RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 DCTN1Q14203 1278 aa18.5■□□□□ 0.55
SEMA4D-224ENST00000544513 STYK1Q6J9G0 422 aa18.5■□□□□ 0.55
SEMA4D-224ENST00000544513 NBPF10Q6P3W6 841 aaKnown RBP18.5■□□□□ 0.55
SEMA4D-224ENST00000544513 NBPF15Q8N660 670 aa18.5■□□□□ 0.55
SEMA4D-224ENST00000544513 FER1L6Q2WGJ9 1857 aa18.5■□□□□ 0.55
SEMA4D-224ENST00000544513 LTBP3Q9NS15 1303 aa18.49■□□□□ 0.55
SEMA4D-224ENST00000544513 SMC1BQ8NDV3 1235 aa18.49■□□□□ 0.55
SEMA4D-224ENST00000544513 TIAM2Q8IVF5 1701 aa18.49■□□□□ 0.55
SEMA4D-224ENST00000544513 POTECB2RU33 542 aa18.48■□□□□ 0.55
SEMA4D-224ENST00000544513 ST5P78524 1137 aa18.48■□□□□ 0.55
SEMA4D-224ENST00000544513 TAF7Q15545 349 aaPredicted RBP18.48■□□□□ 0.55
SEMA4D-224ENST00000544513 CNKSR1Q969H4 720 aa18.48■□□□□ 0.55
SEMA4D-224ENST00000544513 SLX4Q8IY92 1834 aa18.47■□□□□ 0.55
SEMA4D-224ENST00000544513 KLRG2A4D1S0 409 aaPredicted RBP18.47■□□□□ 0.55
SEMA4D-224ENST00000544513 HTRA3P83110 453 aa18.47■□□□□ 0.55
SEMA4D-224ENST00000544513 KLRG1Q96E93 195 aa18.47■□□□□ 0.55
SEMA4D-224ENST00000544513 MASTLQ96GX5 879 aa18.47■□□□□ 0.55
SEMA4D-224ENST00000544513 ZNF652Q9Y2D9 606 aa18.47■□□□□ 0.55
SEMA4D-224ENST00000544513 PRPF40BQ6NWY9 871 aaKnown RBP18.46■□□□□ 0.55
SEMA4D-224ENST00000544513 NBPF5PQ86XG9 351 aaPredicted RBP18.46■□□□□ 0.55
SEMA4D-224ENST00000544513 JMYQ8N9B5 988 aa18.46■□□□□ 0.55
SEMA4D-224ENST00000544513 C7orf43Q8WVR3 580 aa18.46■□□□□ 0.55
SEMA4D-224ENST00000544513 PLEKHF1Q96S99 279 aa18.46■□□□□ 0.55
SEMA4D-224ENST00000544513 ZNF219Q9P2Y4 722 aaPredicted RBP18.46■□□□□ 0.55
SEMA4D-224ENST00000544513 DICER1Q9UPY3 1922 aaKnown RBP18.46■□□□□ 0.55
SEMA4D-224ENST00000544513 MIS18AQ9NYP9 233 aa18.45■□□□□ 0.54
SEMA4D-224ENST00000544513 ARFGEF2Q9Y6D5 1785 aa18.45■□□□□ 0.54
SEMA4D-224ENST00000544513 NPHP1O15259 732 aa18.44■□□□□ 0.54
SEMA4D-224ENST00000544513 ERFEQ4G0M1 354 aa18.44■□□□□ 0.54
SEMA4D-224ENST00000544513 SOGA3Q5TF21 947 aa18.44■□□□□ 0.54
SEMA4D-224ENST00000544513 DPY19L2Q6NUT2 758 aa18.44■□□□□ 0.54
SEMA4D-224ENST00000544513 TAOK3Q9H2K8 898 aa18.44■□□□□ 0.54
SEMA4D-224ENST00000544513 TPTE2Q6XPS3 522 aa18.43■□□□□ 0.54
SEMA4D-224ENST00000544513 NPR1P16066 1061 aa18.42■□□□□ 0.54
SEMA4D-224ENST00000544513 PNISRQ8TF01 805 aaKnown RBP18.42■□□□□ 0.54
SEMA4D-224ENST00000544513 NIP7Q9Y221 180 aaKnown RBP eCLIP18.42■□□□□ 0.54
SEMA4D-224ENST00000544513 DLG5Q8TDM6 1919 aa18.41■□□□□ 0.54
SEMA4D-224ENST00000544513 KDM3BQ7LBC6 1761 aa18.41■□□□□ 0.54
SEMA4D-224ENST00000544513 HLFQ16534 295 aa18.41■□□□□ 0.54
SEMA4D-224ENST00000544513 LAMB4A4D0S4 1761 aa18.4■□□□□ 0.54
SEMA4D-224ENST00000544513 EIF4A1P60842 406 aaKnown RBP18.4■□□□□ 0.54
SEMA4D-224ENST00000544513 NFE2L2Q16236 605 aa18.4■□□□□ 0.54
SEMA4D-224ENST00000544513 ERVV-1B6SEH8 477 aa18.39■□□□□ 0.53
SEMA4D-224ENST00000544513 CACNA1SQ13698 1873 aa18.39■□□□□ 0.53
SEMA4D-224ENST00000544513 NEFMP07197 916 aa18.38■□□□□ 0.53
SEMA4D-224ENST00000544513 CRY2Q49AN0 593 aa18.37■□□□□ 0.53
SEMA4D-224ENST00000544513 CCDC93Q567U6 631 aa18.37■□□□□ 0.53
SEMA4D-224ENST00000544513 THUMPD2Q9BTF0 503 aaKnown RBP18.37■□□□□ 0.53
SEMA4D-224ENST00000544513 DDNO94850 711 aaPredicted RBP18.36■□□□□ 0.53
SEMA4D-224ENST00000544513 MAP3K15Q6ZN16 1313 aa18.36■□□□□ 0.53
SEMA4D-224ENST00000544513 L3MBTL3Q96JM7 780 aaPredicted RBP18.36■□□□□ 0.53
SEMA4D-224ENST00000544513 FKBP4Q02790 459 aaKnown RBP eCLIP18.35■□□□□ 0.53
SEMA4D-224ENST00000544513 OLFM4Q6UX06 510 aa18.35■□□□□ 0.53
SEMA4D-224ENST00000544513 TTLL7Q6ZT98 887 aa18.35■□□□□ 0.53
SEMA4D-224ENST00000544513 RTKN2Q8IZC4 609 aa18.35■□□□□ 0.53
SEMA4D-224ENST00000544513 PNNQ9H307 717 aaKnown RBP18.35■□□□□ 0.53
SEMA4D-224ENST00000544513 SNED1Q8TER0 1413 aa18.34■□□□□ 0.53
SEMA4D-224ENST00000544513 FAM177BA6PVY3 158 aa18.34■□□□□ 0.53
SEMA4D-224ENST00000544513 ALDH1B1P30837 517 aa18.34■□□□□ 0.53
SEMA4D-224ENST00000544513 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
SEMA4D-224ENST00000544513 NUP98P52948 1817 aa18.34■□□□□ 0.53
SEMA4D-224ENST00000544513 RIC1Q4ADV7 1423 aa18.33■□□□□ 0.53
SEMA4D-224ENST00000544513 ABCC12Q96J65 1359 aa18.33■□□□□ 0.53
SEMA4D-224ENST00000544513 IBTKQ9P2D0 1353 aaPredicted RBP18.33■□□□□ 0.53
SEMA4D-224ENST00000544513 ERBB4Q15303 1308 aa18.33■□□□□ 0.53
SEMA4D-224ENST00000544513 CHADLQ6NUI6 762 aa18.33■□□□□ 0.52
SEMA4D-224ENST00000544513 NGEFQ8N5V2 710 aa18.33■□□□□ 0.52
SEMA4D-224ENST00000544513 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.52
SEMA4D-224ENST00000544513 UBN2Q6ZU65 1347 aa18.32■□□□□ 0.52
SEMA4D-224ENST00000544513 MAPK8IP3Q9UPT6 1336 aa18.32■□□□□ 0.52
SEMA4D-224ENST00000544513 POTEIP0CG38 1075 aa18.32■□□□□ 0.52
SEMA4D-224ENST00000544513 POTEJP0CG39 1038 aa18.32■□□□□ 0.52
SEMA4D-224ENST00000544513 GTF2E1P29083 439 aaPredicted RBP18.32■□□□□ 0.52
SEMA4D-224ENST00000544513 HOXA10P31260 410 aaPredicted RBP18.32■□□□□ 0.52
SEMA4D-224ENST00000544513 KIF6Q6ZMV9 814 aa18.32■□□□□ 0.52
SEMA4D-224ENST00000544513 LRP10Q7Z4F1 713 aa18.32■□□□□ 0.52
SEMA4D-224ENST00000544513 ZNF34Q8IZ26 560 aa18.32■□□□□ 0.52
SEMA4D-224ENST00000544513 ZNF277Q9NRM2 450 aaPredicted RBP18.32■□□□□ 0.52
SEMA4D-224ENST00000544513 IQCA1LA6NCM1 817 aa18.31■□□□□ 0.52
SEMA4D-224ENST00000544513 MYL6BP14649 208 aa18.31■□□□□ 0.52
SEMA4D-224ENST00000544513 NUTM1Q86Y26 1132 aa18.31■□□□□ 0.52
SEMA4D-224ENST00000544513 SCN4AP35499 1836 aa18.3■□□□□ 0.52
SEMA4D-224ENST00000544513 ZNF541Q9H0D2 1346 aa18.3■□□□□ 0.52
SEMA4D-224ENST00000544513 FZD9O00144 591 aa18.3■□□□□ 0.52
SEMA4D-224ENST00000544513 PDIA6Q15084 440 aa18.3■□□□□ 0.52
SEMA4D-224ENST00000544513 RALBP1Q15311 655 aa18.3■□□□□ 0.52
SEMA4D-224ENST00000544513 PSMD1Q99460 953 aa18.3■□□□□ 0.52
SEMA4D-224ENST00000544513 TAF1DQ9H5J8 278 aaPredicted RBP18.3■□□□□ 0.52
SEMA4D-224ENST00000544513 BABAM1Q9NWV8 329 aa18.3■□□□□ 0.52
SEMA4D-224ENST00000544513 COL13A1Q5TAT6 717 aaPredicted RBP18.29■□□□□ 0.52
SEMA4D-224ENST00000544513 SUSD4Q5VX71 490 aa18.29■□□□□ 0.52
SEMA4D-224ENST00000544513 GIGYF2Q6Y7W6 1299 aaKnown RBP18.29■□□□□ 0.52
SEMA4D-224ENST00000544513 LDHDQ86WU2 507 aa18.29■□□□□ 0.52
SEMA4D-224ENST00000544513 SYNE4Q8N205 404 aa18.29■□□□□ 0.52
SEMA4D-224ENST00000544513 ZBTB3Q9H5J0 574 aa18.29■□□□□ 0.52
SEMA4D-224ENST00000544513 CREBZFQ9NS37 354 aa18.29■□□□□ 0.52
SEMA4D-224ENST00000544513 TSPYL4Q9UJ04 414 aa18.29■□□□□ 0.52
SEMA4D-224ENST00000544513 PASKQ96RG2 1323 aa18.28■□□□□ 0.52
SEMA4D-224ENST00000544513 NTSR2O95665 410 aa18.28■□□□□ 0.52
SEMA4D-224ENST00000544513 GPTP24298 496 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms