RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 MTFR1LQ9H019 292 aa15.57■□□□□ 0.08
DDX55-210ENST00000543016 TBC1D2BQ9UPU7 963 aa15.57■□□□□ 0.08
DDX55-210ENST00000543016 MAP3K15Q6ZN16 1313 aa15.57■□□□□ 0.08
DDX55-210ENST00000543016 PSDA5PKW4 1024 aaPredicted RBP15.56■□□□□ 0.08
DDX55-210ENST00000543016 CAMTA2O94983 1202 aa15.56■□□□□ 0.08
DDX55-210ENST00000543016 ANXA1P04083 346 aa15.56■□□□□ 0.08
DDX55-210ENST00000543016 RARSP54136 660 aaKnown RBP15.56■□□□□ 0.08
DDX55-210ENST00000543016 ANKRD13DQ6ZTN6 518 aa15.56■□□□□ 0.08
DDX55-210ENST00000543016 PTPRCP08575 1304 aa15.55■□□□□ 0.08
DDX55-210ENST00000543016 GYS1P13807 737 aa15.55■□□□□ 0.08
DDX55-210ENST00000543016 FLIIQ13045 1269 aa15.55■□□□□ 0.08
DDX55-210ENST00000543016 USPL1Q5W0Q7 1092 aa15.55■□□□□ 0.08
DDX55-210ENST00000543016 MRPL50Q8N5N7 158 aaKnown RBP15.55■□□□□ 0.08
DDX55-210ENST00000543016 SMC4Q9NTJ3 1288 aa15.55■□□□□ 0.08
DDX55-210ENST00000543016 KIF16BQ96L93 1317 aa15.54■□□□□ 0.08
DDX55-210ENST00000543016 AIMP1Q12904 312 aaKnown RBP15.54■□□□□ 0.08
DDX55-210ENST00000543016 KSR2Q6VAB6 950 aa15.54■□□□□ 0.08
DDX55-210ENST00000543016 GIGYF2Q6Y7W6 1299 aaKnown RBP15.54■□□□□ 0.08
DDX55-210ENST00000543016 TTLL7Q6ZT98 887 aa15.54■□□□□ 0.08
DDX55-210ENST00000543016 TUBGCP6Q96RT7 1819 aa15.53■□□□□ 0.08
DDX55-210ENST00000543016 TCERG1O14776 1098 aaKnown RBP15.53■□□□□ 0.08
DDX55-210ENST00000543016 IPO8O15397 1037 aaKnown RBP15.53■□□□□ 0.08
DDX55-210ENST00000543016 SMIM5Q71RC9 77 aa15.53■□□□□ 0.08
DDX55-210ENST00000543016 RIC3Q7Z5B4 369 aa15.53■□□□□ 0.08
DDX55-210ENST00000543016 ARHGAP45Q92619 1136 aa15.53■□□□□ 0.08
DDX55-210ENST00000543016 PHAXQ9H814 394 aaKnown RBP15.53■□□□□ 0.08
DDX55-210ENST00000543016 SRP68Q9UHB9 627 aaKnown RBP15.53■□□□□ 0.08
DDX55-210ENST00000543016 POLD1P28340 1107 aa15.52■□□□□ 0.08
DDX55-210ENST00000543016 FKBP5Q13451 457 aaPredicted RBP15.52■□□□□ 0.08
DDX55-210ENST00000543016 RNF39Q9H2S5 420 aa15.52■□□□□ 0.08
DDX55-210ENST00000543016 BCL2L12Q9HB09 334 aa15.52■□□□□ 0.08
DDX55-210ENST00000543016 SPON1Q9HCB6 807 aa15.52■□□□□ 0.08
DDX55-210ENST00000543016 CASZ1Q86V15 1759 aa15.52■□□□□ 0.07
DDX55-210ENST00000543016 TM4SF1P30408 202 aa15.51■□□□□ 0.07
DDX55-210ENST00000543016 TRIM28Q13263 835 aaKnown RBP15.51■□□□□ 0.07
DDX55-210ENST00000543016 TCIRG1Q13488 830 aa15.51■□□□□ 0.07
DDX55-210ENST00000543016 FKBP8Q14318 412 aa15.51■□□□□ 0.07
DDX55-210ENST00000543016 PARP10Q53GL7 1025 aa15.51■□□□□ 0.07
DDX55-210ENST00000543016 G2E3Q7L622 706 aa15.51■□□□□ 0.07
DDX55-210ENST00000543016 SETDB2Q96T68 719 aa15.51■□□□□ 0.07
DDX55-210ENST00000543016 API5Q9BZZ5 524 aaKnown RBP15.51■□□□□ 0.07
DDX55-210ENST00000543016 PDGFDQ9GZP0 370 aaPredicted RBP15.51■□□□□ 0.07
DDX55-210ENST00000543016 ZBTB3Q9H5J0 574 aa15.51■□□□□ 0.07
DDX55-210ENST00000543016 RCAN3Q9UKA8 241 aa15.51■□□□□ 0.07
DDX55-210ENST00000543016 C4AP0C0L4 1744 aa15.51■□□□□ 0.07
DDX55-210ENST00000543016 ATP10DQ9P241 1426 aa15.51■□□□□ 0.07
DDX55-210ENST00000543016 PI4KAP2A4QPH2 592 aa15.5■□□□□ 0.07
DDX55-210ENST00000543016 ZBTB7AO95365 584 aa15.5■□□□□ 0.07
DDX55-210ENST00000543016 NEXNQ0ZGT2 675 aa15.5■□□□□ 0.07
DDX55-210ENST00000543016 PI4KAP1Q8N8J0 262 aa15.5■□□□□ 0.07
DDX55-210ENST00000543016 METTL22Q9BUU2 404 aaPredicted RBP15.5■□□□□ 0.07
DDX55-210ENST00000543016 HLFQ16534 295 aa15.49■□□□□ 0.07
DDX55-210ENST00000543016 ZNF34Q8IZ26 560 aa15.49■□□□□ 0.07
DDX55-210ENST00000543016 DNAAF4Q8WXU2 420 aa15.49■□□□□ 0.07
DDX55-210ENST00000543016 BCL2L13Q9BXK5 485 aa15.49■□□□□ 0.07
DDX55-210ENST00000543016 MAP3K2Q9Y2U5 619 aa15.49■□□□□ 0.07
DDX55-210ENST00000543016 SCN7AQ01118 1682 aa15.48■□□□□ 0.07
DDX55-210ENST00000543016 MMP10P09238 476 aa15.48■□□□□ 0.07
DDX55-210ENST00000543016 NFIXQ14938 502 aa15.48■□□□□ 0.07
DDX55-210ENST00000543016 TBC1D9BQ66K14 1250 aa15.48■□□□□ 0.07
DDX55-210ENST00000543016 NOB1Q9ULX3 412 aaKnown RBP15.48■□□□□ 0.07
DDX55-210ENST00000543016 NIP7Q9Y221 180 aaKnown RBP eCLIP15.48■□□□□ 0.07
DDX55-210ENST00000543016 PARP3Q9Y6F1 533 aa15.48■□□□□ 0.07
DDX55-210ENST00000543016 ADCY9O60503 1353 aa15.48■□□□□ 0.07
DDX55-210ENST00000543016 CARMIL3Q8ND23 1372 aa15.48■□□□□ 0.07
DDX55-210ENST00000543016 RNF123Q5XPI4 1314 aa15.47■□□□□ 0.07
DDX55-210ENST00000543016 BCORQ6W2J9 1755 aa15.47■□□□□ 0.07
DDX55-210ENST00000543016 MS4A1P11836 297 aa15.47■□□□□ 0.07
DDX55-210ENST00000543016 PPP1R42Q7Z4L9 355 aa15.47■□□□□ 0.07
DDX55-210ENST00000543016 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.47■□□□□ 0.07
DDX55-210ENST00000543016 CCDC191Q8NCU4 936 aa15.47■□□□□ 0.07
DDX55-210ENST00000543016 ISCA1Q9BUE6 129 aa15.47■□□□□ 0.07
DDX55-210ENST00000543016 NYXQ9GZU5 481 aa15.47■□□□□ 0.07
DDX55-210ENST00000543016 ATF5Q9Y2D1 282 aaPredicted RBP15.47■□□□□ 0.07
DDX55-210ENST00000543016 IBTKQ9P2D0 1353 aaPredicted RBP15.47■□□□□ 0.07
DDX55-210ENST00000543016 BCAR3O75815 825 aa15.46■□□□□ 0.07
DDX55-210ENST00000543016 ZKSCAN2Q63HK3 967 aa15.46■□□□□ 0.07
DDX55-210ENST00000543016 MSL1Q68DK7 614 aa15.46■□□□□ 0.07
DDX55-210ENST00000543016 TPTE2Q6XPS3 522 aa15.46■□□□□ 0.07
DDX55-210ENST00000543016 LINS1Q8NG48 757 aa15.46■□□□□ 0.07
DDX55-210ENST00000543016 SGIP1Q9BQI5 828 aa15.46■□□□□ 0.07
DDX55-210ENST00000543016 COL24A1Q17RW2 1714 aa15.46■□□□□ 0.06
DDX55-210ENST00000543016 POLRMTO00411 1230 aaKnown RBP15.45■□□□□ 0.06
DDX55-210ENST00000543016 ALDH1L1O75891 902 aa15.45■□□□□ 0.06
DDX55-210ENST00000543016 HSP90B1P14625 803 aaKnown RBP15.45■□□□□ 0.06
DDX55-210ENST00000543016 PTGER2P43116 358 aa15.45■□□□□ 0.06
DDX55-210ENST00000543016 ATF7IPQ6VMQ6 1270 aa15.45■□□□□ 0.06
DDX55-210ENST00000543016 NLRP10Q86W26 655 aa15.45■□□□□ 0.06
DDX55-210ENST00000543016 SERPINB2P05120 415 aa15.44■□□□□ 0.06
DDX55-210ENST00000543016 CCT4P50991 539 aaKnown RBP15.44■□□□□ 0.06
DDX55-210ENST00000543016 DDR1Q08345 913 aa15.44■□□□□ 0.06
DDX55-210ENST00000543016 BICDL1Q6ZP65 573 aa15.44■□□□□ 0.06
DDX55-210ENST00000543016 NBPF5PQ86XG9 351 aaPredicted RBP15.44■□□□□ 0.06
DDX55-210ENST00000543016 MYD88Q99836 296 aa15.44■□□□□ 0.06
DDX55-210ENST00000543016 UTP14AQ9BVJ6 771 aaKnown RBP15.44■□□□□ 0.06
DDX55-210ENST00000543016 CWC25Q9NXE8 425 aaPredicted RBP15.44■□□□□ 0.06
DDX55-210ENST00000543016 NUP98P52948 1817 aa15.43■□□□□ 0.06
DDX55-210ENST00000543016 GPTP24298 496 aa15.43■□□□□ 0.06
DDX55-210ENST00000543016 BEND3Q5T5X7 828 aa15.43■□□□□ 0.06
DDX55-210ENST00000543016 FRAT1Q92837 279 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms