RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 PTK7Q13308 1070 aa10.04□□□□□ -0.8
XRCC4-206ENST00000542685 SAMD5Q5TGI4 173 aa10.04□□□□□ -0.8
XRCC4-206ENST00000542685 CHMP7Q8WUX9 453 aaPredicted RBP10.04□□□□□ -0.8
XRCC4-206ENST00000542685 C7orf43Q8WVR3 580 aa10.04□□□□□ -0.8
XRCC4-206ENST00000542685 HINFPQ9BQA5 517 aa10.04□□□□□ -0.8
XRCC4-206ENST00000542685 RRAGCQ9HB90 399 aa10.04□□□□□ -0.8
XRCC4-206ENST00000542685 STRN4Q9NRL3 753 aa10.04□□□□□ -0.8
XRCC4-206ENST00000542685 PHF20L1A8MW92 1017 aa10.03□□□□□ -0.8
XRCC4-206ENST00000542685 C21orf2O43822 256 aa10.03□□□□□ -0.8
XRCC4-206ENST00000542685 ARAFP10398 606 aa10.03□□□□□ -0.8
XRCC4-206ENST00000542685 AMPD1P23109 780 aa10.03□□□□□ -0.8
XRCC4-206ENST00000542685 FAM182BQ5T319 152 aa10.03□□□□□ -0.8
XRCC4-206ENST00000542685 SLCO4C1Q6ZQN7 724 aa10.03□□□□□ -0.8
XRCC4-206ENST00000542685 SCG3Q8WXD2 468 aaKnown RBP10.03□□□□□ -0.8
XRCC4-206ENST00000542685 PHACTR1Q9C0D0 580 aa10.03□□□□□ -0.8
XRCC4-206ENST00000542685 MARK1Q9P0L2 795 aa10.03□□□□□ -0.8
XRCC4-206ENST00000542685 PRR12Q9ULL5 1215 aa10.03□□□□□ -0.8
XRCC4-206ENST00000542685 ATAD2Q6PL18 1390 aa10.02□□□□□ -0.8
XRCC4-206ENST00000542685 USP17L15C9J2P7 530 aa10.02□□□□□ -0.81
XRCC4-206ENST00000542685 USP17L10C9JJH3 530 aa10.02□□□□□ -0.81
XRCC4-206ENST00000542685 USP17L13C9JLJ4 530 aa10.02□□□□□ -0.81
XRCC4-206ENST00000542685 USP17L12C9JPN9 530 aa10.02□□□□□ -0.81
XRCC4-206ENST00000542685 USP17L11C9JVI0 530 aa10.02□□□□□ -0.81
XRCC4-206ENST00000542685 USP17L21D6R901 530 aa10.02□□□□□ -0.81
XRCC4-206ENST00000542685 USP17L18D6R9N7 530 aa10.02□□□□□ -0.81
XRCC4-206ENST00000542685 USP17L22D6RA61 530 aa10.02□□□□□ -0.81
XRCC4-206ENST00000542685 USP17L17D6RBQ6 530 aa10.02□□□□□ -0.81
XRCC4-206ENST00000542685 USP17L19D6RCP7 530 aa10.02□□□□□ -0.81
XRCC4-206ENST00000542685 USP17L20D6RJB6 530 aa10.02□□□□□ -0.81
XRCC4-206ENST00000542685 SNRPNP63162 240 aaKnown RBP10.02□□□□□ -0.81
XRCC4-206ENST00000542685 USP17L24Q0WX57 530 aa10.02□□□□□ -0.81
XRCC4-206ENST00000542685 EFSO43281 561 aa10.01□□□□□ -0.81
XRCC4-206ENST00000542685 HIRAP54198 1017 aaPredicted RBP10.01□□□□□ -0.81
XRCC4-206ENST00000542685 PCBP4P57723 403 aaKnown RBP10.01□□□□□ -0.81
XRCC4-206ENST00000542685 C1orf53Q5VUE5 145 aa10.01□□□□□ -0.81
XRCC4-206ENST00000542685 GPC6Q9Y625 555 aaPredicted RBP10.01□□□□□ -0.81
XRCC4-206ENST00000542685 FAM196BA6NMK8 535 aa10□□□□□ -0.81
XRCC4-206ENST00000542685 EPXP11678 715 aa10□□□□□ -0.81
XRCC4-206ENST00000542685 ADH6P28332 368 aa10□□□□□ -0.81
XRCC4-206ENST00000542685 CDCA8Q53HL2 280 aa10□□□□□ -0.81
XRCC4-206ENST00000542685 CFAP70Q5T0N1 1121 aa10□□□□□ -0.81
XRCC4-206ENST00000542685 POTEAQ6S8J7 498 aa10□□□□□ -0.81
XRCC4-206ENST00000542685 ANKMY2Q8IV38 441 aa10□□□□□ -0.81
XRCC4-206ENST00000542685 NGLY1Q96IV0 654 aa10□□□□□ -0.81
XRCC4-206ENST00000542685 HSH2DQ96JZ2 352 aa10□□□□□ -0.81
XRCC4-206ENST00000542685 KLF15Q9UIH9 416 aa10□□□□□ -0.81
XRCC4-206ENST00000542685 RFX1P22670 979 aa9.99□□□□□ -0.81
XRCC4-206ENST00000542685 LAMC2Q13753 1193 aa9.99□□□□□ -0.81
XRCC4-206ENST00000542685 ALDH16A1Q8IZ83 802 aa9.99□□□□□ -0.81
XRCC4-206ENST00000542685 GAS2L2Q8NHY3 880 aa9.99□□□□□ -0.81
XRCC4-206ENST00000542685 C2orf49Q9BVC5 232 aaPredicted RBP9.99□□□□□ -0.81
XRCC4-206ENST00000542685 GRIN2CQ14957 1233 aa9.98□□□□□ -0.81
XRCC4-206ENST00000542685 ZNF468Q5VIY5 522 aaPredicted RBP9.98□□□□□ -0.81
XRCC4-206ENST00000542685 ZNF280CQ8ND82 737 aa9.98□□□□□ -0.81
XRCC4-206ENST00000542685 BTBD6Q96KE9 485 aa9.98□□□□□ -0.81
XRCC4-206ENST00000542685 ANKIB1Q9P2G1 1089 aa9.98□□□□□ -0.81
XRCC4-206ENST00000542685 SFSWAPQ12872 951 aaKnown RBP9.97□□□□□ -0.81
XRCC4-206ENST00000542685 FCHSD1Q86WN1 690 aa9.97□□□□□ -0.81
XRCC4-206ENST00000542685 SUSD3Q96L08 255 aa9.97□□□□□ -0.81
XRCC4-206ENST00000542685 CEP63Q96MT8 703 aa9.97□□□□□ -0.81
XRCC4-206ENST00000542685 MKL2Q9ULH7 1088 aa9.97□□□□□ -0.81
XRCC4-206ENST00000542685 GPAT2Q6NUI2 795 aa9.96□□□□□ -0.82
XRCC4-206ENST00000542685 STAG2Q8N3U4 1231 aa9.96□□□□□ -0.82
XRCC4-206ENST00000542685 AVENQ9NQS1 362 aaPredicted RBP9.96□□□□□ -0.82
XRCC4-206ENST00000542685 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
XRCC4-206ENST00000542685 ARXQ96QS3 562 aa9.95□□□□□ -0.82
XRCC4-206ENST00000542685 BRD7Q9NPI1 651 aa9.95□□□□□ -0.82
XRCC4-206ENST00000542685 SYT9Q86SS6 491 aa9.94□□□□□ -0.82
XRCC4-206ENST00000542685 HOXB4P17483 251 aaPredicted RBP9.93□□□□□ -0.82
XRCC4-206ENST00000542685 CHSY3Q70JA7 882 aa9.93□□□□□ -0.82
XRCC4-206ENST00000542685 FAM200AQ8TCP9 573 aa9.93□□□□□ -0.82
XRCC4-206ENST00000542685 SLC30A3Q99726 388 aa9.93□□□□□ -0.82
XRCC4-206ENST00000542685 IGFBP4P22692 258 aa9.92□□□□□ -0.82
XRCC4-206ENST00000542685 TYRO3Q06418 890 aa9.92□□□□□ -0.82
XRCC4-206ENST00000542685 RAB44Q7Z6P3 723 aaPredicted RBP9.92□□□□□ -0.82
XRCC4-206ENST00000542685 ZMYND15Q9H091 742 aa9.92□□□□□ -0.82
XRCC4-206ENST00000542685 SPEM2Q0P670 501 aa9.91□□□□□ -0.82
XRCC4-206ENST00000542685 LINC00114Q6XXX2 140 aa9.91□□□□□ -0.82
XRCC4-206ENST00000542685 KCNH4Q9UQ05 1017 aa9.91□□□□□ -0.82
XRCC4-206ENST00000542685 DGKGP49619 791 aa9.9□□□□□ -0.82
XRCC4-206ENST00000542685 RTN1Q16799 776 aa9.9□□□□□ -0.82
XRCC4-206ENST00000542685 BTLAQ7Z6A9 289 aa9.9□□□□□ -0.82
XRCC4-206ENST00000542685 HIF1AQ16665 826 aa9.89□□□□□ -0.83
XRCC4-206ENST00000542685 PLA2G4EQ3MJ16 856 aa9.89□□□□□ -0.83
XRCC4-206ENST00000542685 SUV39H2Q9H5I1 410 aa9.89□□□□□ -0.83
XRCC4-206ENST00000542685 NOVA2Q9UNW9 492 aaKnown RBP9.89□□□□□ -0.83
XRCC4-206ENST00000542685 ELOA3CA0A087WX78 387 aaPredicted RBP9.88□□□□□ -0.83
XRCC4-206ENST00000542685 ELOA3DA6NLF2 546 aaPredicted RBP9.88□□□□□ -0.83
XRCC4-206ENST00000542685 GNB5O14775 395 aa9.88□□□□□ -0.83
XRCC4-206ENST00000542685 SIN3BO75182 1162 aa9.88□□□□□ -0.83
XRCC4-206ENST00000542685 ALAS2P22557 587 aa9.88□□□□□ -0.83
XRCC4-206ENST00000542685 COL8A1P27658 744 aa9.88□□□□□ -0.83
XRCC4-206ENST00000542685 WEE1P30291 646 aa9.88□□□□□ -0.83
XRCC4-206ENST00000542685 KCNQ4P56696 695 aa9.88□□□□□ -0.83
XRCC4-206ENST00000542685 NEUROD1Q13562 356 aa9.88□□□□□ -0.83
XRCC4-206ENST00000542685 ELOA3BQ3SY89 546 aa9.88□□□□□ -0.83
XRCC4-206ENST00000542685 ELOA3Q8NG57 546 aa9.88□□□□□ -0.83
XRCC4-206ENST00000542685 VTI1AQ96AJ9 217 aa9.88□□□□□ -0.83
XRCC4-206ENST00000542685 PIK3R2O00459 728 aa9.87□□□□□ -0.83
XRCC4-206ENST00000542685 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms