RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 MDFIQ99750 246 aa10.83□□□□□ -0.68
SRGAP1-204ENST00000542381 ZNF232Q9UNY5 417 aa10.83□□□□□ -0.68
SRGAP1-204ENST00000542381 USP17L5A8MUK1 530 aa10.82□□□□□ -0.68
SRGAP1-204ENST00000542381 SFSWAPQ12872 951 aaKnown RBP10.82□□□□□ -0.68
SRGAP1-204ENST00000542381 SLC30A3Q99726 388 aa10.81□□□□□ -0.68
SRGAP1-204ENST00000542381 ZBTB7BO15156 539 aaPredicted RBP10.8□□□□□ -0.68
SRGAP1-204ENST00000542381 ALAS2P22557 587 aa10.8□□□□□ -0.68
SRGAP1-204ENST00000542381 NEUROD4Q9HD90 331 aa10.8□□□□□ -0.68
SRGAP1-204ENST00000542381 KIAA1024Q9UPX6 916 aa10.8□□□□□ -0.68
SRGAP1-204ENST00000542381 SERTM1A2A2V5 107 aa10.79□□□□□ -0.68
SRGAP1-204ENST00000542381 SPATA31C1P0DKV0 1188 aa10.79□□□□□ -0.68
SRGAP1-204ENST00000542381 SEMA6BQ9H3T3 888 aa10.79□□□□□ -0.68
SRGAP1-204ENST00000542381 POM121CA8CG34 1229 aa10.78□□□□□ -0.68
SRGAP1-204ENST00000542381 SIN3BO75182 1162 aa10.78□□□□□ -0.68
SRGAP1-204ENST00000542381 TPCN2Q8NHX9 752 aa10.78□□□□□ -0.68
SRGAP1-204ENST00000542381 ADAMTS19Q8TE59 1207 aa10.78□□□□□ -0.68
SRGAP1-204ENST00000542381 GATA4P43694 442 aa10.77□□□□□ -0.69
SRGAP1-204ENST00000542381 RHPN1Q8TCX5 695 aa10.77□□□□□ -0.69
SRGAP1-204ENST00000542381 STARD13Q9Y3M8 1113 aa10.77□□□□□ -0.69
SRGAP1-204ENST00000542381 ADARB2-AS1A8MUL3 147 aa10.76□□□□□ -0.69
SRGAP1-204ENST00000542381 CLDN10P78369 228 aa10.76□□□□□ -0.69
SRGAP1-204ENST00000542381 COL9A3Q14050 684 aaPredicted RBP10.76□□□□□ -0.69
SRGAP1-204ENST00000542381 C8orf86Q6ZUL3 223 aa10.76□□□□□ -0.69
SRGAP1-204ENST00000542381 RAB44Q7Z6P3 723 aaPredicted RBP10.76□□□□□ -0.69
SRGAP1-204ENST00000542381 TSPAN10Q9H1Z9 355 aaPredicted RBP10.76□□□□□ -0.69
SRGAP1-204ENST00000542381 HCN4Q9Y3Q4 1203 aa10.76□□□□□ -0.69
SRGAP1-204ENST00000542381 GPC6Q9Y625 555 aaPredicted RBP10.76□□□□□ -0.69
SRGAP1-204ENST00000542381 FAM229AH3BQW9 127 aa10.75□□□□□ -0.69
SRGAP1-204ENST00000542381 M0R082 166 aa10.75□□□□□ -0.69
SRGAP1-204ENST00000542381 CCDC102BQ68D86 513 aa10.75□□□□□ -0.69
SRGAP1-204ENST00000542381 TRIM50Q86XT4 487 aa10.75□□□□□ -0.69
SRGAP1-204ENST00000542381 WWC1Q8IX03 1113 aa10.75□□□□□ -0.69
SRGAP1-204ENST00000542381 ZNF417Q8TAU3 575 aa10.75□□□□□ -0.69
SRGAP1-204ENST00000542381 HSH2DQ96JZ2 352 aa10.75□□□□□ -0.69
SRGAP1-204ENST00000542381 ZNF587Q96SQ5 575 aaPredicted RBP10.75□□□□□ -0.69
SRGAP1-204ENST00000542381 SPEM2Q0P670 501 aa10.74□□□□□ -0.69
SRGAP1-204ENST00000542381 TNFRSF25Q93038 417 aa10.74□□□□□ -0.69
SRGAP1-204ENST00000542381 USP17L3A6NCW0 530 aa10.73□□□□□ -0.69
SRGAP1-204ENST00000542381 USP17L4A6NCW7 530 aa10.73□□□□□ -0.69
SRGAP1-204ENST00000542381 ALBP02768 609 aa10.73□□□□□ -0.69
SRGAP1-204ENST00000542381 USP17L2Q6R6M4 530 aa10.73□□□□□ -0.69
SRGAP1-204ENST00000542381 USP17L1Q7RTZ2 530 aa10.73□□□□□ -0.69
SRGAP1-204ENST00000542381 PLEKHM2Q8IWE5 1019 aa10.73□□□□□ -0.69
SRGAP1-204ENST00000542381 UCN2Q96RP3 112 aa10.73□□□□□ -0.69
SRGAP1-204ENST00000542381 PSMA6P60900 246 aaKnown RBP10.72□□□□□ -0.69
SRGAP1-204ENST00000542381 PRRT3Q5FWE3 981 aa10.72□□□□□ -0.69
SRGAP1-204ENST00000542381 MICALL1Q8N3F8 863 aa10.72□□□□□ -0.69
SRGAP1-204ENST00000542381 ZNF280CQ8ND82 737 aa10.72□□□□□ -0.69
SRGAP1-204ENST00000542381 CEP63Q96MT8 703 aa10.72□□□□□ -0.69
SRGAP1-204ENST00000542381 PHACTR1Q9C0D0 580 aa10.72□□□□□ -0.69
SRGAP1-204ENST00000542381 BRD7Q9NPI1 651 aa10.72□□□□□ -0.69
SRGAP1-204ENST00000542381 SPDYE3A6NKU9 549 aa10.71□□□□□ -0.69
SRGAP1-204ENST00000542381 SFI1A8K8P3 1242 aa10.71□□□□□ -0.69
SRGAP1-204ENST00000542381 RAD21O60216 631 aa10.71□□□□□ -0.69
SRGAP1-204ENST00000542381 ADH7P40394 386 aa10.71□□□□□ -0.69
SRGAP1-204ENST00000542381 ATP1A2P50993 1020 aa10.71□□□□□ -0.69
SRGAP1-204ENST00000542381 HDGFL1Q5TGJ6 251 aa10.71□□□□□ -0.69
SRGAP1-204ENST00000542381 C1orf53Q5VUE5 145 aa10.71□□□□□ -0.69
SRGAP1-204ENST00000542381 HIRAP54198 1017 aaPredicted RBP10.7□□□□□ -0.7
SRGAP1-204ENST00000542381 RSPO4Q2I0M5 234 aaPredicted RBP10.7□□□□□ -0.7
SRGAP1-204ENST00000542381 POTEAQ6S8J7 498 aa10.7□□□□□ -0.7
SRGAP1-204ENST00000542381 OGFOD1Q8N543 542 aa10.7□□□□□ -0.7
SRGAP1-204ENST00000542381 PRDM6Q9NQX0 595 aa10.7□□□□□ -0.7
SRGAP1-204ENST00000542381 APBA3O96018 575 aa10.69□□□□□ -0.7
SRGAP1-204ENST00000542381 TSEN2Q8NCE0 465 aaKnown RBP10.69□□□□□ -0.7
SRGAP1-204ENST00000542381 SUSD3Q96L08 255 aa10.69□□□□□ -0.7
SRGAP1-204ENST00000542381 TPSG1Q9NRR2 321 aa10.69□□□□□ -0.7
SRGAP1-204ENST00000542381 ATP9BO43861 1147 aa10.68□□□□□ -0.7
SRGAP1-204ENST00000542381 NID1P14543 1247 aa10.68□□□□□ -0.7
SRGAP1-204ENST00000542381 TYRO3Q06418 890 aa10.68□□□□□ -0.7
SRGAP1-204ENST00000542381 ANKIB1Q9P2G1 1089 aa10.68□□□□□ -0.7
SRGAP1-204ENST00000542381 MKRN1Q9UHC7 482 aaKnown RBP10.68□□□□□ -0.7
SRGAP1-204ENST00000542381 KCNH4Q9UQ05 1017 aa10.68□□□□□ -0.7
SRGAP1-204ENST00000542381 CHMP3Q9Y3E7 222 aa10.68□□□□□ -0.7
SRGAP1-204ENST00000542381 C21orf2O43822 256 aa10.67□□□□□ -0.7
SRGAP1-204ENST00000542381 PRKCSHP14314 528 aaPredicted RBP10.67□□□□□ -0.7
SRGAP1-204ENST00000542381 KCNQ4P56696 695 aa10.67□□□□□ -0.7
SRGAP1-204ENST00000542381 TRIM28Q13263 835 aaKnown RBP10.67□□□□□ -0.7
SRGAP1-204ENST00000542381 NEUROD1Q13562 356 aa10.67□□□□□ -0.7
SRGAP1-204ENST00000542381 GRIK4Q16099 956 aa10.67□□□□□ -0.7
SRGAP1-204ENST00000542381 NKAPLQ5M9Q1 402 aa10.67□□□□□ -0.7
SRGAP1-204ENST00000542381 C20orf204Q6ZNR8 217 aa10.67□□□□□ -0.7
SRGAP1-204ENST00000542381 LARGE2Q8N3Y3 721 aa10.67□□□□□ -0.7
SRGAP1-204ENST00000542381 PALM3A6NDB9 673 aaPredicted RBP10.66□□□□□ -0.7
SRGAP1-204ENST00000542381 M0R2N6 131 aa10.66□□□□□ -0.7
SRGAP1-204ENST00000542381 PPP1R12BO60237 982 aaPredicted RBP10.66□□□□□ -0.7
SRGAP1-204ENST00000542381 DKK1O94907 266 aa10.66□□□□□ -0.7
SRGAP1-204ENST00000542381 UBTFP17480 764 aaKnown RBP10.66□□□□□ -0.7
SRGAP1-204ENST00000542381 ZMYM1Q5SVZ6 1142 aa10.66□□□□□ -0.7
SRGAP1-204ENST00000542381 ZNF594Q96JF6 807 aaPredicted RBP10.66□□□□□ -0.7
SRGAP1-204ENST00000542381 BHMTQ93088 406 aa10.65□□□□□ -0.7
SRGAP1-204ENST00000542381 ALDH16A1Q8IZ83 802 aa10.64□□□□□ -0.71
SRGAP1-204ENST00000542381 SIX5Q8N196 739 aa10.64□□□□□ -0.71
SRGAP1-204ENST00000542381 FOXD4L6Q3SYB3 417 aaPredicted RBP10.63□□□□□ -0.71
SRGAP1-204ENST00000542381 FOXD4L3Q6VB84 417 aaPredicted RBP10.63□□□□□ -0.71
SRGAP1-204ENST00000542381 KRTAP4-8Q9BYQ9 185 aa10.63□□□□□ -0.71
SRGAP1-204ENST00000542381 ATAD2Q6PL18 1390 aa10.63□□□□□ -0.71
SRGAP1-204ENST00000542381 TBC1D8BQ0IIM8 1120 aa10.62□□□□□ -0.71
SRGAP1-204ENST00000542381 IGFLR1Q9H665 355 aa10.62□□□□□ -0.71
SRGAP1-204ENST00000542381 DYRK3O43781 588 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms