RNA–Protein interactions for RNA: ENST00000543405.1

CACNA2D4-216, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-216ENST00000543405 COL3A1P02461 1466 aaPredicted RBP16.82■□□□□ 0.28
CACNA2D4-216ENST00000543405 IQCA1LA6NCM1 817 aa16.82■□□□□ 0.28
CACNA2D4-216ENST00000543405 TMEM88BA6NKF7 163 aa16.82■□□□□ 0.28
CACNA2D4-216ENST00000543405 STYK1Q6J9G0 422 aa16.82■□□□□ 0.28
CACNA2D4-216ENST00000543405 TTC5Q8N0Z6 440 aa16.82■□□□□ 0.28
CACNA2D4-216ENST00000543405 RNF216Q9NWF9 866 aaPredicted RBP16.82■□□□□ 0.28
CACNA2D4-216ENST00000543405 CAMTA2O94983 1202 aa16.81■□□□□ 0.28
CACNA2D4-216ENST00000543405 ITGBL1O95965 494 aaPredicted RBP16.81■□□□□ 0.28
CACNA2D4-216ENST00000543405 SRGNP10124 158 aa16.81■□□□□ 0.28
CACNA2D4-216ENST00000543405 HSPA8P11142 646 aaKnown RBP16.81■□□□□ 0.28
CACNA2D4-216ENST00000543405 IL6STP40189 918 aaPredicted RBP16.81■□□□□ 0.28
CACNA2D4-216ENST00000543405 PRPF40BQ6NWY9 871 aaKnown RBP16.81■□□□□ 0.28
CACNA2D4-216ENST00000543405 ABHD8Q96I13 439 aa16.81■□□□□ 0.28
CACNA2D4-216ENST00000543405 TBC1D2BQ9UPU7 963 aa16.81■□□□□ 0.28
CACNA2D4-216ENST00000543405 ZNF541Q9H0D2 1346 aa16.8■□□□□ 0.28
CACNA2D4-216ENST00000543405 ZNF790Q6PG37 636 aa16.8■□□□□ 0.28
CACNA2D4-216ENST00000543405 CNBD1Q8NA66 436 aa16.8■□□□□ 0.28
CACNA2D4-216ENST00000543405 CNKSR1Q969H4 720 aa16.8■□□□□ 0.28
CACNA2D4-216ENST00000543405 THSD7BQ9C0I4 1608 aa16.8■□□□□ 0.28
CACNA2D4-216ENST00000543405 SOGA3Q5TF21 947 aa16.79■□□□□ 0.28
CACNA2D4-216ENST00000543405 C7orf43Q8WVR3 580 aa16.79■□□□□ 0.28
CACNA2D4-216ENST00000543405 TEX13AQ9BXU3 409 aaPredicted RBP16.79■□□□□ 0.28
CACNA2D4-216ENST00000543405 RASSF10A6NK89 507 aa16.78■□□□□ 0.28
CACNA2D4-216ENST00000543405 TRIM26Q12899 539 aaPredicted RBP16.78■□□□□ 0.28
CACNA2D4-216ENST00000543405 EAPPQ56P03 285 aaPredicted RBP16.78■□□□□ 0.28
CACNA2D4-216ENST00000543405 IL17REQ8NFR9 667 aa16.78■□□□□ 0.28
CACNA2D4-216ENST00000543405 MASTLQ96GX5 879 aa16.78■□□□□ 0.28
CACNA2D4-216ENST00000543405 CEMIPQ8WUJ3 1361 aa16.77■□□□□ 0.28
CACNA2D4-216ENST00000543405 DIAPH1O60610 1272 aaKnown RBP16.77■□□□□ 0.28
CACNA2D4-216ENST00000543405 SETDB2Q96T68 719 aa16.77■□□□□ 0.28
CACNA2D4-216ENST00000543405 ZNF330Q9Y3S2 320 aaPredicted RBP16.77■□□□□ 0.28
CACNA2D4-216ENST00000543405 A1BGP04217 495 aa16.76■□□□□ 0.27
CACNA2D4-216ENST00000543405 ST5P78524 1137 aa16.76■□□□□ 0.27
CACNA2D4-216ENST00000543405 TEFQ10587 303 aa16.75■□□□□ 0.27
CACNA2D4-216ENST00000543405 FMNL2Q96PY5 1086 aa16.75■□□□□ 0.27
CACNA2D4-216ENST00000543405 HACL1Q9UJ83 578 aa16.75■□□□□ 0.27
CACNA2D4-216ENST00000543405 RNF123Q5XPI4 1314 aa16.74■□□□□ 0.27
CACNA2D4-216ENST00000543405 SNED1Q8TER0 1413 aa16.74■□□□□ 0.27
CACNA2D4-216ENST00000543405 KLRG2A4D1S0 409 aaPredicted RBP16.74■□□□□ 0.27
CACNA2D4-216ENST00000543405 GNAT3A8MTJ3 354 aa16.74■□□□□ 0.27
CACNA2D4-216ENST00000543405 EPHX2P34913 555 aa16.74■□□□□ 0.27
CACNA2D4-216ENST00000543405 CCDC93Q567U6 631 aa16.74■□□□□ 0.27
CACNA2D4-216ENST00000543405 NPHP1O15259 732 aa16.73■□□□□ 0.27
CACNA2D4-216ENST00000543405 PER1O15534 1290 aaPredicted RBP16.73■□□□□ 0.27
CACNA2D4-216ENST00000543405 FKBP4Q02790 459 aaKnown RBP eCLIP16.73■□□□□ 0.27
CACNA2D4-216ENST00000543405 DEFB115Q30KQ5 88 aa16.73■□□□□ 0.27
CACNA2D4-216ENST00000543405 MAP1SQ66K74 1059 aaPredicted RBP16.73■□□□□ 0.27
CACNA2D4-216ENST00000543405 DZIP3Q86Y13 1208 aaKnown RBP16.73■□□□□ 0.27
CACNA2D4-216ENST00000543405 GAS2L2Q8NHY3 880 aa16.73■□□□□ 0.27
CACNA2D4-216ENST00000543405 ZNF277Q9NRM2 450 aaPredicted RBP16.73■□□□□ 0.27
CACNA2D4-216ENST00000543405 WDR33Q9C0J8 1336 aaKnown RBP16.72■□□□□ 0.27
CACNA2D4-216ENST00000543405 KCNQ3O43525 872 aa16.72■□□□□ 0.27
CACNA2D4-216ENST00000543405 OLFM4Q6UX06 510 aa16.72■□□□□ 0.27
CACNA2D4-216ENST00000543405 CLEC4GQ6UXB4 293 aa16.72■□□□□ 0.27
CACNA2D4-216ENST00000543405 CLEC11AQ9Y240 323 aa16.72■□□□□ 0.27
CACNA2D4-216ENST00000543405 KIF7Q2M1P5 1343 aa16.71■□□□□ 0.27
CACNA2D4-216ENST00000543405 LTBP1Q14766 1721 aa16.71■□□□□ 0.27
CACNA2D4-216ENST00000543405 NPR1P16066 1061 aa16.71■□□□□ 0.27
CACNA2D4-216ENST00000543405 MAP2K1Q02750 393 aaPredicted RBP16.71■□□□□ 0.27
CACNA2D4-216ENST00000543405 CNTROBQ8N137 903 aa16.71■□□□□ 0.27
CACNA2D4-216ENST00000543405 COL4A5P29400 1685 aa16.7■□□□□ 0.26
CACNA2D4-216ENST00000543405 NBPF5PQ86XG9 351 aaPredicted RBP16.7■□□□□ 0.26
CACNA2D4-216ENST00000543405 ABT1Q9ULW3 272 aaKnown RBP16.7■□□□□ 0.26
CACNA2D4-216ENST00000543405 USP16Q9Y5T5 823 aa16.7■□□□□ 0.26
CACNA2D4-216ENST00000543405 NPC1L1Q9UHC9 1359 aa16.69■□□□□ 0.26
CACNA2D4-216ENST00000543405 FZD9O00144 591 aa16.69■□□□□ 0.26
CACNA2D4-216ENST00000543405 RGL2O15211 777 aa16.69■□□□□ 0.26
CACNA2D4-216ENST00000543405 PIP4K2AP48426 406 aaPredicted RBP16.69■□□□□ 0.26
CACNA2D4-216ENST00000543405 MLLT1Q03111 559 aaPredicted RBP16.69■□□□□ 0.26
CACNA2D4-216ENST00000543405 NPM2Q86SE8 214 aaKnown RBP16.69■□□□□ 0.26
CACNA2D4-216ENST00000543405 PNMA8AQ86V59 439 aaPredicted RBP16.69■□□□□ 0.26
CACNA2D4-216ENST00000543405 PRAMEF22A3QJZ6 481 aa16.68■□□□□ 0.26
CACNA2D4-216ENST00000543405 CCDC85CA6NKD9 419 aa16.68■□□□□ 0.26
CACNA2D4-216ENST00000543405 RGS19P49795 217 aa16.68■□□□□ 0.26
CACNA2D4-216ENST00000543405 DDX21Q9NR30 783 aaKnown RBP eCLIP16.68■□□□□ 0.26
CACNA2D4-216ENST00000543405 BTBD11A6QL63 1104 aa16.67■□□□□ 0.26
CACNA2D4-216ENST00000543405 IARSP41252 1262 aaKnown RBP16.67■□□□□ 0.26
CACNA2D4-216ENST00000543405 FMR1Q06787 632 aaKnown RBP eCLIP16.67■□□□□ 0.26
CACNA2D4-216ENST00000543405 CC2D1BQ5T0F9 858 aaKnown RBP16.67■□□□□ 0.26
CACNA2D4-216ENST00000543405 RTKN2Q8IZC4 609 aa16.67■□□□□ 0.26
CACNA2D4-216ENST00000543405 ZNF652Q9Y2D9 606 aa16.67■□□□□ 0.26
CACNA2D4-216ENST00000543405 LAMB4A4D0S4 1761 aa16.66■□□□□ 0.26
CACNA2D4-216ENST00000543405 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
CACNA2D4-216ENST00000543405 GPC2Q8N158 579 aa16.66■□□□□ 0.26
CACNA2D4-216ENST00000543405 PHACTR3Q96KR7 559 aa16.66■□□□□ 0.26
CACNA2D4-216ENST00000543405 CAPNS2Q96L46 248 aa16.66■□□□□ 0.26
CACNA2D4-216ENST00000543405 NBPF26B4DH59 902 aa16.65■□□□□ 0.26
CACNA2D4-216ENST00000543405 NBPF10Q6P3W6 841 aaKnown RBP16.65■□□□□ 0.26
CACNA2D4-216ENST00000543405 NBPF15Q8N660 670 aa16.65■□□□□ 0.26
CACNA2D4-216ENST00000543405 PCDH10Q9P2E7 1040 aa16.65■□□□□ 0.26
CACNA2D4-216ENST00000543405 CYP4F22Q6NT55 531 aa16.64■□□□□ 0.25
CACNA2D4-216ENST00000543405 TPTE2Q6XPS3 522 aa16.64■□□□□ 0.25
CACNA2D4-216ENST00000543405 PAXIP1Q6ZW49 1069 aaPredicted RBP16.64■□□□□ 0.25
CACNA2D4-216ENST00000543405 SYNE4Q8N205 404 aa16.64■□□□□ 0.25
CACNA2D4-216ENST00000543405 PSMD1Q99460 953 aa16.64■□□□□ 0.25
CACNA2D4-216ENST00000543405 RSPH6AQ9H0K4 717 aa16.64■□□□□ 0.25
CACNA2D4-216ENST00000543405 TSKSQ9UJT2 592 aa16.64■□□□□ 0.25
CACNA2D4-216ENST00000543405 NIP7Q9Y221 180 aaKnown RBP eCLIP16.64■□□□□ 0.25
CACNA2D4-216ENST00000543405 ABCC12Q96J65 1359 aa16.64■□□□□ 0.25
CACNA2D4-216ENST00000543405 TRPM7Q96QT4 1865 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms