RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 ELOA3BQ3SY89 546 aa8.5□□□□□ -1.05
MDM2-228ENST00000542502 TBCELQ5QJ74 424 aa8.5□□□□□ -1.05
MDM2-228ENST00000542502 LRRC69Q6ZNQ3 347 aa8.5□□□□□ -1.05
MDM2-228ENST00000542502 ELOA3Q8NG57 546 aa8.5□□□□□ -1.05
MDM2-228ENST00000542502 NACADO15069 1562 aa8.49□□□□□ -1.05
MDM2-228ENST00000542502 SYT9Q86SS6 491 aa8.49□□□□□ -1.05
MDM2-228ENST00000542502 PLEKHM2Q8IWE5 1019 aa8.49□□□□□ -1.05
MDM2-228ENST00000542502 TRIM11Q96F44 468 aa8.49□□□□□ -1.05
MDM2-228ENST00000542502 MDFIQ99750 246 aa8.49□□□□□ -1.05
MDM2-228ENST00000542502 NEUROD4Q9HD90 331 aa8.49□□□□□ -1.05
MDM2-228ENST00000542502 DCAF1Q9Y4B6 1507 aa8.49□□□□□ -1.05
MDM2-228ENST00000542502 ZBTB7BO15156 539 aaPredicted RBP8.48□□□□□ -1.05
MDM2-228ENST00000542502 ALAS2P22557 587 aa8.48□□□□□ -1.05
MDM2-228ENST00000542502 ATP1A2P50993 1020 aa8.48□□□□□ -1.05
MDM2-228ENST00000542502 XP32Q5T750 250 aa8.48□□□□□ -1.05
MDM2-228ENST00000542502 TPCN2Q8NHX9 752 aa8.48□□□□□ -1.05
MDM2-228ENST00000542502 ADAMTS19Q8TE59 1207 aa8.48□□□□□ -1.05
MDM2-228ENST00000542502 PLVAPQ9BX97 442 aa8.48□□□□□ -1.05
MDM2-228ENST00000542502 ZCCHC6Q5VYS8 1495 aaKnown RBP8.47□□□□□ -1.05
MDM2-228ENST00000542502 POM121CA8CG34 1229 aa8.47□□□□□ -1.05
MDM2-228ENST00000542502 SIN3BO75182 1162 aa8.47□□□□□ -1.05
MDM2-228ENST00000542502 SH3PXD2AQ5TCZ1 1133 aa8.47□□□□□ -1.05
MDM2-228ENST00000542502 CCDC102BQ68D86 513 aa8.47□□□□□ -1.05
MDM2-228ENST00000542502 KIAA1024Q9UPX6 916 aa8.47□□□□□ -1.05
MDM2-228ENST00000542502 RB1CC1Q8TDY2 1594 aa8.47□□□□□ -1.05
MDM2-228ENST00000542502 USP17L3A6NCW0 530 aa8.46□□□□□ -1.06
MDM2-228ENST00000542502 USP17L4A6NCW7 530 aa8.46□□□□□ -1.06
MDM2-228ENST00000542502 ADARB2-AS1A8MUL3 147 aa8.46□□□□□ -1.06
MDM2-228ENST00000542502 SPATA31C1P0DKV0 1188 aa8.46□□□□□ -1.06
MDM2-228ENST00000542502 PSMA6P60900 246 aaKnown RBP8.46□□□□□ -1.06
MDM2-228ENST00000542502 CLDN10P78369 228 aa8.46□□□□□ -1.06
MDM2-228ENST00000542502 FLIIQ13045 1269 aa8.46□□□□□ -1.06
MDM2-228ENST00000542502 USP17L2Q6R6M4 530 aa8.46□□□□□ -1.06
MDM2-228ENST00000542502 USP17L1Q7RTZ2 530 aa8.46□□□□□ -1.06
MDM2-228ENST00000542502 RHPN1Q8TCX5 695 aa8.46□□□□□ -1.06
MDM2-228ENST00000542502 UBTFP17480 764 aaKnown RBP8.45□□□□□ -1.06
MDM2-228ENST00000542502 HIRAP54198 1017 aaPredicted RBP8.45□□□□□ -1.06
MDM2-228ENST00000542502 SFSWAPQ12872 951 aaKnown RBP8.45□□□□□ -1.06
MDM2-228ENST00000542502 C1orf53Q5VUE5 145 aa8.45□□□□□ -1.06
MDM2-228ENST00000542502 POTEAQ6S8J7 498 aa8.45□□□□□ -1.06
MDM2-228ENST00000542502 UCN2Q96RP3 112 aa8.45□□□□□ -1.06
MDM2-228ENST00000542502 TSPAN10Q9H1Z9 355 aaPredicted RBP8.45□□□□□ -1.06
MDM2-228ENST00000542502 M0R2N6 131 aa8.44□□□□□ -1.06
MDM2-228ENST00000542502 ATP9BO43861 1147 aa8.44□□□□□ -1.06
MDM2-228ENST00000542502 HDGFL1Q5TGJ6 251 aa8.44□□□□□ -1.06
MDM2-228ENST00000542502 LARGE2Q8N3Y3 721 aa8.44□□□□□ -1.06
MDM2-228ENST00000542502 TNFRSF25Q93038 417 aa8.44□□□□□ -1.06
MDM2-228ENST00000542502 SLC30A3Q99726 388 aa8.44□□□□□ -1.06
MDM2-228ENST00000542502 CHMP3Q9Y3E7 222 aa8.44□□□□□ -1.06
MDM2-228ENST00000542502 PALM3A6NDB9 673 aaPredicted RBP8.43□□□□□ -1.06
MDM2-228ENST00000542502 SPDYE3A6NKU9 549 aa8.43□□□□□ -1.06
MDM2-228ENST00000542502 OGFOD1Q8N543 542 aa8.43□□□□□ -1.06
MDM2-228ENST00000542502 ANKIB1Q9P2G1 1089 aa8.43□□□□□ -1.06
MDM2-228ENST00000542502 SPEM2Q0P670 501 aa8.42□□□□□ -1.06
MDM2-228ENST00000542502 NEUROD1Q13562 356 aa8.42□□□□□ -1.06
MDM2-228ENST00000542502 BRD7Q9NPI1 651 aa8.42□□□□□ -1.06
MDM2-228ENST00000542502 MKRN1Q9UHC7 482 aaKnown RBP8.42□□□□□ -1.06
MDM2-228ENST00000542502 HCN4Q9Y3Q4 1203 aa8.42□□□□□ -1.06
MDM2-228ENST00000542502 M0R082 166 aa8.41□□□□□ -1.06
MDM2-228ENST00000542502 GATA4P43694 442 aa8.41□□□□□ -1.06
MDM2-228ENST00000542502 KCNQ4P56696 695 aa8.41□□□□□ -1.06
MDM2-228ENST00000542502 SIX5Q8N196 739 aa8.41□□□□□ -1.06
MDM2-228ENST00000542502 ZNF417Q8TAU3 575 aa8.41□□□□□ -1.06
MDM2-228ENST00000542502 CEP63Q96MT8 703 aa8.41□□□□□ -1.06
MDM2-228ENST00000542502 ZNF587Q96SQ5 575 aaPredicted RBP8.41□□□□□ -1.06
MDM2-228ENST00000542502 PHACTR1Q9C0D0 580 aa8.41□□□□□ -1.06
MDM2-228ENST00000542502 PRDM6Q9NQX0 595 aa8.41□□□□□ -1.06
MDM2-228ENST00000542502 SFI1A8K8P3 1242 aa8.4□□□□□ -1.06
MDM2-228ENST00000542502 COL9A3Q14050 684 aaPredicted RBP8.4□□□□□ -1.06
MDM2-228ENST00000542502 DOC2BQ14184 412 aa8.4□□□□□ -1.06
MDM2-228ENST00000542502 PRRT3Q5FWE3 981 aa8.4□□□□□ -1.06
MDM2-228ENST00000542502 Q8N3U1 123 aa8.4□□□□□ -1.06
MDM2-228ENST00000542502 TSEN2Q8NCE0 465 aaKnown RBP8.4□□□□□ -1.06
MDM2-228ENST00000542502 HSH2DQ96JZ2 352 aa8.4□□□□□ -1.06
MDM2-228ENST00000542502 STARD13Q9Y3M8 1113 aa8.4□□□□□ -1.06
MDM2-228ENST00000542502 ADH7P40394 386 aa8.39□□□□□ -1.07
MDM2-228ENST00000542502 TYRO3Q06418 890 aa8.39□□□□□ -1.07
MDM2-228ENST00000542502 MICALL1Q8N3F8 863 aa8.39□□□□□ -1.07
MDM2-228ENST00000542502 ZNF280CQ8ND82 737 aa8.39□□□□□ -1.07
MDM2-228ENST00000542502 SUSD3Q96L08 255 aa8.39□□□□□ -1.07
MDM2-228ENST00000542502 KCNH4Q9UQ05 1017 aa8.39□□□□□ -1.07
MDM2-228ENST00000542502 PPP1R12BO60237 982 aaPredicted RBP8.38□□□□□ -1.07
MDM2-228ENST00000542502 DKK1O94907 266 aa8.38□□□□□ -1.07
MDM2-228ENST00000542502 ALBP02768 609 aa8.38□□□□□ -1.07
MDM2-228ENST00000542502 ITGB7P26010 798 aa8.38□□□□□ -1.07
MDM2-228ENST00000542502 RAB44Q7Z6P3 723 aaPredicted RBP8.38□□□□□ -1.07
MDM2-228ENST00000542502 ZNF594Q96JF6 807 aaPredicted RBP8.38□□□□□ -1.07
MDM2-228ENST00000542502 SEMA6BQ9H3T3 888 aa8.38□□□□□ -1.07
MDM2-228ENST00000542502 RBM19Q9Y4C8 960 aaKnown RBP8.38□□□□□ -1.07
MDM2-228ENST00000542502 C21orf2O43822 256 aa8.37□□□□□ -1.07
MDM2-228ENST00000542502 APBA3O96018 575 aa8.37□□□□□ -1.07
MDM2-228ENST00000542502 STAG2Q8N3U4 1231 aa8.37□□□□□ -1.07
MDM2-228ENST00000542502 C8orf86Q6ZUL3 223 aa8.36□□□□□ -1.07
MDM2-228ENST00000542502 ALDH16A1Q8IZ83 802 aa8.36□□□□□ -1.07
MDM2-228ENST00000542502 C2orf49Q9BVC5 232 aaPredicted RBP8.36□□□□□ -1.07
MDM2-228ENST00000542502 ATAD2Q6PL18 1390 aa8.35□□□□□ -1.07
MDM2-228ENST00000542502 NID1P14543 1247 aa8.35□□□□□ -1.07
MDM2-228ENST00000542502 TRIM28Q13263 835 aaKnown RBP8.35□□□□□ -1.07
MDM2-228ENST00000542502 HIF1AQ16665 826 aa8.35□□□□□ -1.07
MDM2-228ENST00000542502 C20orf204Q6ZNR8 217 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms