RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 FAM173BQ6P4H8 233 aa28.25■■■□□ 2.11
SHD-201ENST00000543264 ZSCAN31Q96LW9 406 aaPredicted RBP28.25■■■□□ 2.11
SHD-201ENST00000543264 NUP62CLQ9H1M0 184 aa28.25■■■□□ 2.11
SHD-201ENST00000543264 CYP46A1Q9Y6A2 500 aa28.25■■■□□ 2.11
SHD-201ENST00000543264 MRVI1Q9Y6F6 885 aa28.25■■■□□ 2.11
SHD-201ENST00000543264 OVOS2A0A0J9YW53 1432 aa28.25■■■□□ 2.11
SHD-201ENST00000543264 OVOS2Q6IE36 1432 aa28.25■■■□□ 2.11
SHD-201ENST00000543264 CKAP2LQ8IYA6 745 aa28.24■■■□□ 2.11
SHD-201ENST00000543264 LRMPQ12912 555 aa28.24■■■□□ 2.11
SHD-201ENST00000543264 ME3Q16798 604 aa28.24■■■□□ 2.11
SHD-201ENST00000543264 LARP1BQ659C4 914 aaKnown RBP28.24■■■□□ 2.11
SHD-201ENST00000543264 EYA1Q99502 592 aa28.24■■■□□ 2.11
SHD-201ENST00000543264 SH2B1Q9NRF2 756 aaPredicted RBP28.23■■■□□ 2.11
SHD-201ENST00000543264 RGPD1P0DJD0 1748 aa28.23■■■□□ 2.11
SHD-201ENST00000543264 ST3GAL1Q11201 340 aa28.23■■■□□ 2.11
SHD-201ENST00000543264 C16orf45Q96MC5 204 aaPredicted RBP28.23■■■□□ 2.11
SHD-201ENST00000543264 PODXL2Q9NZ53 605 aa28.23■■■□□ 2.11
SHD-201ENST00000543264 KIF20AO95235 890 aa28.22■■■□□ 2.11
SHD-201ENST00000543264 KRT85P78386 507 aa28.22■■■□□ 2.11
SHD-201ENST00000543264 NRBP1Q9UHY1 535 aa28.22■■■□□ 2.11
SHD-201ENST00000543264 ZSWIM6Q9HCJ5 1215 aa28.21■■■□□ 2.11
SHD-201ENST00000543264 NBPF7P0C2Y1 421 aaPredicted RBP28.2■■■□□ 2.11
SHD-201ENST00000543264 RUFY2Q8WXA3 655 aa28.2■■■□□ 2.11
SHD-201ENST00000543264 GNAT3A8MTJ3 354 aa28.2■■■□□ 2.1
SHD-201ENST00000543264 NCBP1Q09161 790 aaKnown RBP28.2■■■□□ 2.1
SHD-201ENST00000543264 OS9Q13438 667 aaPredicted RBP28.2■■■□□ 2.1
SHD-201ENST00000543264 ANO6Q4KMQ2 910 aa28.2■■■□□ 2.1
SHD-201ENST00000543264 TNMDQ9H2S6 317 aa28.2■■■□□ 2.1
SHD-201ENST00000543264 CBX8Q9HC52 389 aa28.2■■■□□ 2.1
SHD-201ENST00000543264 HDGFL1Q5TGJ6 251 aa28.19■■■□□ 2.1
SHD-201ENST00000543264 TRIM5Q9C035 493 aa28.19■■■□□ 2.1
SHD-201ENST00000543264 AMPHP49418 695 aa28.19■■■□□ 2.1
SHD-201ENST00000543264 CDC37L1Q7L3B6 337 aa28.19■■■□□ 2.1
SHD-201ENST00000543264 DACT1Q9NYF0 836 aa28.19■■■□□ 2.1
SHD-201ENST00000543264 GOLGA6L4A6NEF3 574 aa28.18■■■□□ 2.1
SHD-201ENST00000543264 GLRX3O76003 335 aaKnown RBP28.18■■■□□ 2.1
SHD-201ENST00000543264 SIRT1Q96EB6 747 aa28.17■■■□□ 2.1
SHD-201ENST00000543264 TFIP11Q9UBB9 837 aaKnown RBP28.17■■■□□ 2.1
SHD-201ENST00000543264 TPCN1Q9ULQ1 816 aa28.17■■■□□ 2.1
SHD-201ENST00000543264 TNNT1P13805 278 aa28.17■■■□□ 2.1
SHD-201ENST00000543264 MLECQ14165 292 aa28.17■■■□□ 2.1
SHD-201ENST00000543264 FEZ1Q99689 392 aa28.17■■■□□ 2.1
SHD-201ENST00000543264 TM6SF1Q9BZW5 370 aa28.17■■■□□ 2.1
SHD-201ENST00000543264 IL17REQ8NFR9 667 aa28.16■■■□□ 2.1
SHD-201ENST00000543264 SPATA31D1Q6ZQQ2 1576 aa28.16■■■□□ 2.1
SHD-201ENST00000543264 FAM208AQ9UK61 1670 aaKnown RBP28.16■■■□□ 2.1
SHD-201ENST00000543264 USP31Q70CQ4 1352 aa28.16■■■□□ 2.1
SHD-201ENST00000543264 NRXN3Q9Y4C0 1643 aa28.16■■■□□ 2.1
SHD-201ENST00000543264 HTATSF1O43719 755 aaKnown RBP28.15■■■□□ 2.1
SHD-201ENST00000543264 EIF2S2P20042 333 aaKnown RBP28.15■■■□□ 2.1
SHD-201ENST00000543264 KCNJ4P48050 445 aa28.15■■■□□ 2.1
SHD-201ENST00000543264 KDRP35968 1356 aa28.15■■■□□ 2.1
SHD-201ENST00000543264 MAP3K5Q99683 1374 aa28.15■■■□□ 2.1
SHD-201ENST00000543264 SMTNL1A8MU46 457 aa28.15■■■□□ 2.1
SHD-201ENST00000543264 ZKSCAN1P17029 563 aaPredicted RBP28.15■■■□□ 2.1
SHD-201ENST00000543264 NAA30Q147X3 362 aaPredicted RBP28.15■■■□□ 2.1
SHD-201ENST00000543264 TAF7Q15545 349 aaPredicted RBP28.15■■■□□ 2.1
SHD-201ENST00000543264 ZSCAN25Q6NSZ9 544 aa28.15■■■□□ 2.1
SHD-201ENST00000543264 ZNF75DP51815 510 aa28.14■■■□□ 2.1
SHD-201ENST00000543264 OGFRQ9NZT2 677 aa28.14■■■□□ 2.1
SHD-201ENST00000543264 USP6P35125 1406 aa28.14■■■□□ 2.1
SHD-201ENST00000543264 PLEKHG3A1L390 1219 aa28.14■■■□□ 2.1
SHD-201ENST00000543264 BCL11BQ9C0K0 894 aaPredicted RBP28.14■■■□□ 2.1
SHD-201ENST00000543264 NECTIN1Q15223 517 aa28.13■■■□□ 2.09
SHD-201ENST00000543264 CEP170BQ9Y4F5 1589 aaPredicted RBP28.13■■■□□ 2.09
SHD-201ENST00000543264 TTC41PQ6P2S7 1318 aa28.13■■■□□ 2.09
SHD-201ENST00000543264 IGSF1Q8N6C5 1336 aa28.13■■■□□ 2.09
SHD-201ENST00000543264 SPATA32Q96LK8 384 aa28.13■■■□□ 2.09
SHD-201ENST00000543264 FLT4P35916 1363 aa28.13■■■□□ 2.09
SHD-201ENST00000543264 ELP1O95163 1332 aa28.13■■■□□ 2.09
SHD-201ENST00000543264 A0A0U1RQG5 324 aaPredicted RBP28.12■■■□□ 2.09
SHD-201ENST00000543264 COL9A3Q14050 684 aaPredicted RBP28.12■■■□□ 2.09
SHD-201ENST00000543264 HSP90AB4PQ58FF6 505 aa28.12■■■□□ 2.09
SHD-201ENST00000543264 PXDNLA1KZ92 1463 aa28.12■■■□□ 2.09
SHD-201ENST00000543264 RBM8AQ9Y5S9 174 aaKnown RBP28.12■■■□□ 2.09
SHD-201ENST00000543264 ROBO2Q9HCK4 1378 aa28.12■■■□□ 2.09
SHD-201ENST00000543264 CACNA1FO60840 1977 aa28.12■■■□□ 2.09
SHD-201ENST00000543264 TPD52L1Q16890 204 aaPredicted RBP28.11■■■□□ 2.09
SHD-201ENST00000543264 PLA2G4DQ86XP0 818 aa28.11■■■□□ 2.09
SHD-201ENST00000543264 CLASRPQ8N2M8 674 aaKnown RBP28.11■■■□□ 2.09
SHD-201ENST00000543264 TCEANC2Q96MN5 208 aa28.11■■■□□ 2.09
SHD-201ENST00000543264 CREB3L3Q68CJ9 461 aa28.11■■■□□ 2.09
SHD-201ENST00000543264 CTNNA3Q9UI47 895 aa28.11■■■□□ 2.09
SHD-201ENST00000543264 KCNB2Q92953 911 aa28.1■■■□□ 2.09
SHD-201ENST00000543264 SBNO1A3KN83 1393 aa28.1■■■□□ 2.09
SHD-201ENST00000543264 PDCP20941 246 aa28.1■■■□□ 2.09
SHD-201ENST00000543264 CCDC112Q8NEF3 446 aa28.1■■■□□ 2.09
SHD-201ENST00000543264 CCDC171Q6TFL3 1326 aa28.1■■■□□ 2.09
SHD-201ENST00000543264 ZNF165P49910 485 aa28.09■■■□□ 2.09
SHD-201ENST00000543264 CACTINQ8WUQ7 758 aaKnown RBP28.09■■■□□ 2.09
SHD-201ENST00000543264 ZNF592Q92610 1267 aa28.09■■■□□ 2.09
SHD-201ENST00000543264 SCAND2PQ9GZW5 306 aaPredicted RBP28.09■■■□□ 2.09
SHD-201ENST00000543264 DNAJC25Q9H1X3 360 aa28.09■■■□□ 2.09
SHD-201ENST00000543264 ECHDC1Q9NTX5 307 aa28.09■■■□□ 2.09
SHD-201ENST00000543264 CLIP2Q9UDT6 1046 aa28.09■■■□□ 2.09
SHD-201ENST00000543264 PPP6R1Q9UPN7 881 aa28.09■■■□□ 2.09
SHD-201ENST00000543264 USP42Q9H9J4 1324 aaKnown RBP28.09■■■□□ 2.09
SHD-201ENST00000543264 ZNF771Q7L3S4 317 aaPredicted RBP28.09■■■□□ 2.09
SHD-201ENST00000543264 TTC21AQ8NDW8 1320 aa28.09■■■□□ 2.09
SHD-201ENST00000543264 PI4KAP2A4QPH2 592 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms