RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 AIDAQ96BJ3 306 aa15.2■□□□□ 0.02
SRGAP1-205ENST00000542841 NUDCQ9Y266 331 aa15.2■□□□□ 0.02
SRGAP1-205ENST00000542841 FER1L6Q2WGJ9 1857 aa15.19■□□□□ 0.02
SRGAP1-205ENST00000542841 MTHFSDQ2M296 383 aaKnown RBP15.19■□□□□ 0.02
SRGAP1-205ENST00000542841 CCDC24Q8N4L8 307 aa15.19■□□□□ 0.02
SRGAP1-205ENST00000542841 ZNF330Q9Y3S2 320 aaPredicted RBP15.19■□□□□ 0.02
SRGAP1-205ENST00000542841 DICER1Q9UPY3 1922 aaKnown RBP15.19■□□□□ 0.02
SRGAP1-205ENST00000542841 CTCFP49711 727 aaPredicted RBP15.18■□□□□ 0.02
SRGAP1-205ENST00000542841 STYK1Q6J9G0 422 aa15.18■□□□□ 0.02
SRGAP1-205ENST00000542841 NPM2Q86SE8 214 aaKnown RBP15.18■□□□□ 0.02
SRGAP1-205ENST00000542841 LDHDQ86WU2 507 aa15.18■□□□□ 0.02
SRGAP1-205ENST00000542841 CNBD1Q8NA66 436 aa15.18■□□□□ 0.02
SRGAP1-205ENST00000542841 SETDB2Q96T68 719 aa15.18■□□□□ 0.02
SRGAP1-205ENST00000542841 TEX13AQ9BXU3 409 aaPredicted RBP15.18■□□□□ 0.02
SRGAP1-205ENST00000542841 ADAMTS8Q9UP79 889 aa15.18■□□□□ 0.02
SRGAP1-205ENST00000542841 TBC1D2BQ9UPU7 963 aa15.18■□□□□ 0.02
SRGAP1-205ENST00000542841 ANKRD31Q8N7Z5 1873 aa15.18■□□□□ 0.02
SRGAP1-205ENST00000542841 PASKQ96RG2 1323 aa15.17■□□□□ 0.02
SRGAP1-205ENST00000542841 ST5P78524 1137 aa15.17■□□□□ 0.02
SRGAP1-205ENST00000542841 PRPF40BQ6NWY9 871 aaKnown RBP15.17■□□□□ 0.02
SRGAP1-205ENST00000542841 TMEM88BA6NKF7 163 aa15.16■□□□□ 0.02
SRGAP1-205ENST00000542841 SRGNP10124 158 aa15.16■□□□□ 0.02
SRGAP1-205ENST00000542841 IL6STP40189 918 aaPredicted RBP15.16■□□□□ 0.02
SRGAP1-205ENST00000542841 VEGFBP49765 207 aa15.16■□□□□ 0.02
SRGAP1-205ENST00000542841 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
SRGAP1-205ENST00000542841 MASTLQ96GX5 879 aa15.16■□□□□ 0.02
SRGAP1-205ENST00000542841 ZNF496Q96IT1 587 aaPredicted RBP15.16■□□□□ 0.02
SRGAP1-205ENST00000542841 L3MBTL3Q96JM7 780 aaPredicted RBP15.16■□□□□ 0.02
SRGAP1-205ENST00000542841 TAF1DQ9H5J8 278 aaPredicted RBP15.16■□□□□ 0.02
SRGAP1-205ENST00000542841 UBR2Q8IWV8 1755 aa15.16■□□□□ 0.02
SRGAP1-205ENST00000542841 COL11A2P13942 1736 aaPredicted RBP15.15■□□□□ 0.02
SRGAP1-205ENST00000542841 HEG1Q9ULI3 1381 aa15.15■□□□□ 0.02
SRGAP1-205ENST00000542841 DIAPH1O60610 1272 aaKnown RBP15.15■□□□□ 0.02
SRGAP1-205ENST00000542841 TEFQ10587 303 aa15.15■□□□□ 0.02
SRGAP1-205ENST00000542841 ZNF790Q6PG37 636 aa15.15■□□□□ 0.02
SRGAP1-205ENST00000542841 PNNQ9H307 717 aaKnown RBP15.15■□□□□ 0.02
SRGAP1-205ENST00000542841 SCN7AQ01118 1682 aa15.15■□□□□ 0.02
SRGAP1-205ENST00000542841 VIRMAQ69YN4 1812 aaKnown RBP15.15■□□□□ 0.02
SRGAP1-205ENST00000542841 EAPPQ56P03 285 aaPredicted RBP15.14■□□□□ 0.01
SRGAP1-205ENST00000542841 ITGBL1O95965 494 aaPredicted RBP15.13■□□□□ 0.01
SRGAP1-205ENST00000542841 WBP1LQ9NX94 342 aa15.13■□□□□ 0.01
SRGAP1-205ENST00000542841 SCN4AP35499 1836 aa15.13■□□□□ 0.01
SRGAP1-205ENST00000542841 SLX4Q8IY92 1834 aa15.13■□□□□ 0.01
SRGAP1-205ENST00000542841 CAMTA2O94983 1202 aa15.12■□□□□ 0.01
SRGAP1-205ENST00000542841 A1BGP04217 495 aa15.12■□□□□ 0.01
SRGAP1-205ENST00000542841 LBX1P52954 281 aa15.12■□□□□ 0.01
SRGAP1-205ENST00000542841 CCDC93Q567U6 631 aa15.12■□□□□ 0.01
SRGAP1-205ENST00000542841 FMNL2Q96PY5 1086 aa15.12■□□□□ 0.01
SRGAP1-205ENST00000542841 HACL1Q9UJ83 578 aa15.12■□□□□ 0.01
SRGAP1-205ENST00000542841 CLEC11AQ9Y240 323 aa15.12■□□□□ 0.01
SRGAP1-205ENST00000542841 PNMA8AQ86V59 439 aaPredicted RBP15.11■□□□□ 0.01
SRGAP1-205ENST00000542841 NBPF5PQ86XG9 351 aaPredicted RBP15.11■□□□□ 0.01
SRGAP1-205ENST00000542841 C7orf43Q8WVR3 580 aa15.11■□□□□ 0.01
SRGAP1-205ENST00000542841 RUNDC1Q96C34 613 aa15.11■□□□□ 0.01
SRGAP1-205ENST00000542841 GNAT3A8MTJ3 354 aa15.1■□□□□ 0.01
SRGAP1-205ENST00000542841 NPR1P16066 1061 aa15.1■□□□□ 0.01
SRGAP1-205ENST00000542841 EPHX2P34913 555 aa15.1■□□□□ 0.01
SRGAP1-205ENST00000542841 MAP2K1Q02750 393 aaPredicted RBP15.1■□□□□ 0.01
SRGAP1-205ENST00000542841 FKBP4Q02790 459 aaKnown RBP eCLIP15.1■□□□□ 0.01
SRGAP1-205ENST00000542841 DEFB115Q30KQ5 88 aa15.1■□□□□ 0.01
SRGAP1-205ENST00000542841 DZIP3Q86Y13 1208 aaKnown RBP15.1■□□□□ 0.01
SRGAP1-205ENST00000542841 IL17REQ8NFR9 667 aa15.1■□□□□ 0.01
SRGAP1-205ENST00000542841 ARFGEF2Q9Y6D5 1785 aa15.09■□□□□ 0.01
SRGAP1-205ENST00000542841 RASSF10A6NK89 507 aa15.09■□□□□ 0.01
SRGAP1-205ENST00000542841 U2AF1L5P0DN76 240 aaPredicted RBP15.09■□□□□ 0.01
SRGAP1-205ENST00000542841 U2AF1Q01081 240 aaKnown RBP eCLIP15.09■□□□□ 0.01
SRGAP1-205ENST00000542841 RTKN2Q8IZC4 609 aa15.09■□□□□ 0.01
SRGAP1-205ENST00000542841 CNTROBQ8N137 903 aa15.09■□□□□ 0.01
SRGAP1-205ENST00000542841 GAS2L2Q8NHY3 880 aa15.09■□□□□ 0.01
SRGAP1-205ENST00000542841 ZNF277Q9NRM2 450 aaPredicted RBP15.09■□□□□ 0.01
SRGAP1-205ENST00000542841 ZNF652Q9Y2D9 606 aa15.09■□□□□ 0.01
SRGAP1-205ENST00000542841 CACNA1SQ13698 1873 aa15.09■□□□□ 0.01
SRGAP1-205ENST00000542841 ZNF541Q9H0D2 1346 aa15.09■□□□□ 0.01
SRGAP1-205ENST00000542841 SLC34A2O95436 690 aa15.08■□□□□ 0
SRGAP1-205ENST00000542841 CLEC4GQ6UXB4 293 aa15.08■□□□□ 0
SRGAP1-205ENST00000542841 ABHD8Q96I13 439 aa15.08■□□□□ 0
SRGAP1-205ENST00000542841 KLRG2A4D1S0 409 aaPredicted RBP15.07■□□□□ 0
SRGAP1-205ENST00000542841 BTBD11A6QL63 1104 aa15.07■□□□□ 0
SRGAP1-205ENST00000542841 U2SURPO15042 1029 aaKnown RBP15.07■□□□□ 0
SRGAP1-205ENST00000542841 HSPA8P11142 646 aaKnown RBP15.07■□□□□ 0
SRGAP1-205ENST00000542841 MAP1SQ66K74 1059 aaPredicted RBP15.07■□□□□ 0
SRGAP1-205ENST00000542841 TPTE2Q6XPS3 522 aa15.07■□□□□ 0
SRGAP1-205ENST00000542841 ABT1Q9ULW3 272 aaKnown RBP15.07■□□□□ 0
SRGAP1-205ENST00000542841 RNF123Q5XPI4 1314 aa15.07■□□□□ 0
SRGAP1-205ENST00000542841 WDR33Q9C0J8 1336 aaKnown RBP15.07■□□□□ 0
SRGAP1-205ENST00000542841 FZD9O00144 591 aa15.06■□□□□ 0
SRGAP1-205ENST00000542841 FAM161AQ3B820 660 aa15.06■□□□□ 0
SRGAP1-205ENST00000542841 GPC2Q8N158 579 aa15.06■□□□□ 0
SRGAP1-205ENST00000542841 NEFMP07197 916 aa15.05■□□□□ -0
SRGAP1-205ENST00000542841 ALDH1B1P30837 517 aa15.05■□□□□ -0
SRGAP1-205ENST00000542841 IARSP41252 1262 aaKnown RBP15.05■□□□□ -0
SRGAP1-205ENST00000542841 CCDC27Q2M243 656 aa15.05■□□□□ -0
SRGAP1-205ENST00000542841 USP16Q9Y5T5 823 aa15.05■□□□□ -0
SRGAP1-205ENST00000542841 BCORQ6W2J9 1755 aa15.05■□□□□ -0
SRGAP1-205ENST00000542841 ADAMTSL1Q8N6G6 1762 aa15.05■□□□□ -0
SRGAP1-205ENST00000542841 CEMIPQ8WUJ3 1361 aa15.04■□□□□ -0
SRGAP1-205ENST00000542841 ZNF521Q96K83 1311 aa15.04■□□□□ -0
SRGAP1-205ENST00000542841 MAPK8IP3Q9UPT6 1336 aa15.04■□□□□ -0
SRGAP1-205ENST00000542841 PIP4K2AP48426 406 aaPredicted RBP15.04■□□□□ -0
SRGAP1-205ENST00000542841 OLFM4Q6UX06 510 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms