00000545279 CDC45O75419 566 aa7.75□□□□□ -1.17
SMAD5-211ENST00000545279 KIF5BP33176 963 aa7.75□□□□□ -1.17
SMAD5-211ENST00000545279 SLC39A6Q13433 755 aa7.75□□□□□ -1.17
SMAD5-211ENST00000545279 DDX17Q92841 729 aaKnown RBP7.75□□□□□ -1.17
SMAD5-211ENST00000545279 KIF24Q5T7B8 1368 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.74□□□□□ -1.17
SMAD5-211ENST00000545279 BBOX1O75936 387 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 SERPINB2P05120 415 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 ZFYP08048 801 aaPredicted RBP7.74□□□□□ -1.17
SMAD5-211ENST00000545279 KDM5CP41229 1560 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 EN1Q05925 392 aaPredicted RBP7.74□□□□□ -1.17
SMAD5-211ENST00000545279 DNAJC10Q8IXB1 793 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 WDR66Q8TBY9 1149 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 RIMBP3CA6NJZ7 1639 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 RIMBP3BA6NNM3 1639 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 RIMBP3Q9UFD9 1639 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 PLEKHH1Q9ULM0 1364 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 ATP5J2-PTCD1G3V325 749 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 NCBP1Q09161 790 aaKnown RBP7.74□□□□□ -1.17
SMAD5-211ENST00000545279 DRC1Q96MC2 740 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 MAP3K2Q9Y2U5 619 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 F8W031 263 aaPredicted RBP7.74□□□□□ -1.17
SMAD5-211ENST00000545279 TPM3P06753 285 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 RAB34Q9BZG1 259 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 UNC13AQ9UPW8 1703 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 PDE8AO60658 829 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 ZBTB7AO95365 584 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 ANKRD1Q15327 319 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 PLBD2Q8NHP8 589 aa7.74□□□□□ -1.17
SMAD5-211ENST00000545279 IREB2P48200 963 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms