RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ZBTB1Q9Y2K1 713 aa38.17■■■■□ 3.7
CCM2-219ENST00000544363 IBTKQ9P2D0 1353 aaPredicted RBP38.17■■■■□ 3.7
CCM2-219ENST00000544363 RXRBP28702 533 aa38.16■■■■□ 3.7
CCM2-219ENST00000544363 CWF19L2Q2TBE0 894 aaKnown RBP38.16■■■■□ 3.7
CCM2-219ENST00000544363 CEP85Q6P2H3 762 aa38.16■■■■□ 3.7
CCM2-219ENST00000544363 MYD88Q99836 296 aa38.16■■■■□ 3.7
CCM2-219ENST00000544363 IGKV5-2P06315 115 aa38.16■■■■□ 3.7
CCM2-219ENST00000544363 BCL11BQ9C0K0 894 aaPredicted RBP38.15■■■■□ 3.7
CCM2-219ENST00000544363 ZNF330Q9Y3S2 320 aaPredicted RBP38.14■■■■□ 3.7
CCM2-219ENST00000544363 IL6STP40189 918 aaPredicted RBP38.13■■■■□ 3.69
CCM2-219ENST00000544363 CCDC87Q9NVE4 849 aa38.13■■■■□ 3.69
CCM2-219ENST00000544363 RGS17Q9UGC6 210 aaPredicted RBP38.13■■■■□ 3.69
CCM2-219ENST00000544363 NUP188Q5SRE5 1749 aa38.12■■■■□ 3.69
CCM2-219ENST00000544363 NEURL1BA8MQ27 555 aa38.12■■■■□ 3.69
CCM2-219ENST00000544363 INTS5Q6P9B9 1019 aaKnown RBP38.12■■■■□ 3.69
CCM2-219ENST00000544363 SMC5Q8IY18 1101 aa38.12■■■■□ 3.69
CCM2-219ENST00000544363 NBPF7P0C2Y1 421 aaPredicted RBP38.12■■■■□ 3.69
CCM2-219ENST00000544363 CRKLP46109 303 aaKnown RBP38.12■■■■□ 3.69
CCM2-219ENST00000544363 C9orf78Q9NZ63 289 aaPredicted RBP38.12■■■■□ 3.69
CCM2-219ENST00000544363 LRRFIP2Q9Y608 721 aaKnown RBP38.11■■■■□ 3.69
CCM2-219ENST00000544363 KIF6Q6ZMV9 814 aa38.1■■■■□ 3.69
CCM2-219ENST00000544363 ZBTB3Q9H5J0 574 aa38.1■■■■□ 3.69
CCM2-219ENST00000544363 RREB1Q92766 1687 aa38.1■■■■□ 3.69
CCM2-219ENST00000544363 COL5A3P25940 1745 aaPredicted RBP38.08■■■■□ 3.69
CCM2-219ENST00000544363 GRM8O00222 908 aa38.08■■■■□ 3.69
CCM2-219ENST00000544363 UTYO14607 1347 aa38.08■■■■□ 3.69
CCM2-219ENST00000544363 GCKRQ14397 625 aa38.07■■■■□ 3.68
CCM2-219ENST00000544363 GCC1Q96CN9 775 aa38.06■■■■□ 3.68
CCM2-219ENST00000544363 HDAC5Q9UQL6 1122 aa38.06■■■■□ 3.68
CCM2-219ENST00000544363 EIF5P55010 431 aaKnown RBP38.05■■■■□ 3.68
CCM2-219ENST00000544363 NPM2Q86SE8 214 aaKnown RBP38.05■■■■□ 3.68
CCM2-219ENST00000544363 SKAP1Q86WV1 359 aa38.05■■■■□ 3.68
CCM2-219ENST00000544363 MAP3K15Q6ZN16 1313 aa38.05■■■■□ 3.68
CCM2-219ENST00000544363 HMMRO75330 724 aa38.05■■■■□ 3.68
CCM2-219ENST00000544363 LINC00116Q8NCU8 138 aa38.05■■■■□ 3.68
CCM2-219ENST00000544363 PDZRN3Q9UPQ7 1066 aa38.05■■■■□ 3.68
CCM2-219ENST00000544363 ATP5J2-PTCD1G3V325 749 aa38.04■■■■□ 3.68
CCM2-219ENST00000544363 ATP8B2P98198 1209 aa38.04■■■■□ 3.68
CCM2-219ENST00000544363 LY75O60449 1722 aa38.04■■■■□ 3.68
CCM2-219ENST00000544363 MYH14Q7Z406 1995 aaKnown RBP38.03■■■■□ 3.68
CCM2-219ENST00000544363 POTEAQ6S8J7 498 aa38.03■■■■□ 3.68
CCM2-219ENST00000544363 AFDNP55196 1824 aaKnown RBP38.03■■■■□ 3.68
CCM2-219ENST00000544363 ARXQ96QS3 562 aa38.02■■■■□ 3.68
CCM2-219ENST00000544363 DCTPP1Q9H773 170 aa38.01■■■■□ 3.68
CCM2-219ENST00000544363 CCNL1Q9UK58 526 aaPredicted RBP38.01■■■■□ 3.68
CCM2-219ENST00000544363 KCNQ4P56696 695 aa38.01■■■■□ 3.67
CCM2-219ENST00000544363 CNTNAP4Q9C0A0 1308 aa38■■■■□ 3.67
CCM2-219ENST00000544363 TCIRG1Q13488 830 aa38■■■■□ 3.67
CCM2-219ENST00000544363 DZIP3Q86Y13 1208 aaKnown RBP37.99■■■■□ 3.67
CCM2-219ENST00000544363 TRIM37O94972 964 aa37.98■■■■□ 3.67
CCM2-219ENST00000544363 GIGYF2Q6Y7W6 1299 aaKnown RBP37.98■■■■□ 3.67
CCM2-219ENST00000544363 ERVV-1B6SEH8 477 aa37.98■■■■□ 3.67
CCM2-219ENST00000544363 CCDC191Q8NCU4 936 aa37.98■■■■□ 3.67
CCM2-219ENST00000544363 ISCA1Q9BUE6 129 aa37.98■■■■□ 3.67
CCM2-219ENST00000544363 RC3H1Q5TC82 1133 aaKnown RBP37.97■■■■□ 3.67
CCM2-219ENST00000544363 CWC25Q9NXE8 425 aaPredicted RBP37.97■■■■□ 3.67
CCM2-219ENST00000544363 PNMA6EA0A0J9YXQ4 647 aa37.96■■■■□ 3.67
CCM2-219ENST00000544363 TBC1D2BQ9UPU7 963 aa37.96■■■■□ 3.67
CCM2-219ENST00000544363 NUCB1Q02818 461 aa37.95■■■■□ 3.67
CCM2-219ENST00000544363 A0A087WZG4 1122 aa37.94■■■■□ 3.66
CCM2-219ENST00000544363 TRIM28Q13263 835 aaKnown RBP37.94■■■■□ 3.66
CCM2-219ENST00000544363 HLFQ16534 295 aa37.94■■■■□ 3.66
CCM2-219ENST00000544363 HSP90AB3PQ58FF7 597 aa37.94■■■■□ 3.66
CCM2-219ENST00000544363 SUCLG2Q96I99 432 aa37.94■■■■□ 3.66
CCM2-219ENST00000544363 RGS3P49796 1198 aa37.93■■■■□ 3.66
CCM2-219ENST00000544363 PPP1R42Q7Z4L9 355 aa37.93■■■■□ 3.66
CCM2-219ENST00000544363 SSH3Q8TE77 659 aa37.93■■■■□ 3.66
CCM2-219ENST00000544363 MTX1Q13505 466 aa37.92■■■■□ 3.66
CCM2-219ENST00000544363 COL15A1P39059 1388 aa37.91■■■■□ 3.66
CCM2-219ENST00000544363 KAZALD1Q96I82 304 aa37.91■■■■□ 3.66
CCM2-219ENST00000544363 H7C1W4 665 aa37.9■■■■□ 3.66
CCM2-219ENST00000544363 POLA2Q14181 598 aa37.9■■■■□ 3.66
CCM2-219ENST00000544363 ANKRD45Q5TZF3 282 aa37.9■■■■□ 3.66
CCM2-219ENST00000544363 UBE3BQ7Z3V4 1068 aa37.9■■■■□ 3.66
CCM2-219ENST00000544363 TAF1LQ8IZX4 1826 aa37.9■■■■□ 3.66
CCM2-219ENST00000544363 CASP7P55210 303 aa37.9■■■■□ 3.66
CCM2-219ENST00000544363 CHD1LQ86WJ1 897 aa37.9■■■■□ 3.66
CCM2-219ENST00000544363 SRGAP3O43295 1099 aa37.88■■■■□ 3.65
CCM2-219ENST00000544363 BICC1Q9H694 974 aaKnown RBP37.88■■■■□ 3.65
CCM2-219ENST00000544363 NUP98P52948 1817 aa37.88■■■■□ 3.65
CCM2-219ENST00000544363 CAMTA2O94983 1202 aa37.87■■■■□ 3.65
CCM2-219ENST00000544363 JARID2Q92833 1246 aaPredicted RBP37.87■■■■□ 3.65
CCM2-219ENST00000544363 ANKRD36CQ5JPF3 1778 aa37.86■■■■□ 3.65
CCM2-219ENST00000544363 RPS6KA4O75676 772 aa37.86■■■■□ 3.65
CCM2-219ENST00000544363 SLC27A3Q5K4L6 730 aa37.85■■■■□ 3.65
CCM2-219ENST00000544363 LNPKQ9C0E8 428 aa37.85■■■■□ 3.65
CCM2-219ENST00000544363 LRRC4BQ9NT99 713 aa37.85■■■■□ 3.65
CCM2-219ENST00000544363 PDE4AP27815 886 aa37.83■■■■□ 3.65
CCM2-219ENST00000544363 NLRP10Q86W26 655 aa37.83■■■■□ 3.65
CCM2-219ENST00000544363 EP400Q96L91 3159 aa37.83■■■■□ 3.65
CCM2-219ENST00000544363 EPHA10Q5JZY3 1008 aa37.82■■■■□ 3.64
CCM2-219ENST00000544363 C4BP0C0L5 1744 aa37.82■■■■□ 3.64
CCM2-219ENST00000544363 GNPATO15228 680 aa37.81■■■■□ 3.64
CCM2-219ENST00000544363 GPTP24298 496 aa37.81■■■■□ 3.64
CCM2-219ENST00000544363 ZNF34Q8IZ26 560 aa37.81■■■■□ 3.64
CCM2-219ENST00000544363 ILDR1Q86SU0 546 aaPredicted RBP37.8■■■■□ 3.64
CCM2-219ENST00000544363 EXOC6BQ9Y2D4 811 aa37.8■■■■□ 3.64
CCM2-219ENST00000544363 RTCBQ9Y3I0 505 aaKnown RBP37.79■■■■□ 3.64
CCM2-219ENST00000544363 PCCAP05165 728 aaPredicted RBP37.79■■■■□ 3.64
CCM2-219ENST00000544363 RABL6Q3YEC7 729 aaPredicted RBP37.79■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms