RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 MYL6BP14649 208 aa21.6■■□□□ 1.05
PTPN6-222ENST00000543744 HSPA4P34932 840 aa21.6■■□□□ 1.05
PTPN6-222ENST00000543744 SUCLG2Q96I99 432 aa21.6■■□□□ 1.05
PTPN6-222ENST00000543744 PA2G4Q9UQ80 394 aaKnown RBP21.6■■□□□ 1.05
PTPN6-222ENST00000543744 PLEKHG2Q9H7P9 1386 aa21.6■■□□□ 1.05
PTPN6-222ENST00000543744 NEXNQ0ZGT2 675 aa21.6■■□□□ 1.05
PTPN6-222ENST00000543744 TTC5Q8N0Z6 440 aa21.6■■□□□ 1.05
PTPN6-222ENST00000543744 GPATCH3Q96I76 525 aa21.6■■□□□ 1.05
PTPN6-222ENST00000543744 ZNF496Q96IT1 587 aaPredicted RBP21.6■■□□□ 1.05
PTPN6-222ENST00000543744 ECHDC1Q9NTX5 307 aa21.6■■□□□ 1.05
PTPN6-222ENST00000543744 SPATA31A3Q5VYP0 1347 aa21.59■■□□□ 1.05
PTPN6-222ENST00000543744 IFIT2P09913 472 aaKnown RBP21.59■■□□□ 1.05
PTPN6-222ENST00000543744 KAZALD1Q96I82 304 aa21.59■■□□□ 1.05
PTPN6-222ENST00000543744 BICC1Q9H694 974 aaKnown RBP21.59■■□□□ 1.05
PTPN6-222ENST00000543744 IGKV5-2P06315 115 aa21.58■■□□□ 1.05
PTPN6-222ENST00000543744 MCTP1Q6DN14 999 aa21.58■■□□□ 1.05
PTPN6-222ENST00000543744 XAGE3Q8WTP9 111 aa21.58■■□□□ 1.05
PTPN6-222ENST00000543744 RAD50Q92878 1312 aa21.58■■□□□ 1.05
PTPN6-222ENST00000543744 CYP27B1O15528 508 aa21.58■■□□□ 1.04
PTPN6-222ENST00000543744 AK9Q5TCS8 1911 aa21.58■■□□□ 1.04
PTPN6-222ENST00000543744 SNRPA1P09661 255 aaKnown RBP21.57■■□□□ 1.04
PTPN6-222ENST00000543744 CUL4AQ13619 759 aa21.57■■□□□ 1.04
PTPN6-222ENST00000543744 KLHL40Q2TBA0 621 aa21.57■■□□□ 1.04
PTPN6-222ENST00000543744 KIAA1211Q6ZU35 1233 aa21.57■■□□□ 1.04
PTPN6-222ENST00000543744 COPS6Q7L5N1 327 aa21.57■■□□□ 1.04
PTPN6-222ENST00000543744 DDX49Q9Y6V7 483 aaKnown RBP21.57■■□□□ 1.04
PTPN6-222ENST00000543744 CRYBG1Q9Y4K1 1723 aa21.57■■□□□ 1.04
PTPN6-222ENST00000543744 C5P01031 1676 aa21.57■■□□□ 1.04
PTPN6-222ENST00000543744 G3BP1Q13283 466 aaKnown RBP eCLIP21.56■■□□□ 1.04
PTPN6-222ENST00000543744 UPF3BQ9BZI7 483 aaKnown RBP21.56■■□□□ 1.04
PTPN6-222ENST00000543744 GRPEL1Q9HAV7 217 aa21.56■■□□□ 1.04
PTPN6-222ENST00000543744 CWC27Q6UX04 472 aaKnown RBP21.56■■□□□ 1.04
PTPN6-222ENST00000543744 AACSQ86V21 672 aa21.56■■□□□ 1.04
PTPN6-222ENST00000543744 FMNL2Q96PY5 1086 aa21.56■■□□□ 1.04
PTPN6-222ENST00000543744 ZDHHC9Q9Y397 364 aa21.56■■□□□ 1.04
PTPN6-222ENST00000543744 CPDO75976 1380 aa21.56■■□□□ 1.04
PTPN6-222ENST00000543744 NEURL1BA8MQ27 555 aa21.55■■□□□ 1.04
PTPN6-222ENST00000543744 INTS4Q96HW7 963 aaKnown RBP21.55■■□□□ 1.04
PTPN6-222ENST00000543744 METTL22Q9BUU2 404 aaPredicted RBP21.55■■□□□ 1.04
PTPN6-222ENST00000543744 LSG1Q9H089 658 aaKnown RBP21.55■■□□□ 1.04
PTPN6-222ENST00000543744 DIAPH3Q9NSV4 1193 aa21.55■■□□□ 1.04
PTPN6-222ENST00000543744 MRC1P22897 1456 aa21.55■■□□□ 1.04
PTPN6-222ENST00000543744 GCKRQ14397 625 aa21.55■■□□□ 1.04
PTPN6-222ENST00000543744 NOL8Q76FK4 1167 aaKnown RBP21.55■■□□□ 1.04
PTPN6-222ENST00000543744 RUFY2Q8WXA3 655 aa21.55■■□□□ 1.04
PTPN6-222ENST00000543744 USP16Q9Y5T5 823 aa21.55■■□□□ 1.04
PTPN6-222ENST00000543744 ANKRD13DQ6ZTN6 518 aa21.54■■□□□ 1.04
PTPN6-222ENST00000543744 MYD88Q99836 296 aa21.54■■□□□ 1.04
PTPN6-222ENST00000543744 PANK2Q9BZ23 570 aa21.54■■□□□ 1.04
PTPN6-222ENST00000543744 SASH1O94885 1247 aa21.53■■□□□ 1.04
PTPN6-222ENST00000543744 CABP4P57796 275 aa21.53■■□□□ 1.04
PTPN6-222ENST00000543744 EVI5LQ96CN4 794 aa21.52■■□□□ 1.04
PTPN6-222ENST00000543744 LMBRD1Q9NUN5 540 aa21.52■■□□□ 1.04
PTPN6-222ENST00000543744 SNX14Q9Y5W7 946 aa21.52■■□□□ 1.04
PTPN6-222ENST00000543744 HSPA2P54652 639 aa21.51■■□□□ 1.03
PTPN6-222ENST00000543744 LRP10Q7Z4F1 713 aa21.51■■□□□ 1.03
PTPN6-222ENST00000543744 FAM43AQ8N2R8 423 aa21.51■■□□□ 1.03
PTPN6-222ENST00000543744 PKD1L3Q7Z443 1732 aa21.51■■□□□ 1.03
PTPN6-222ENST00000543744 GAS2L3Q86XJ1 694 aa21.51■■□□□ 1.03
PTPN6-222ENST00000543744 EAF2Q96CJ1 260 aaPredicted RBP21.51■■□□□ 1.03
PTPN6-222ENST00000543744 SIL1Q9H173 461 aa21.5■■□□□ 1.03
PTPN6-222ENST00000543744 BRINP3Q76B58 766 aa21.5■■□□□ 1.03
PTPN6-222ENST00000543744 PIP4K2AP48426 406 aaPredicted RBP21.49■■□□□ 1.03
PTPN6-222ENST00000543744 PRPF40AO75400 957 aaKnown RBP21.48■■□□□ 1.03
PTPN6-222ENST00000543744 BRD1O95696 1058 aa21.48■■□□□ 1.03
PTPN6-222ENST00000543744 RASEFQ8IZ41 740 aa21.48■■□□□ 1.03
PTPN6-222ENST00000543744 CCDC8Q9H0W5 538 aaPredicted RBP21.48■■□□□ 1.03
PTPN6-222ENST00000543744 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.48■■□□□ 1.03
PTPN6-222ENST00000543744 NCLP19338 710 aaKnown RBP21.48■■□□□ 1.03
PTPN6-222ENST00000543744 EPHA10Q5JZY3 1008 aa21.48■■□□□ 1.03
PTPN6-222ENST00000543744 FOXD4L5Q5VV16 416 aaPredicted RBP21.47■■□□□ 1.03
PTPN6-222ENST00000543744 KLHDC4Q8TBB5 520 aa21.47■■□□□ 1.03
PTPN6-222ENST00000543744 FOXD4L4Q8WXT5 416 aaPredicted RBP21.47■■□□□ 1.03
PTPN6-222ENST00000543744 PRDM11Q9NQV5 511 aa21.47■■□□□ 1.03
PTPN6-222ENST00000543744 HIP1O00291 1037 aa21.46■■□□□ 1.03
PTPN6-222ENST00000543744 WDR17Q8IZU2 1322 aa21.46■■□□□ 1.03
PTPN6-222ENST00000543744 TTC14Q96N46 770 aa21.46■■□□□ 1.03
PTPN6-222ENST00000543744 TOM1L2Q6ZVM7 507 aa21.45■■□□□ 1.02
PTPN6-222ENST00000543744 TLR7Q9NYK1 1049 aaKnown RBP21.45■■□□□ 1.02
PTPN6-222ENST00000543744 PCDH11XQ9BZA7 1347 aa21.45■■□□□ 1.02
PTPN6-222ENST00000543744 PCDH11YQ9BZA8 1340 aa21.45■■□□□ 1.02
PTPN6-222ENST00000543744 PTH1RQ03431 593 aa21.45■■□□□ 1.02
PTPN6-222ENST00000543744 CAVIN1Q6NZI2 390 aaKnown RBP21.45■■□□□ 1.02
PTPN6-222ENST00000543744 ZCRB1Q8TBF4 217 aaKnown RBP21.45■■□□□ 1.02
PTPN6-222ENST00000543744 COPRSQ9NQ92 184 aa21.45■■□□□ 1.02
PTPN6-222ENST00000543744 UBE3BQ7Z3V4 1068 aa21.44■■□□□ 1.02
PTPN6-222ENST00000543744 PLBD2Q8NHP8 589 aa21.44■■□□□ 1.02
PTPN6-222ENST00000543744 JARID2Q92833 1246 aaPredicted RBP21.44■■□□□ 1.02
PTPN6-222ENST00000543744 AK2P54819 239 aa21.43■■□□□ 1.02
PTPN6-222ENST00000543744 LIMCH1Q9UPQ0 1083 aa21.43■■□□□ 1.02
PTPN6-222ENST00000543744 ATP5J2-PTCD1G3V325 749 aa21.43■■□□□ 1.02
PTPN6-222ENST00000543744 PTCD1O75127 700 aaKnown RBP21.43■■□□□ 1.02
PTPN6-222ENST00000543744 CASTP20810 708 aaKnown RBP21.43■■□□□ 1.02
PTPN6-222ENST00000543744 PRPF40BQ6NWY9 871 aaKnown RBP21.43■■□□□ 1.02
PTPN6-222ENST00000543744 BOLA2Q9H3K6 86 aa21.43■■□□□ 1.02
PTPN6-222ENST00000543744 ERBB4Q15303 1308 aa21.42■■□□□ 1.02
PTPN6-222ENST00000543744 PARP4Q9UKK3 1724 aaKnown RBP21.42■■□□□ 1.02
PTPN6-222ENST00000543744 COL15A1P39059 1388 aa21.42■■□□□ 1.02
PTPN6-222ENST00000543744 A0A087WZG4 1122 aa21.42■■□□□ 1.02
PTPN6-222ENST00000543744 ZNF445P59923 1031 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms