RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 MASTLQ96GX5 879 aa30.2■■■□□ 2.43
CDKN3-207ENST00000543789 TAOK3Q9H2K8 898 aa30.2■■■□□ 2.43
CDKN3-207ENST00000543789 DLEC1Q9Y238 1755 aa30.2■■■□□ 2.42
CDKN3-207ENST00000543789 PPP2R1AP30153 589 aa30.19■■■□□ 2.42
CDKN3-207ENST00000543789 LTBP3Q9NS15 1303 aa30.19■■■□□ 2.42
CDKN3-207ENST00000543789 PRPF40BQ6NWY9 871 aaKnown RBP30.18■■■□□ 2.42
CDKN3-207ENST00000543789 NBPF5PQ86XG9 351 aaPredicted RBP30.18■■■□□ 2.42
CDKN3-207ENST00000543789 ZNF652Q9Y2D9 606 aa30.18■■■□□ 2.42
CDKN3-207ENST00000543789 SOGA3Q5TF21 947 aa30.17■■■□□ 2.42
CDKN3-207ENST00000543789 HTATSF1O43719 755 aaKnown RBP30.16■■■□□ 2.42
CDKN3-207ENST00000543789 SIPA1L3O60292 1781 aaPredicted RBP30.15■■■□□ 2.42
CDKN3-207ENST00000543789 SCN7AQ01118 1682 aa30.15■■■□□ 2.42
CDKN3-207ENST00000543789 DCTN1Q14203 1278 aa30.15■■■□□ 2.42
CDKN3-207ENST00000543789 NBPF26B4DH59 902 aa30.12■■■□□ 2.41
CDKN3-207ENST00000543789 TAF7Q15545 349 aaPredicted RBP30.12■■■□□ 2.41
CDKN3-207ENST00000543789 NBPF10Q6P3W6 841 aaKnown RBP30.12■■■□□ 2.41
CDKN3-207ENST00000543789 TPTE2Q6XPS3 522 aa30.12■■■□□ 2.41
CDKN3-207ENST00000543789 NBPF15Q8N660 670 aa30.12■■■□□ 2.41
CDKN3-207ENST00000543789 ANKRD31Q8N7Z5 1873 aa30.12■■■□□ 2.41
CDKN3-207ENST00000543789 RGL2O15211 777 aa30.11■■■□□ 2.41
CDKN3-207ENST00000543789 COL13A1Q5TAT6 717 aaPredicted RBP30.11■■■□□ 2.41
CDKN3-207ENST00000543789 NIP7Q9Y221 180 aaKnown RBP eCLIP30.11■■■□□ 2.41
CDKN3-207ENST00000543789 DDNO94850 711 aaPredicted RBP30.1■■■□□ 2.41
CDKN3-207ENST00000543789 NPR1P16066 1061 aa30.1■■■□□ 2.41
CDKN3-207ENST00000543789 C7orf43Q8WVR3 580 aa30.1■■■□□ 2.41
CDKN3-207ENST00000543789 KLRG2A4D1S0 409 aaPredicted RBP30.09■■■□□ 2.41
CDKN3-207ENST00000543789 CCDC93Q567U6 631 aa30.07■■■□□ 2.4
CDKN3-207ENST00000543789 MIS18AQ9NYP9 233 aa30.07■■■□□ 2.4
CDKN3-207ENST00000543789 CHADLQ6NUI6 762 aa30.06■■■□□ 2.4
CDKN3-207ENST00000543789 COL11A2P13942 1736 aaPredicted RBP30.05■■■□□ 2.4
CDKN3-207ENST00000543789 TIAM2Q8IVF5 1701 aa30.05■■■□□ 2.4
CDKN3-207ENST00000543789 FAM177BA6PVY3 158 aa30.05■■■□□ 2.4
CDKN3-207ENST00000543789 NEFMP07197 916 aa30.03■■■□□ 2.4
CDKN3-207ENST00000543789 HLFQ16534 295 aa30.03■■■□□ 2.4
CDKN3-207ENST00000543789 FER1L6Q2WGJ9 1857 aa30.02■■■□□ 2.4
CDKN3-207ENST00000543789 CCDC88AQ3V6T2 1871 aa30.02■■■□□ 2.4
CDKN3-207ENST00000543789 SLX4Q8IY92 1834 aa30.02■■■□□ 2.4
CDKN3-207ENST00000543789 IQCA1LA6NCM1 817 aa30.02■■■□□ 2.4
CDKN3-207ENST00000543789 GTF2E1P29083 439 aaPredicted RBP30.02■■■□□ 2.4
CDKN3-207ENST00000543789 FKBP4Q02790 459 aaKnown RBP eCLIP30.02■■■□□ 2.4
CDKN3-207ENST00000543789 POTEIP0CG38 1075 aa30.01■■■□□ 2.39
CDKN3-207ENST00000543789 POTEJP0CG39 1038 aa30.01■■■□□ 2.39
CDKN3-207ENST00000543789 ALDH1B1P30837 517 aa30.01■■■□□ 2.39
CDKN3-207ENST00000543789 RTKN2Q8IZC4 609 aa30.01■■■□□ 2.39
CDKN3-207ENST00000543789 PNISRQ8TF01 805 aaKnown RBP30.01■■■□□ 2.39
CDKN3-207ENST00000543789 HSPA1AP0DMV8 641 aaKnown RBP30■■■□□ 2.39
CDKN3-207ENST00000543789 HSPA1BP0DMV9 641 aaKnown RBP30■■■□□ 2.39
CDKN3-207ENST00000543789 L3MBTL3Q96JM7 780 aaPredicted RBP30■■■□□ 2.39
CDKN3-207ENST00000543789 ZNF277Q9NRM2 450 aaPredicted RBP30■■■□□ 2.39
CDKN3-207ENST00000543789 CREBZFQ9NS37 354 aa30■■■□□ 2.39
CDKN3-207ENST00000543789 PCNTO95613 3336 aa30■■■□□ 2.39
CDKN3-207ENST00000543789 NGEFQ8N5V2 710 aa29.99■■■□□ 2.39
CDKN3-207ENST00000543789 BCORQ6W2J9 1755 aa29.99■■■□□ 2.39
CDKN3-207ENST00000543789 OLFM4Q6UX06 510 aa29.98■■■□□ 2.39
CDKN3-207ENST00000543789 TNS4Q8IZW8 715 aa29.98■■■□□ 2.39
CDKN3-207ENST00000543789 ERVV-1B6SEH8 477 aa29.97■■■□□ 2.39
CDKN3-207ENST00000543789 LDHDQ86WU2 507 aa29.97■■■□□ 2.39
CDKN3-207ENST00000543789 TAF1DQ9H5J8 278 aaPredicted RBP29.97■■■□□ 2.39
CDKN3-207ENST00000543789 NYXQ9GZU5 481 aa29.96■■■□□ 2.39
CDKN3-207ENST00000543789 RRP7AQ9Y3A4 280 aaKnown RBP29.95■■■□□ 2.39
CDKN3-207ENST00000543789 EIF4A1P60842 406 aaKnown RBP29.94■■■□□ 2.38
CDKN3-207ENST00000543789 SYNE4Q8N205 404 aa29.94■■■□□ 2.38
CDKN3-207ENST00000543789 PLEKHF1Q96S99 279 aa29.94■■■□□ 2.38
CDKN3-207ENST00000543789 DICER1Q9UPY3 1922 aaKnown RBP29.94■■■□□ 2.38
CDKN3-207ENST00000543789 MKRN1Q9UHC7 482 aaKnown RBP29.93■■■□□ 2.38
CDKN3-207ENST00000543789 MAP3K15Q6ZN16 1313 aa29.93■■■□□ 2.38
CDKN3-207ENST00000543789 IARSP41252 1262 aaKnown RBP29.92■■■□□ 2.38
CDKN3-207ENST00000543789 NFE2L2Q16236 605 aa29.92■■■□□ 2.38
CDKN3-207ENST00000543789 KIF6Q6ZMV9 814 aa29.92■■■□□ 2.38
CDKN3-207ENST00000543789 NUTM1Q86Y26 1132 aa29.92■■■□□ 2.38
CDKN3-207ENST00000543789 ZNF541Q9H0D2 1346 aa29.92■■■□□ 2.38
CDKN3-207ENST00000543789 CRY2Q49AN0 593 aa29.91■■■□□ 2.38
CDKN3-207ENST00000543789 TTLL7Q6ZT98 887 aa29.91■■■□□ 2.38
CDKN3-207ENST00000543789 HACL1Q9UJ83 578 aa29.91■■■□□ 2.38
CDKN3-207ENST00000543789 EAPPQ56P03 285 aaPredicted RBP29.9■■■□□ 2.38
CDKN3-207ENST00000543789 THUMPD2Q9BTF0 503 aaKnown RBP29.9■■■□□ 2.38
CDKN3-207ENST00000543789 PNNQ9H307 717 aaKnown RBP29.9■■■□□ 2.38
CDKN3-207ENST00000543789 PASKQ96RG2 1323 aa29.9■■■□□ 2.38
CDKN3-207ENST00000543789 FZD9O00144 591 aa29.89■■■□□ 2.38
CDKN3-207ENST00000543789 CAPN15O75808 1086 aa29.89■■■□□ 2.38
CDKN3-207ENST00000543789 MYL6BP14649 208 aa29.89■■■□□ 2.38
CDKN3-207ENST00000543789 CC2D2BQ6DHV5 1058 aa29.88■■■□□ 2.37
CDKN3-207ENST00000543789 PSMD1Q99460 953 aa29.88■■■□□ 2.37
CDKN3-207ENST00000543789 CLEC11AQ9Y240 323 aa29.88■■■□□ 2.37
CDKN3-207ENST00000543789 ARFGEF2Q9Y6D5 1785 aa29.87■■■□□ 2.37
CDKN3-207ENST00000543789 GPTP24298 496 aa29.87■■■□□ 2.37
CDKN3-207ENST00000543789 EPHX2P34913 555 aa29.87■■■□□ 2.37
CDKN3-207ENST00000543789 JDP2Q8WYK2 163 aa29.87■■■□□ 2.37
CDKN3-207ENST00000543789 RPGRQ92834 1020 aaKnown RBP29.87■■■□□ 2.37
CDKN3-207ENST00000543789 ABCC12Q96J65 1359 aa29.87■■■□□ 2.37
CDKN3-207ENST00000543789 ITGBL1O95965 494 aaPredicted RBP29.86■■■□□ 2.37
CDKN3-207ENST00000543789 ZBTB3Q9H5J0 574 aa29.86■■■□□ 2.37
CDKN3-207ENST00000543789 HOXA10P31260 410 aaPredicted RBP29.85■■■□□ 2.37
CDKN3-207ENST00000543789 SUSD4Q5VX71 490 aa29.85■■■□□ 2.37
CDKN3-207ENST00000543789 PNMA8AQ86V59 439 aaPredicted RBP29.85■■■□□ 2.37
CDKN3-207ENST00000543789 GPC2Q8N158 579 aa29.85■■■□□ 2.37
CDKN3-207ENST00000543789 MAPK8IP3Q9UPT6 1336 aa29.85■■■□□ 2.37
CDKN3-207ENST00000543789 TMEM88BA6NKF7 163 aa29.84■■■□□ 2.37
CDKN3-207ENST00000543789 CNTNAP1P78357 1384 aa29.84■■■□□ 2.37
CDKN3-207ENST00000543789 RNF123Q5XPI4 1314 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms