RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 LRP10Q7Z4F1 713 aa16.67■□□□□ 0.26
SLC3A2-220ENST00000542922 KLHDC4Q8TBB5 520 aa16.67■□□□□ 0.26
SLC3A2-220ENST00000542922 ZDHHC9Q9Y397 364 aa16.67■□□□□ 0.26
SLC3A2-220ENST00000542922 USP42Q9H9J4 1324 aaKnown RBP16.66■□□□□ 0.26
SLC3A2-220ENST00000542922 DDX58O95786 925 aaKnown RBP16.66■□□□□ 0.26
SLC3A2-220ENST00000542922 HSP90AB4PQ58FF6 505 aa16.66■□□□□ 0.26
SLC3A2-220ENST00000542922 BRINP3Q76B58 766 aa16.66■□□□□ 0.26
SLC3A2-220ENST00000542922 UTYO14607 1347 aa16.66■□□□□ 0.26
SLC3A2-220ENST00000542922 MCCP23508 829 aa16.65■□□□□ 0.26
SLC3A2-220ENST00000542922 EPHA10Q5JZY3 1008 aa16.65■□□□□ 0.26
SLC3A2-220ENST00000542922 L1TD1Q5T7N2 865 aaKnown RBP16.65■□□□□ 0.26
SLC3A2-220ENST00000542922 CLEC17AQ6ZS10 378 aa16.65■□□□□ 0.26
SLC3A2-220ENST00000542922 MYD88Q99836 296 aa16.65■□□□□ 0.26
SLC3A2-220ENST00000542922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.65■□□□□ 0.26
SLC3A2-220ENST00000542922 ABCC6O95255 1503 aa16.65■□□□□ 0.26
SLC3A2-220ENST00000542922 NEURL1BA8MQ27 555 aa16.65■□□□□ 0.26
SLC3A2-220ENST00000542922 SGSM2O43147 1006 aa16.65■□□□□ 0.26
SLC3A2-220ENST00000542922 SASH1O94885 1247 aa16.65■□□□□ 0.26
SLC3A2-220ENST00000542922 CWC27Q6UX04 472 aaKnown RBP16.65■□□□□ 0.26
SLC3A2-220ENST00000542922 SIL1Q9H173 461 aa16.65■□□□□ 0.26
SLC3A2-220ENST00000542922 CNTROBQ8N137 903 aa16.64■□□□□ 0.25
SLC3A2-220ENST00000542922 CLASRPQ8N2M8 674 aaKnown RBP16.64■□□□□ 0.25
SLC3A2-220ENST00000542922 DCAF5Q96JK2 942 aa16.64■□□□□ 0.25
SLC3A2-220ENST00000542922 AFDNP55196 1824 aaKnown RBP16.64■□□□□ 0.25
SLC3A2-220ENST00000542922 HSPA4P34932 840 aa16.64■□□□□ 0.25
SLC3A2-220ENST00000542922 FOXD4L5Q5VV16 416 aaPredicted RBP16.64■□□□□ 0.25
SLC3A2-220ENST00000542922 MCTP1Q6DN14 999 aa16.64■□□□□ 0.25
SLC3A2-220ENST00000542922 AACSQ86V21 672 aa16.64■□□□□ 0.25
SLC3A2-220ENST00000542922 FOXD4L4Q8WXT5 416 aaPredicted RBP16.64■□□□□ 0.25
SLC3A2-220ENST00000542922 LSG1Q9H089 658 aaKnown RBP16.64■□□□□ 0.25
SLC3A2-220ENST00000542922 TLR7Q9NYK1 1049 aaKnown RBP16.64■□□□□ 0.25
SLC3A2-220ENST00000542922 CPDO75976 1380 aa16.63■□□□□ 0.25
SLC3A2-220ENST00000542922 ANAPC15P60006 121 aa16.63■□□□□ 0.25
SLC3A2-220ENST00000542922 NUCB2P80303 420 aa16.63■□□□□ 0.25
SLC3A2-220ENST00000542922 GAS2L3Q86XJ1 694 aa16.63■□□□□ 0.25
SLC3A2-220ENST00000542922 TTC5Q8N0Z6 440 aa16.63■□□□□ 0.25
SLC3A2-220ENST00000542922 TTC41PQ6P2S7 1318 aa16.63■□□□□ 0.25
SLC3A2-220ENST00000542922 RAD50Q92878 1312 aa16.63■□□□□ 0.25
SLC3A2-220ENST00000542922 ARFGEF2Q9Y6D5 1785 aa16.63■□□□□ 0.25
SLC3A2-220ENST00000542922 GLRX3O76003 335 aaKnown RBP16.62■□□□□ 0.25
SLC3A2-220ENST00000542922 GCKRQ14397 625 aa16.62■□□□□ 0.25
SLC3A2-220ENST00000542922 LARP1Q6PKG0 1096 aaKnown RBP16.62■□□□□ 0.25
SLC3A2-220ENST00000542922 EAF2Q96CJ1 260 aaPredicted RBP16.62■□□□□ 0.25
SLC3A2-220ENST00000542922 SNRPA1P09661 255 aaKnown RBP16.62■□□□□ 0.25
SLC3A2-220ENST00000542922 RASEFQ8IZ41 740 aa16.62■□□□□ 0.25
SLC3A2-220ENST00000542922 METTL22Q9BUU2 404 aaPredicted RBP16.62■□□□□ 0.25
SLC3A2-220ENST00000542922 CCDC8Q9H0W5 538 aaPredicted RBP16.62■□□□□ 0.25
SLC3A2-220ENST00000542922 CWC22Q9HCG8 908 aaKnown RBP16.62■□□□□ 0.25
SLC3A2-220ENST00000542922 ECHDC1Q9NTX5 307 aa16.62■□□□□ 0.25
SLC3A2-220ENST00000542922 IFIT2P09913 472 aaKnown RBP16.61■□□□□ 0.25
SLC3A2-220ENST00000542922 CABP4P57796 275 aa16.61■□□□□ 0.25
SLC3A2-220ENST00000542922 IL17RAQ96F46 866 aa16.61■□□□□ 0.25
SLC3A2-220ENST00000542922 PARP4Q9UKK3 1724 aaKnown RBP16.61■□□□□ 0.25
SLC3A2-220ENST00000542922 SNX14Q9Y5W7 946 aa16.61■□□□□ 0.25
SLC3A2-220ENST00000542922 LAMB4A4D0S4 1761 aa16.6■□□□□ 0.25
SLC3A2-220ENST00000542922 ATP5J2-PTCD1G3V325 749 aa16.6■□□□□ 0.25
SLC3A2-220ENST00000542922 PTCD1O75127 700 aaKnown RBP16.6■□□□□ 0.25
SLC3A2-220ENST00000542922 CUL4AQ13619 759 aa16.6■□□□□ 0.25
SLC3A2-220ENST00000542922 ANKRD13DQ6ZTN6 518 aa16.6■□□□□ 0.25
SLC3A2-220ENST00000542922 ERC1Q8IUD2 1116 aa16.6■□□□□ 0.25
SLC3A2-220ENST00000542922 FMNL2Q96PY5 1086 aa16.6■□□□□ 0.25
SLC3A2-220ENST00000542922 STRCQ7RTU9 1775 aa16.6■□□□□ 0.25
SLC3A2-220ENST00000542922 NEXNQ0ZGT2 675 aa16.6■□□□□ 0.25
SLC3A2-220ENST00000542922 PRDM11Q9NQV5 511 aa16.6■□□□□ 0.25
SLC3A2-220ENST00000542922 PTH1RQ03431 593 aa16.59■□□□□ 0.25
SLC3A2-220ENST00000542922 G3BP1Q13283 466 aaKnown RBP eCLIP16.59■□□□□ 0.25
SLC3A2-220ENST00000542922 SKOR2Q2VWA4 1001 aaPredicted RBP16.59■□□□□ 0.25
SLC3A2-220ENST00000542922 LARP6Q9BRS8 491 aaKnown RBP16.59■□□□□ 0.25
SLC3A2-220ENST00000542922 GOLGA6L22H0YM25 854 aa16.58■□□□□ 0.25
SLC3A2-220ENST00000542922 CPA1P15085 419 aa16.58■□□□□ 0.25
SLC3A2-220ENST00000542922 DIAPH3Q9NSV4 1193 aa16.58■□□□□ 0.25
SLC3A2-220ENST00000542922 LMBRD1Q9NUN5 540 aa16.58■□□□□ 0.25
SLC3A2-220ENST00000542922 DDX49Q9Y6V7 483 aaKnown RBP16.58■□□□□ 0.25
SLC3A2-220ENST00000542922 WDR17Q8IZU2 1322 aa16.58■□□□□ 0.24
SLC3A2-220ENST00000542922 ZNF335Q9H4Z2 1342 aaPredicted RBP16.58■□□□□ 0.24
SLC3A2-220ENST00000542922 TOM1L2Q6ZVM7 507 aa16.58■□□□□ 0.24
SLC3A2-220ENST00000542922 UBE3BQ7Z3V4 1068 aa16.58■□□□□ 0.24
SLC3A2-220ENST00000542922 GRPEL1Q9HAV7 217 aa16.58■□□□□ 0.24
SLC3A2-220ENST00000542922 ABCA3Q99758 1704 aa16.58■□□□□ 0.24
SLC3A2-220ENST00000542922 SHANK3Q9BYB0 1731 aa16.57■□□□□ 0.24
SLC3A2-220ENST00000542922 NBPF26B4DH59 902 aa16.57■□□□□ 0.24
SLC3A2-220ENST00000542922 MCM2P49736 904 aa16.57■□□□□ 0.24
SLC3A2-220ENST00000542922 NBPF14Q5TI25 921 aa16.57■□□□□ 0.24
SLC3A2-220ENST00000542922 NBPF10Q6P3W6 841 aaKnown RBP16.57■□□□□ 0.24
SLC3A2-220ENST00000542922 NBPF15Q8N660 670 aa16.57■□□□□ 0.24
SLC3A2-220ENST00000542922 HDAC5Q9UQL6 1122 aa16.57■□□□□ 0.24
SLC3A2-220ENST00000542922 COL5A2P05997 1499 aaPredicted RBP16.57■□□□□ 0.24
SLC3A2-220ENST00000542922 FAM227BQ96M60 508 aa16.57■□□□□ 0.24
SLC3A2-220ENST00000542922 PTMSP20962 102 aa16.56■□□□□ 0.24
SLC3A2-220ENST00000542922 KLHL40Q2TBA0 621 aa16.56■□□□□ 0.24
SLC3A2-220ENST00000542922 GPATCH3Q96I76 525 aa16.56■□□□□ 0.24
SLC3A2-220ENST00000542922 BOLA2Q9H3K6 86 aa16.56■□□□□ 0.24
SLC3A2-220ENST00000542922 DTNBO60941 627 aa16.55■□□□□ 0.24
SLC3A2-220ENST00000542922 RFX5P48382 616 aaPredicted RBP16.55■□□□□ 0.24
SLC3A2-220ENST00000542922 MRE11P49959 708 aa16.55■□□□□ 0.24
SLC3A2-220ENST00000542922 TTC14Q96N46 770 aa16.55■□□□□ 0.24
SLC3A2-220ENST00000542922 UBR2Q8IWV8 1755 aa16.55■□□□□ 0.24
SLC3A2-220ENST00000542922 EPB41L2O43491 1005 aaKnown RBP16.55■□□□□ 0.24
SLC3A2-220ENST00000542922 PRPF40AO75400 957 aaKnown RBP16.55■□□□□ 0.24
SLC3A2-220ENST00000542922 KIAA1211Q6ZU35 1233 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms