RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 CLSPNQ9HAW4 1339 aa19.75■□□□□ 0.75
COPS7A-220ENST00000544725 VIRMAQ69YN4 1812 aaKnown RBP19.74■□□□□ 0.75
COPS7A-220ENST00000544725 CAMTA2O94983 1202 aa19.74■□□□□ 0.75
COPS7A-220ENST00000544725 TRIM26Q12899 539 aaPredicted RBP19.74■□□□□ 0.75
COPS7A-220ENST00000544725 VEGFBP49765 207 aa19.73■□□□□ 0.75
COPS7A-220ENST00000544725 CCDC93Q567U6 631 aa19.73■□□□□ 0.75
COPS7A-220ENST00000544725 FMNL2Q96PY5 1086 aa19.72■□□□□ 0.75
COPS7A-220ENST00000544725 SLX4Q8IY92 1834 aa19.72■□□□□ 0.75
COPS7A-220ENST00000544725 GNAT3A8MTJ3 354 aa19.71■□□□□ 0.75
COPS7A-220ENST00000544725 A1BGP04217 495 aa19.71■□□□□ 0.75
COPS7A-220ENST00000544725 EAPPQ56P03 285 aaPredicted RBP19.71■□□□□ 0.75
COPS7A-220ENST00000544725 IL17REQ8NFR9 667 aa19.71■□□□□ 0.75
COPS7A-220ENST00000544725 GAS2L2Q8NHY3 880 aa19.71■□□□□ 0.75
COPS7A-220ENST00000544725 SCN4AP35499 1836 aa19.7■□□□□ 0.74
COPS7A-220ENST00000544725 ITGBL1O95965 494 aaPredicted RBP19.7■□□□□ 0.74
COPS7A-220ENST00000544725 DZIP3Q86Y13 1208 aaKnown RBP19.7■□□□□ 0.74
COPS7A-220ENST00000544725 C7orf43Q8WVR3 580 aa19.7■□□□□ 0.74
COPS7A-220ENST00000544725 WBP1LQ9NX94 342 aa19.7■□□□□ 0.74
COPS7A-220ENST00000544725 HACL1Q9UJ83 578 aa19.7■□□□□ 0.74
COPS7A-220ENST00000544725 CLEC11AQ9Y240 323 aa19.7■□□□□ 0.74
COPS7A-220ENST00000544725 FKBP4Q02790 459 aaKnown RBP eCLIP19.69■□□□□ 0.74
COPS7A-220ENST00000544725 NBPF5PQ86XG9 351 aaPredicted RBP19.69■□□□□ 0.74
COPS7A-220ENST00000544725 NPR1P16066 1061 aa19.68■□□□□ 0.74
COPS7A-220ENST00000544725 LBX1P52954 281 aa19.68■□□□□ 0.74
COPS7A-220ENST00000544725 ARFGEF2Q9Y6D5 1785 aa19.67■□□□□ 0.74
COPS7A-220ENST00000544725 EPHX2P34913 555 aa19.67■□□□□ 0.74
COPS7A-220ENST00000544725 CLEC4GQ6UXB4 293 aa19.67■□□□□ 0.74
COPS7A-220ENST00000544725 PNMA8AQ86V59 439 aaPredicted RBP19.67■□□□□ 0.74
COPS7A-220ENST00000544725 RTKN2Q8IZC4 609 aa19.67■□□□□ 0.74
COPS7A-220ENST00000544725 ZNF277Q9NRM2 450 aaPredicted RBP19.67■□□□□ 0.74
COPS7A-220ENST00000544725 ZNF652Q9Y2D9 606 aa19.67■□□□□ 0.74
COPS7A-220ENST00000544725 ZNF541Q9H0D2 1346 aa19.67■□□□□ 0.74
COPS7A-220ENST00000544725 RASSF10A6NK89 507 aa19.66■□□□□ 0.74
COPS7A-220ENST00000544725 DEFB115Q30KQ5 88 aa19.66■□□□□ 0.74
COPS7A-220ENST00000544725 CACNA1SQ13698 1873 aa19.65■□□□□ 0.74
COPS7A-220ENST00000544725 KLRG2A4D1S0 409 aaPredicted RBP19.65■□□□□ 0.74
COPS7A-220ENST00000544725 U2SURPO15042 1029 aaKnown RBP19.65■□□□□ 0.74
COPS7A-220ENST00000544725 BTBD11A6QL63 1104 aa19.64■□□□□ 0.73
COPS7A-220ENST00000544725 MAP2K1Q02750 393 aaPredicted RBP19.64■□□□□ 0.73
COPS7A-220ENST00000544725 TPTE2Q6XPS3 522 aa19.64■□□□□ 0.73
COPS7A-220ENST00000544725 CNTROBQ8N137 903 aa19.64■□□□□ 0.73
COPS7A-220ENST00000544725 BCORQ6W2J9 1755 aa19.63■□□□□ 0.73
COPS7A-220ENST00000544725 CEMIPQ8WUJ3 1361 aa19.63■□□□□ 0.73
COPS7A-220ENST00000544725 HSPA8P11142 646 aaKnown RBP19.63■□□□□ 0.73
COPS7A-220ENST00000544725 MAP1SQ66K74 1059 aaPredicted RBP19.63■□□□□ 0.73
COPS7A-220ENST00000544725 SIPA1L3O60292 1781 aaPredicted RBP19.62■□□□□ 0.73
COPS7A-220ENST00000544725 RNF123Q5XPI4 1314 aa19.62■□□□□ 0.73
COPS7A-220ENST00000544725 WDR33Q9C0J8 1336 aaKnown RBP19.62■□□□□ 0.73
COPS7A-220ENST00000544725 FZD9O00144 591 aa19.62■□□□□ 0.73
COPS7A-220ENST00000544725 KCNQ3O43525 872 aa19.62■□□□□ 0.73
COPS7A-220ENST00000544725 ALDH1B1P30837 517 aa19.62■□□□□ 0.73
COPS7A-220ENST00000544725 IARSP41252 1262 aaKnown RBP19.62■□□□□ 0.73
COPS7A-220ENST00000544725 CC2D1BQ5T0F9 858 aaKnown RBP19.62■□□□□ 0.73
COPS7A-220ENST00000544725 GPC2Q8N158 579 aa19.62■□□□□ 0.73
COPS7A-220ENST00000544725 ABHD8Q96I13 439 aa19.62■□□□□ 0.73
COPS7A-220ENST00000544725 USP16Q9Y5T5 823 aa19.62■□□□□ 0.73
COPS7A-220ENST00000544725 RGL2O15211 777 aa19.61■□□□□ 0.73
COPS7A-220ENST00000544725 SLC34A2O95436 690 aa19.61■□□□□ 0.73
COPS7A-220ENST00000544725 PIP4K2AP48426 406 aaPredicted RBP19.61■□□□□ 0.73
COPS7A-220ENST00000544725 OLFM4Q6UX06 510 aa19.61■□□□□ 0.73
COPS7A-220ENST00000544725 PCGF6Q9BYE7 350 aa19.61■□□□□ 0.73
COPS7A-220ENST00000544725 ABT1Q9ULW3 272 aaKnown RBP19.61■□□□□ 0.73
COPS7A-220ENST00000544725 NIP7Q9Y221 180 aaKnown RBP eCLIP19.61■□□□□ 0.73
COPS7A-220ENST00000544725 ADAMTSL1Q8N6G6 1762 aa19.6■□□□□ 0.73
COPS7A-220ENST00000544725 SYNE4Q8N205 404 aa19.6■□□□□ 0.73
COPS7A-220ENST00000544725 JDP2Q8WYK2 163 aa19.6■□□□□ 0.73
COPS7A-220ENST00000544725 COL3A1P02461 1466 aaPredicted RBP19.6■□□□□ 0.73
COPS7A-220ENST00000544725 KIF7Q2M1P5 1343 aa19.59■□□□□ 0.73
COPS7A-220ENST00000544725 PER1O15534 1290 aaPredicted RBP19.59■□□□□ 0.73
COPS7A-220ENST00000544725 SNRPA1P09661 255 aaKnown RBP19.59■□□□□ 0.73
COPS7A-220ENST00000544725 GTF2E1P29083 439 aaPredicted RBP19.58■□□□□ 0.72
COPS7A-220ENST00000544725 PSMD1Q99460 953 aa19.58■□□□□ 0.72
COPS7A-220ENST00000544725 DDX21Q9NR30 783 aaKnown RBP eCLIP19.58■□□□□ 0.72
COPS7A-220ENST00000544725 FAM177BA6PVY3 158 aa19.57■□□□□ 0.72
COPS7A-220ENST00000544725 LMOD1P29536 600 aaPredicted RBP19.57■□□□□ 0.72
COPS7A-220ENST00000544725 EIF6P56537 245 aaKnown RBP19.57■□□□□ 0.72
COPS7A-220ENST00000544725 FAM161AQ3B820 660 aa19.57■□□□□ 0.72
COPS7A-220ENST00000544725 BEGAINQ9BUH8 593 aa19.57■□□□□ 0.72
COPS7A-220ENST00000544725 PRAMEF22A3QJZ6 481 aa19.56■□□□□ 0.72
COPS7A-220ENST00000544725 ECE1P42892 770 aa19.56■□□□□ 0.72
COPS7A-220ENST00000544725 CC2D2BQ6DHV5 1058 aa19.56■□□□□ 0.72
COPS7A-220ENST00000544725 GJA3Q9Y6H8 435 aa19.56■□□□□ 0.72
COPS7A-220ENST00000544725 PAXIP1Q6ZW49 1069 aaPredicted RBP19.55■□□□□ 0.72
COPS7A-220ENST00000544725 PHACTR3Q96KR7 559 aa19.55■□□□□ 0.72
COPS7A-220ENST00000544725 PRKAR2BP31323 418 aa19.54■□□□□ 0.72
COPS7A-220ENST00000544725 RTF1Q92541 710 aaKnown RBP19.54■□□□□ 0.72
COPS7A-220ENST00000544725 CAPNS2Q96L46 248 aa19.54■□□□□ 0.72
COPS7A-220ENST00000544725 NBPF26B4DH59 902 aa19.53■□□□□ 0.72
COPS7A-220ENST00000544725 NBPF10Q6P3W6 841 aaKnown RBP19.53■□□□□ 0.72
COPS7A-220ENST00000544725 NBPF15Q8N660 670 aa19.53■□□□□ 0.72
COPS7A-220ENST00000544725 NYXQ9GZU5 481 aa19.53■□□□□ 0.72
COPS7A-220ENST00000544725 NPC1L1Q9UHC9 1359 aa19.53■□□□□ 0.72
COPS7A-220ENST00000544725 SNED1Q8TER0 1413 aa19.52■□□□□ 0.72
COPS7A-220ENST00000544725 CRY2Q49AN0 593 aa19.52■□□□□ 0.72
COPS7A-220ENST00000544725 GRIPAP1Q4V328 841 aa19.52■□□□□ 0.72
COPS7A-220ENST00000544725 GPR101Q96P66 508 aaPredicted RBP19.52■□□□□ 0.72
COPS7A-220ENST00000544725 RSPH6AQ9H0K4 717 aa19.52■□□□□ 0.72
COPS7A-220ENST00000544725 CCDC85CA6NKD9 419 aa19.51■□□□□ 0.71
COPS7A-220ENST00000544725 MLLT1Q03111 559 aaPredicted RBP19.51■□□□□ 0.71
COPS7A-220ENST00000544725 CNGB1Q14028 1251 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms