RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 RABEP1Q15276 862 aa20.9■□□□□ 0.94
PTPRO-209ENST00000543886 BICC1Q9H694 974 aaKnown RBP20.9■□□□□ 0.94
PTPRO-209ENST00000543886 GCKRQ14397 625 aa20.89■□□□□ 0.93
PTPRO-209ENST00000543886 BTG4Q9NY30 223 aa20.89■□□□□ 0.93
PTPRO-209ENST00000543886 AFDNP55196 1824 aaKnown RBP20.89■□□□□ 0.93
PTPRO-209ENST00000543886 COL14A1Q05707 1796 aaKnown RBP20.89■□□□□ 0.93
PTPRO-209ENST00000543886 KCPQ6ZWJ8 1503 aa20.88■□□□□ 0.93
PTPRO-209ENST00000543886 RBM42Q9BTD8 480 aaKnown RBP20.88■□□□□ 0.93
PTPRO-209ENST00000543886 CHMP5Q9NZZ3 219 aa20.88■□□□□ 0.93
PTPRO-209ENST00000543886 CLASRPQ8N2M8 674 aaKnown RBP20.87■□□□□ 0.93
PTPRO-209ENST00000543886 KAZALD1Q96I82 304 aa20.87■□□□□ 0.93
PTPRO-209ENST00000543886 ESYT1Q9BSJ8 1104 aa20.87■□□□□ 0.93
PTPRO-209ENST00000543886 K7ELQ4 463 aaPredicted RBP20.87■□□□□ 0.93
PTPRO-209ENST00000543886 AHDC1Q5TGY3 1603 aaPredicted RBP20.87■□□□□ 0.93
PTPRO-209ENST00000543886 AK9Q5TCS8 1911 aa20.87■□□□□ 0.93
PTPRO-209ENST00000543886 CHMLP26374 656 aa20.86■□□□□ 0.93
PTPRO-209ENST00000543886 PLBD2Q8NHP8 589 aa20.86■□□□□ 0.93
PTPRO-209ENST00000543886 PA2G4Q9UQ80 394 aaKnown RBP20.86■□□□□ 0.93
PTPRO-209ENST00000543886 TOGARAM1Q9Y4F4 1720 aa20.86■□□□□ 0.93
PTPRO-209ENST00000543886 PI4K2BQ8TCG2 481 aa20.85■□□□□ 0.93
PTPRO-209ENST00000543886 HSP90AA1P07900 732 aaKnown RBP20.85■□□□□ 0.93
PTPRO-209ENST00000543886 TMOD3Q9NYL9 352 aa20.85■□□□□ 0.93
PTPRO-209ENST00000543886 TTC41PQ6P2S7 1318 aa20.85■□□□□ 0.93
PTPRO-209ENST00000543886 TNS2Q63HR2 1409 aa20.85■□□□□ 0.93
PTPRO-209ENST00000543886 COL22A1Q8NFW1 1626 aaPredicted RBP20.85■□□□□ 0.93
PTPRO-209ENST00000543886 PTCD1O75127 700 aaKnown RBP20.84■□□□□ 0.93
PTPRO-209ENST00000543886 CD2BP2O95400 341 aaKnown RBP20.84■□□□□ 0.93
PTPRO-209ENST00000543886 G3BP1Q13283 466 aaKnown RBP eCLIP20.84■□□□□ 0.93
PTPRO-209ENST00000543886 UNC5CLQ8IV45 518 aa20.84■□□□□ 0.93
PTPRO-209ENST00000543886 GPATCH3Q96I76 525 aa20.84■□□□□ 0.93
PTPRO-209ENST00000543886 USP42Q9H9J4 1324 aaKnown RBP20.84■□□□□ 0.93
PTPRO-209ENST00000543886 NBPF26B4DH59 902 aa20.83■□□□□ 0.93
PTPRO-209ENST00000543886 IFIT2P09913 472 aaKnown RBP20.83■□□□□ 0.93
PTPRO-209ENST00000543886 NBPF14Q5TI25 921 aa20.83■□□□□ 0.93
PTPRO-209ENST00000543886 NBPF10Q6P3W6 841 aaKnown RBP20.83■□□□□ 0.93
PTPRO-209ENST00000543886 CNTROBQ8N137 903 aa20.83■□□□□ 0.93
PTPRO-209ENST00000543886 NBPF15Q8N660 670 aa20.83■□□□□ 0.93
PTPRO-209ENST00000543886 GLRX3O76003 335 aaKnown RBP20.82■□□□□ 0.92
PTPRO-209ENST00000543886 MCCP23508 829 aa20.82■□□□□ 0.92
PTPRO-209ENST00000543886 ATP5J2-PTCD1G3V325 749 aa20.81■□□□□ 0.92
PTPRO-209ENST00000543886 MAP4K4O95819 1239 aaPredicted RBP20.81■□□□□ 0.92
PTPRO-209ENST00000543886 COL16A1Q07092 1604 aaPredicted RBP20.81■□□□□ 0.92
PTPRO-209ENST00000543886 UBE3BQ7Z3V4 1068 aa20.81■□□□□ 0.92
PTPRO-209ENST00000543886 AACSQ86V21 672 aa20.81■□□□□ 0.92
PTPRO-209ENST00000543886 ANO2Q9NQ90 1003 aa20.81■□□□□ 0.92
PTPRO-209ENST00000543886 NUP188Q5SRE5 1749 aa20.81■□□□□ 0.92
PTPRO-209ENST00000543886 ST18O60284 1047 aa20.8■□□□□ 0.92
PTPRO-209ENST00000543886 A1BGP04217 495 aa20.8■□□□□ 0.92
PTPRO-209ENST00000543886 ECHDC1Q9NTX5 307 aa20.8■□□□□ 0.92
PTPRO-209ENST00000543886 COL15A1P39059 1388 aa20.8■□□□□ 0.92
PTPRO-209ENST00000543886 PLCH1Q4KWH8 1693 aa20.79■□□□□ 0.92
PTPRO-209ENST00000543886 A0A087WZG4 1122 aa20.79■□□□□ 0.92
PTPRO-209ENST00000543886 EPHA10Q5JZY3 1008 aa20.79■□□□□ 0.92
PTPRO-209ENST00000543886 CIZ1Q9ULV3 898 aaPredicted RBP20.79■□□□□ 0.92
PTPRO-209ENST00000543886 DISP2A7MBM2 1401 aa20.79■□□□□ 0.92
PTPRO-209ENST00000543886 DDIT3P35638 169 aa20.79■□□□□ 0.92
PTPRO-209ENST00000543886 SIL1Q9H173 461 aa20.79■□□□□ 0.92
PTPRO-209ENST00000543886 SASH1O94885 1247 aa20.77■□□□□ 0.92
PTPRO-209ENST00000543886 TTLL7Q6ZT98 887 aa20.77■□□□□ 0.92
PTPRO-209ENST00000543886 JARID2Q92833 1246 aaPredicted RBP20.77■□□□□ 0.92
PTPRO-209ENST00000543886 LTBP4Q8N2S1 1624 aa20.76■□□□□ 0.91
PTPRO-209ENST00000543886 EPB41L2O43491 1005 aaKnown RBP20.76■□□□□ 0.91
PTPRO-209ENST00000543886 RABL6Q3YEC7 729 aaPredicted RBP20.76■□□□□ 0.91
PTPRO-209ENST00000543886 FOXD4L1Q9NU39 408 aa20.76■□□□□ 0.91
PTPRO-209ENST00000543886 CWC25Q9NXE8 425 aaPredicted RBP20.76■□□□□ 0.91
PTPRO-209ENST00000543886 ITGB4P16144 1822 aa20.76■□□□□ 0.91
PTPRO-209ENST00000543886 KLHDC4Q8TBB5 520 aa20.75■□□□□ 0.91
PTPRO-209ENST00000543886 PIGBQ92521 554 aa20.75■□□□□ 0.91
PTPRO-209ENST00000543886 TEX13AQ9BXU3 409 aaPredicted RBP20.75■□□□□ 0.91
PTPRO-209ENST00000543886 COPRSQ9NQ92 184 aa20.75■□□□□ 0.91
PTPRO-209ENST00000543886 WNK3Q9BYP7 1800 aa20.75■□□□□ 0.91
PTPRO-209ENST00000543886 ANAPC15P60006 121 aa20.74■□□□□ 0.91
PTPRO-209ENST00000543886 ZBTB3Q9H5J0 574 aa20.74■□□□□ 0.91
PTPRO-209ENST00000543886 CASP7P55210 303 aa20.74■□□□□ 0.91
PTPRO-209ENST00000543886 GSE1Q14687 1217 aa20.74■□□□□ 0.91
PTPRO-209ENST00000543886 VSIG10Q8N0Z9 540 aa20.74■□□□□ 0.91
PTPRO-209ENST00000543886 EAF2Q96CJ1 260 aaPredicted RBP20.74■□□□□ 0.91
PTPRO-209ENST00000543886 ASAP1Q9ULH1 1129 aa20.74■□□□□ 0.91
PTPRO-209ENST00000543886 PHLPP1O60346 1717 aa20.74■□□□□ 0.91
PTPRO-209ENST00000543886 LRP6O75581 1613 aa20.74■□□□□ 0.91
PTPRO-209ENST00000543886 SGSM2O43147 1006 aa20.73■□□□□ 0.91
PTPRO-209ENST00000543886 DIAPH3Q9NSV4 1193 aa20.73■□□□□ 0.91
PTPRO-209ENST00000543886 TJP1Q07157 1748 aa20.72■□□□□ 0.91
PTPRO-209ENST00000543886 H7C1W4 665 aa20.72■□□□□ 0.91
PTPRO-209ENST00000543886 EXOC5O00471 708 aa20.72■□□□□ 0.91
PTPRO-209ENST00000543886 RFX5P48382 616 aaPredicted RBP20.72■□□□□ 0.91
PTPRO-209ENST00000543886 EVI5LQ96CN4 794 aa20.72■□□□□ 0.91
PTPRO-209ENST00000543886 CCDC8Q9H0W5 538 aaPredicted RBP20.72■□□□□ 0.91
PTPRO-209ENST00000543886 ATG3Q9NT62 314 aa20.72■□□□□ 0.91
PTPRO-209ENST00000543886 MCM4P33991 863 aa20.71■□□□□ 0.91
PTPRO-209ENST00000543886 CCDC191Q8NCU4 936 aa20.71■□□□□ 0.91
PTPRO-209ENST00000543886 RUFY2Q8WXA3 655 aa20.71■□□□□ 0.91
PTPRO-209ENST00000543886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.71■□□□□ 0.91
PTPRO-209ENST00000543886 STARD3NLO95772 234 aa20.71■□□□□ 0.91
PTPRO-209ENST00000543886 PTPN12Q05209 780 aaKnown RBP20.71■□□□□ 0.91
PTPRO-209ENST00000543886 KIAA1211Q6ZU35 1233 aa20.71■□□□□ 0.91
PTPRO-209ENST00000543886 DNAJC10Q8IXB1 793 aa20.71■□□□□ 0.91
PTPRO-209ENST00000543886 IL25Q9H293 177 aa20.71■□□□□ 0.91
PTPRO-209ENST00000543886 ZNF330Q9Y3S2 320 aaPredicted RBP20.71■□□□□ 0.91
PTPRO-209ENST00000543886 NEK4P51957 841 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms