RNA–Protein interactions for RNA: ENST00000544539.5

PHC1-213, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-213ENST00000544539 LTBP3Q9NS15 1303 aa18.56■□□□□ 0.56
PHC1-213ENST00000544539 NFKBIEO00221 500 aa18.56■□□□□ 0.56
PHC1-213ENST00000544539 TPTE2Q6XPS3 522 aa18.56■□□□□ 0.56
PHC1-213ENST00000544539 PNISRQ8TF01 805 aaKnown RBP18.56■□□□□ 0.56
PHC1-213ENST00000544539 ZNF219Q9P2Y4 722 aaPredicted RBP18.55■□□□□ 0.56
PHC1-213ENST00000544539 USP16Q9Y5T5 823 aa18.55■□□□□ 0.56
PHC1-213ENST00000544539 SRGNP10124 158 aa18.54■□□□□ 0.56
PHC1-213ENST00000544539 TAF7Q15545 349 aaPredicted RBP18.54■□□□□ 0.56
PHC1-213ENST00000544539 MCM10Q7L590 875 aa18.54■□□□□ 0.56
PHC1-213ENST00000544539 GTF2E1P29083 439 aaPredicted RBP18.53■□□□□ 0.56
PHC1-213ENST00000544539 JMYQ8N9B5 988 aa18.53■□□□□ 0.56
PHC1-213ENST00000544539 KCNQ3O43525 872 aa18.52■□□□□ 0.56
PHC1-213ENST00000544539 NPR1P16066 1061 aa18.52■□□□□ 0.56
PHC1-213ENST00000544539 PRPF40BQ6NWY9 871 aaKnown RBP18.52■□□□□ 0.56
PHC1-213ENST00000544539 IQCA1LA6NCM1 817 aa18.51■□□□□ 0.55
PHC1-213ENST00000544539 CCDC93Q567U6 631 aa18.51■□□□□ 0.55
PHC1-213ENST00000544539 CCDC24Q8N4L8 307 aa18.51■□□□□ 0.55
PHC1-213ENST00000544539 NIP7Q9Y221 180 aaKnown RBP eCLIP18.51■□□□□ 0.55
PHC1-213ENST00000544539 TIAM2Q8IVF5 1701 aa18.51■□□□□ 0.55
PHC1-213ENST00000544539 ALDH1B1P30837 517 aa18.5■□□□□ 0.55
PHC1-213ENST00000544539 NYXQ9GZU5 481 aa18.5■□□□□ 0.55
PHC1-213ENST00000544539 ANKRD31Q8N7Z5 1873 aa18.5■□□□□ 0.55
PHC1-213ENST00000544539 PRELPP51888 382 aa18.49■□□□□ 0.55
PHC1-213ENST00000544539 RTKN2Q8IZC4 609 aa18.49■□□□□ 0.55
PHC1-213ENST00000544539 CCDC88AQ3V6T2 1871 aa18.49■□□□□ 0.55
PHC1-213ENST00000544539 BCORQ6W2J9 1755 aa18.48■□□□□ 0.55
PHC1-213ENST00000544539 MAPK8IP3Q9UPT6 1336 aa18.48■□□□□ 0.55
PHC1-213ENST00000544539 PIP4K2AP48426 406 aaPredicted RBP18.47■□□□□ 0.55
PHC1-213ENST00000544539 HTRA3P83110 453 aa18.47■□□□□ 0.55
PHC1-213ENST00000544539 KIF6Q6ZMV9 814 aa18.47■□□□□ 0.55
PHC1-213ENST00000544539 FER1L6Q2WGJ9 1857 aa18.47■□□□□ 0.55
PHC1-213ENST00000544539 DICER1Q9UPY3 1922 aaKnown RBP18.47■□□□□ 0.55
PHC1-213ENST00000544539 DCTN1Q14203 1278 aa18.46■□□□□ 0.55
PHC1-213ENST00000544539 CHADLQ6NUI6 762 aa18.46■□□□□ 0.55
PHC1-213ENST00000544539 COL11A2P13942 1736 aaPredicted RBP18.46■□□□□ 0.55
PHC1-213ENST00000544539 PRAMEF22A3QJZ6 481 aa18.45■□□□□ 0.54
PHC1-213ENST00000544539 KLRG2A4D1S0 409 aaPredicted RBP18.45■□□□□ 0.54
PHC1-213ENST00000544539 ERVV-1B6SEH8 477 aa18.45■□□□□ 0.54
PHC1-213ENST00000544539 FKBP4Q02790 459 aaKnown RBP eCLIP18.45■□□□□ 0.54
PHC1-213ENST00000544539 GRIPAP1Q4V328 841 aa18.45■□□□□ 0.54
PHC1-213ENST00000544539 CC2D2BQ6DHV5 1058 aa18.44■□□□□ 0.54
PHC1-213ENST00000544539 TMX4Q9H1E5 349 aaPredicted RBP18.44■□□□□ 0.54
PHC1-213ENST00000544539 ARFGEF2Q9Y6D5 1785 aa18.44■□□□□ 0.54
PHC1-213ENST00000544539 FAM177BA6PVY3 158 aa18.43■□□□□ 0.54
PHC1-213ENST00000544539 NBPF26B4DH59 902 aa18.43■□□□□ 0.54
PHC1-213ENST00000544539 DDNO94850 711 aaPredicted RBP18.43■□□□□ 0.54
PHC1-213ENST00000544539 NBPF10Q6P3W6 841 aaKnown RBP18.43■□□□□ 0.54
PHC1-213ENST00000544539 NBPF15Q8N660 670 aa18.43■□□□□ 0.54
PHC1-213ENST00000544539 SLX4Q8IY92 1834 aa18.42■□□□□ 0.54
PHC1-213ENST00000544539 POTECB2RU33 542 aa18.42■□□□□ 0.54
PHC1-213ENST00000544539 NFE2L2Q16236 605 aa18.42■□□□□ 0.54
PHC1-213ENST00000544539 C7orf43Q8WVR3 580 aa18.42■□□□□ 0.54
PHC1-213ENST00000544539 CREBZFQ9NS37 354 aa18.42■□□□□ 0.54
PHC1-213ENST00000544539 ERBB4Q15303 1308 aa18.42■□□□□ 0.54
PHC1-213ENST00000544539 LDHDQ86WU2 507 aa18.41■□□□□ 0.54
PHC1-213ENST00000544539 NGEFQ8N5V2 710 aa18.41■□□□□ 0.54
PHC1-213ENST00000544539 JDP2Q8WYK2 163 aa18.41■□□□□ 0.54
PHC1-213ENST00000544539 RPGRQ92834 1020 aaKnown RBP18.41■□□□□ 0.54
PHC1-213ENST00000544539 L3MBTL3Q96JM7 780 aaPredicted RBP18.41■□□□□ 0.54
PHC1-213ENST00000544539 MIS18AQ9NYP9 233 aa18.41■□□□□ 0.54
PHC1-213ENST00000544539 RRP7AQ9Y3A4 280 aaKnown RBP18.41■□□□□ 0.54
PHC1-213ENST00000544539 MAP3K15Q6ZN16 1313 aa18.41■□□□□ 0.54
PHC1-213ENST00000544539 PNMA8AQ86V59 439 aaPredicted RBP18.4■□□□□ 0.54
PHC1-213ENST00000544539 CACNA1SQ13698 1873 aa18.39■□□□□ 0.54
PHC1-213ENST00000544539 EIF4A1P60842 406 aaKnown RBP18.39■□□□□ 0.53
PHC1-213ENST00000544539 LMOD3Q0VAK6 560 aa18.39■□□□□ 0.53
PHC1-213ENST00000544539 HLFQ16534 295 aa18.39■□□□□ 0.53
PHC1-213ENST00000544539 PPP1R42Q7Z4L9 355 aa18.39■□□□□ 0.53
PHC1-213ENST00000544539 HACL1Q9UJ83 578 aa18.39■□□□□ 0.53
PHC1-213ENST00000544539 LAMB4A4D0S4 1761 aa18.39■□□□□ 0.53
PHC1-213ENST00000544539 IARSP41252 1262 aaKnown RBP18.38■□□□□ 0.53
PHC1-213ENST00000544539 RBM17Q96I25 401 aaKnown RBP18.38■□□□□ 0.53
PHC1-213ENST00000544539 PSMD1Q99460 953 aa18.38■□□□□ 0.53
PHC1-213ENST00000544539 ZNF277Q9NRM2 450 aaPredicted RBP18.38■□□□□ 0.53
PHC1-213ENST00000544539 BABAM1Q9NWV8 329 aa18.38■□□□□ 0.53
PHC1-213ENST00000544539 IBTKQ9P2D0 1353 aaPredicted RBP18.38■□□□□ 0.53
PHC1-213ENST00000544539 SCN4AP35499 1836 aa18.37■□□□□ 0.53
PHC1-213ENST00000544539 MYL6BP14649 208 aa18.37■□□□□ 0.53
PHC1-213ENST00000544539 CRY2Q49AN0 593 aa18.37■□□□□ 0.53
PHC1-213ENST00000544539 PARP10Q53GL7 1025 aa18.37■□□□□ 0.53
PHC1-213ENST00000544539 TNS4Q8IZW8 715 aa18.37■□□□□ 0.53
PHC1-213ENST00000544539 SYNE4Q8N205 404 aa18.37■□□□□ 0.53
PHC1-213ENST00000544539 PLEKHF1Q96S99 279 aa18.37■□□□□ 0.53
PHC1-213ENST00000544539 TAF1DQ9H5J8 278 aaPredicted RBP18.37■□□□□ 0.53
PHC1-213ENST00000544539 TSPYL4Q9UJ04 414 aa18.37■□□□□ 0.53
PHC1-213ENST00000544539 CLEC11AQ9Y240 323 aa18.37■□□□□ 0.53
PHC1-213ENST00000544539 HSPA1AP0DMV8 641 aaKnown RBP18.36■□□□□ 0.53
PHC1-213ENST00000544539 HSPA1BP0DMV9 641 aaKnown RBP18.36■□□□□ 0.53
PHC1-213ENST00000544539 EIF6P56537 245 aaKnown RBP18.36■□□□□ 0.53
PHC1-213ENST00000544539 EAPPQ56P03 285 aaPredicted RBP18.36■□□□□ 0.53
PHC1-213ENST00000544539 GPC2Q8N158 579 aa18.36■□□□□ 0.53
PHC1-213ENST00000544539 RIC1Q4ADV7 1423 aa18.35■□□□□ 0.53
PHC1-213ENST00000544539 RALBP1Q15311 655 aa18.35■□□□□ 0.53
PHC1-213ENST00000544539 ZBTB3Q9H5J0 574 aa18.35■□□□□ 0.53
PHC1-213ENST00000544539 LMOD1P29536 600 aaPredicted RBP18.34■□□□□ 0.53
PHC1-213ENST00000544539 HOXA10P31260 410 aaPredicted RBP18.34■□□□□ 0.53
PHC1-213ENST00000544539 EPHX2P34913 555 aa18.34■□□□□ 0.53
PHC1-213ENST00000544539 COL13A1Q5TAT6 717 aaPredicted RBP18.34■□□□□ 0.53
PHC1-213ENST00000544539 GIGYF2Q6Y7W6 1299 aaKnown RBP18.34■□□□□ 0.53
PHC1-213ENST00000544539 NUTM1Q86Y26 1132 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms