RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 AK7Q96M32 723 aa9.8□□□□□ -0.84
CPSF7-224ENST00000544990 PDGFDQ9GZP0 370 aaPredicted RBP9.8□□□□□ -0.84
CPSF7-224ENST00000544990 RSPH6AQ9H0K4 717 aa9.8□□□□□ -0.84
CPSF7-224ENST00000544990 PNNQ9H307 717 aaKnown RBP9.8□□□□□ -0.84
CPSF7-224ENST00000544990 SLC52A2Q9HAB3 445 aa9.8□□□□□ -0.84
CPSF7-224ENST00000544990 LGR6Q9HBX8 967 aa9.8□□□□□ -0.84
CPSF7-224ENST00000544990 EVI5O60447 810 aa9.79□□□□□ -0.84
CPSF7-224ENST00000544990 TUBGCP6Q96RT7 1819 aa9.79□□□□□ -0.84
CPSF7-224ENST00000544990 PNPLA7Q6ZV29 1317 aa9.79□□□□□ -0.84
CPSF7-224ENST00000544990 MYBBP1AQ9BQG0 1328 aaKnown RBP9.79□□□□□ -0.84
CPSF7-224ENST00000544990 C4BP0C0L5 1744 aa9.79□□□□□ -0.84
CPSF7-224ENST00000544990 MAP3K5Q99683 1374 aa9.78□□□□□ -0.84
CPSF7-224ENST00000544990 ZNF831Q5JPB2 1677 aa9.78□□□□□ -0.84
CPSF7-224ENST00000544990 TEFQ10587 303 aa9.78□□□□□ -0.84
CPSF7-224ENST00000544990 PTCD2Q8WV60 388 aaKnown RBP9.78□□□□□ -0.84
CPSF7-224ENST00000544990 PHACTR3Q96KR7 559 aa9.78□□□□□ -0.84
CPSF7-224ENST00000544990 PTCD1O75127 700 aaKnown RBP9.77□□□□□ -0.85
CPSF7-224ENST00000544990 POLD1P28340 1107 aa9.77□□□□□ -0.85
CPSF7-224ENST00000544990 PTGER2P43116 358 aa9.77□□□□□ -0.85
CPSF7-224ENST00000544990 ITPK1Q13572 414 aa9.77□□□□□ -0.85
CPSF7-224ENST00000544990 NEUROD2Q15784 382 aa9.77□□□□□ -0.85
CPSF7-224ENST00000544990 TMEM132AQ24JP5 1023 aa9.77□□□□□ -0.85
CPSF7-224ENST00000544990 COL23A1Q86Y22 540 aaPredicted RBP9.77□□□□□ -0.85
CPSF7-224ENST00000544990 RTF1Q92541 710 aaKnown RBP9.77□□□□□ -0.85
CPSF7-224ENST00000544990 ADAMTS7Q9UKP4 1686 aa9.77□□□□□ -0.85
CPSF7-224ENST00000544990 SLC34A2O95436 690 aa9.76□□□□□ -0.85
CPSF7-224ENST00000544990 SSFA2P28290 1259 aa9.76□□□□□ -0.85
CPSF7-224ENST00000544990 RC3H1Q5TC82 1133 aaKnown RBP9.76□□□□□ -0.85
CPSF7-224ENST00000544990 TTC5Q8N0Z6 440 aa9.76□□□□□ -0.85
CPSF7-224ENST00000544990 LINC00116Q8NCU8 138 aa9.76□□□□□ -0.85
CPSF7-224ENST00000544990 IL17REQ8NFR9 667 aa9.76□□□□□ -0.85
CPSF7-224ENST00000544990 DDX12PQ92771 950 aa9.76□□□□□ -0.85
CPSF7-224ENST00000544990 PRKRIP1Q9H875 184 aaPredicted RBP9.76□□□□□ -0.85
CPSF7-224ENST00000544990 MRC1P22897 1456 aa9.76□□□□□ -0.85
CPSF7-224ENST00000544990 UBR3Q6ZT12 1888 aa9.76□□□□□ -0.85
CPSF7-224ENST00000544990 GNPATO15228 680 aa9.75□□□□□ -0.85
CPSF7-224ENST00000544990 HTATSF1O43719 755 aaKnown RBP9.75□□□□□ -0.85
CPSF7-224ENST00000544990 PHF14O94880 888 aa9.75□□□□□ -0.85
CPSF7-224ENST00000544990 SLC39A6Q13433 755 aa9.75□□□□□ -0.85
CPSF7-224ENST00000544990 SLC4A9Q96Q91 983 aa9.75□□□□□ -0.85
CPSF7-224ENST00000544990 ARXQ96QS3 562 aa9.75□□□□□ -0.85
CPSF7-224ENST00000544990 RTCBQ9Y3I0 505 aaKnown RBP9.75□□□□□ -0.85
CPSF7-224ENST00000544990 MAPK8IP3Q9UPT6 1336 aa9.75□□□□□ -0.85
CPSF7-224ENST00000544990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.74□□□□□ -0.85
CPSF7-224ENST00000544990 TRAPPC3LQ5T215 181 aa9.74□□□□□ -0.85
CPSF7-224ENST00000544990 CNTNAP4Q9C0A0 1308 aa9.74□□□□□ -0.85
CPSF7-224ENST00000544990 COL5A3P25940 1745 aaPredicted RBP9.73□□□□□ -0.85
CPSF7-224ENST00000544990 COL24A1Q17RW2 1714 aa9.73□□□□□ -0.85
CPSF7-224ENST00000544990 BTBD11A6QL63 1104 aa9.73□□□□□ -0.85
CPSF7-224ENST00000544990 RPS6KA4O75676 772 aa9.73□□□□□ -0.85
CPSF7-224ENST00000544990 BRPF1P55201 1214 aaPredicted RBP9.73□□□□□ -0.85
CPSF7-224ENST00000544990 WDR43Q15061 677 aaKnown RBP eCLIP9.73□□□□□ -0.85
CPSF7-224ENST00000544990 ZNF790Q6PG37 636 aa9.73□□□□□ -0.85
CPSF7-224ENST00000544990 PLEKHF1Q96S99 279 aa9.73□□□□□ -0.85
CPSF7-224ENST00000544990 DLG5Q8TDM6 1919 aa9.73□□□□□ -0.85
CPSF7-224ENST00000544990 CEMIPQ8WUJ3 1361 aa9.73□□□□□ -0.85
CPSF7-224ENST00000544990 SIPA1L3O60292 1781 aaPredicted RBP9.73□□□□□ -0.85
CPSF7-224ENST00000544990 CICQ96RK0 1608 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-224ENST00000544990 OSBPP22059 807 aa9.72□□□□□ -0.85
CPSF7-224ENST00000544990 CRKLP46109 303 aaKnown RBP9.72□□□□□ -0.85
CPSF7-224ENST00000544990 NFE2L2Q16236 605 aa9.72□□□□□ -0.85
CPSF7-224ENST00000544990 MCM10Q7L590 875 aa9.72□□□□□ -0.85
CPSF7-224ENST00000544990 DNAJC10Q8IXB1 793 aa9.72□□□□□ -0.85
CPSF7-224ENST00000544990 TEX13AQ9BXU3 409 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-224ENST00000544990 MYH14Q7Z406 1995 aaKnown RBP9.72□□□□□ -0.85
CPSF7-224ENST00000544990 TJP1Q07157 1748 aa9.71□□□□□ -0.85
CPSF7-224ENST00000544990 UBR2Q8IWV8 1755 aa9.71□□□□□ -0.85
CPSF7-224ENST00000544990 STARD3NLO95772 234 aa9.71□□□□□ -0.86
CPSF7-224ENST00000544990 RFC4P35249 363 aa9.71□□□□□ -0.86
CPSF7-224ENST00000544990 MSL1Q68DK7 614 aa9.71□□□□□ -0.86
CPSF7-224ENST00000544990 SMIM5Q71RC9 77 aa9.71□□□□□ -0.86
CPSF7-224ENST00000544990 FMNL2Q96PY5 1086 aa9.71□□□□□ -0.86
CPSF7-224ENST00000544990 SYT17Q9BSW7 474 aa9.71□□□□□ -0.86
CPSF7-224ENST00000544990 FHDC1Q9C0D6 1143 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-224ENST00000544990 DAXXQ9UER7 740 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-224ENST00000544990 KCPQ6ZWJ8 1503 aa9.71□□□□□ -0.86
CPSF7-224ENST00000544990 ANP32CO43423 234 aa9.7□□□□□ -0.86
CPSF7-224ENST00000544990 CYP19A1P11511 503 aaPredicted RBP9.7□□□□□ -0.86
CPSF7-224ENST00000544990 DCTN1Q14203 1278 aa9.7□□□□□ -0.86
CPSF7-224ENST00000544990 TAF7Q15545 349 aaPredicted RBP9.7□□□□□ -0.86
CPSF7-224ENST00000544990 AMIGO3Q86WK7 504 aa9.7□□□□□ -0.86
CPSF7-224ENST00000544990 NLGN1Q8N2Q7 840 aa9.7□□□□□ -0.86
CPSF7-224ENST00000544990 PNISRQ8TF01 805 aaKnown RBP9.7□□□□□ -0.86
CPSF7-224ENST00000544990 ZNF496Q96IT1 587 aaPredicted RBP9.7□□□□□ -0.86
CPSF7-224ENST00000544990 CCDC87Q9NVE4 849 aa9.7□□□□□ -0.86
CPSF7-224ENST00000544990 RIPK4P57078 832 aa9.69□□□□□ -0.86
CPSF7-224ENST00000544990 LMOD3Q0VAK6 560 aa9.69□□□□□ -0.86
CPSF7-224ENST00000544990 INTS5Q6P9B9 1019 aaKnown RBP9.69□□□□□ -0.86
CPSF7-224ENST00000544990 RUNDC1Q96C34 613 aa9.69□□□□□ -0.86
CPSF7-224ENST00000544990 EPAS1Q99814 870 aa9.69□□□□□ -0.86
CPSF7-224ENST00000544990 HEG1Q9ULI3 1381 aa9.69□□□□□ -0.86
CPSF7-224ENST00000544990 ZPR1O75312 459 aa9.68□□□□□ -0.86
CPSF7-224ENST00000544990 MAMSTRQ6ZN01 415 aa9.68□□□□□ -0.86
CPSF7-224ENST00000544990 NPM2Q86SE8 214 aaKnown RBP9.68□□□□□ -0.86
CPSF7-224ENST00000544990 SCUBE2Q9NQ36 999 aa9.68□□□□□ -0.86
CPSF7-224ENST00000544990 ADAMTS8Q9UP79 889 aa9.68□□□□□ -0.86
CPSF7-224ENST00000544990 PCDHGA4Q9Y5G9 962 aa9.68□□□□□ -0.86
CPSF7-224ENST00000544990 A0A087WZG4 1122 aa9.67□□□□□ -0.86
CPSF7-224ENST00000544990 RIMBP2O15034 1052 aa9.67□□□□□ -0.86
CPSF7-224ENST00000544990 KCNQ3O43525 872 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms