RNA–Protein interactions for RNA: ENST00000542277.5

PTPN6-216, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 664 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-216ENST00000542277 MIS18AQ9NYP9 233 aa23.92■■□□□ 1.42
PTPN6-216ENST00000542277 UBR2Q8IWV8 1755 aa23.92■■□□□ 1.42
PTPN6-216ENST00000542277 ST5P78524 1137 aa23.91■■□□□ 1.42
PTPN6-216ENST00000542277 MASTLQ96GX5 879 aa23.91■■□□□ 1.42
PTPN6-216ENST00000542277 HTATSF1O43719 755 aaKnown RBP23.9■■□□□ 1.42
PTPN6-216ENST00000542277 TAF7Q15545 349 aaPredicted RBP23.9■■□□□ 1.42
PTPN6-216ENST00000542277 PRPF40BQ6NWY9 871 aaKnown RBP23.9■■□□□ 1.42
PTPN6-216ENST00000542277 NBPF5PQ86XG9 351 aaPredicted RBP23.89■■□□□ 1.41
PTPN6-216ENST00000542277 C7orf43Q8WVR3 580 aa23.89■■□□□ 1.41
PTPN6-216ENST00000542277 TAOK3Q9H2K8 898 aa23.88■■□□□ 1.41
PTPN6-216ENST00000542277 VIRMAQ69YN4 1812 aaKnown RBP23.87■■□□□ 1.41
PTPN6-216ENST00000542277 DDNO94850 711 aaPredicted RBP23.87■■□□□ 1.41
PTPN6-216ENST00000542277 PCNTO95613 3336 aa23.87■■□□□ 1.41
PTPN6-216ENST00000542277 LTBP3Q9NS15 1303 aa23.86■■□□□ 1.41
PTPN6-216ENST00000542277 FAM177BA6PVY3 158 aa23.86■■□□□ 1.41
PTPN6-216ENST00000542277 HLFQ16534 295 aa23.86■■□□□ 1.41
PTPN6-216ENST00000542277 TPTE2Q6XPS3 522 aa23.86■■□□□ 1.41
PTPN6-216ENST00000542277 NIP7Q9Y221 180 aaKnown RBP eCLIP23.86■■□□□ 1.41
PTPN6-216ENST00000542277 KLRG2A4D1S0 409 aaPredicted RBP23.85■■□□□ 1.41
PTPN6-216ENST00000542277 COL13A1Q5TAT6 717 aaPredicted RBP23.85■■□□□ 1.41
PTPN6-216ENST00000542277 ZNF652Q9Y2D9 606 aa23.85■■□□□ 1.41
PTPN6-216ENST00000542277 NPR1P16066 1061 aa23.83■■□□□ 1.41
PTPN6-216ENST00000542277 OLFM4Q6UX06 510 aa23.83■■□□□ 1.41
PTPN6-216ENST00000542277 SOGA3Q5TF21 947 aa23.82■■□□□ 1.4
PTPN6-216ENST00000542277 NGEFQ8N5V2 710 aa23.82■■□□□ 1.4
PTPN6-216ENST00000542277 SIPA1L3O60292 1781 aaPredicted RBP23.82■■□□□ 1.4
PTPN6-216ENST00000542277 ANKRD31Q8N7Z5 1873 aa23.81■■□□□ 1.4
PTPN6-216ENST00000542277 POTEIP0CG38 1075 aa23.81■■□□□ 1.4
PTPN6-216ENST00000542277 POTEJP0CG39 1038 aa23.81■■□□□ 1.4
PTPN6-216ENST00000542277 RGL2O15211 777 aa23.8■■□□□ 1.4
PTPN6-216ENST00000542277 DLEC1Q9Y238 1755 aa23.8■■□□□ 1.4
PTPN6-216ENST00000542277 WDR90Q96KV7 1748 aa23.79■■□□□ 1.4
PTPN6-216ENST00000542277 CCDC93Q567U6 631 aa23.79■■□□□ 1.4
PTPN6-216ENST00000542277 CHADLQ6NUI6 762 aa23.79■■□□□ 1.4
PTPN6-216ENST00000542277 PLEKHF1Q96S99 279 aa23.79■■□□□ 1.4
PTPN6-216ENST00000542277 THUMPD2Q9BTF0 503 aaKnown RBP23.78■■□□□ 1.4
PTPN6-216ENST00000542277 ZNF277Q9NRM2 450 aaPredicted RBP23.78■■□□□ 1.4
PTPN6-216ENST00000542277 RRP7AQ9Y3A4 280 aaKnown RBP23.78■■□□□ 1.4
PTPN6-216ENST00000542277 SLX4Q8IY92 1834 aa23.77■■□□□ 1.4
PTPN6-216ENST00000542277 TNRC6CQ9HCJ0 1690 aaKnown RBP23.77■■□□□ 1.4
PTPN6-216ENST00000542277 GTF2E1P29083 439 aaPredicted RBP23.77■■□□□ 1.4
PTPN6-216ENST00000542277 EIF4A1P60842 406 aaKnown RBP23.77■■□□□ 1.4
PTPN6-216ENST00000542277 FKBP4Q02790 459 aaKnown RBP eCLIP23.76■■□□□ 1.39
PTPN6-216ENST00000542277 TTLL7Q6ZT98 887 aa23.76■■□□□ 1.39
PTPN6-216ENST00000542277 PNISRQ8TF01 805 aaKnown RBP23.76■■□□□ 1.39
PTPN6-216ENST00000542277 SCN7AQ01118 1682 aa23.76■■□□□ 1.39
PTPN6-216ENST00000542277 ALDH1B1P30837 517 aa23.75■■□□□ 1.39
PTPN6-216ENST00000542277 ERVV-1B6SEH8 477 aa23.74■■□□□ 1.39
PTPN6-216ENST00000542277 NEFMP07197 916 aa23.74■■□□□ 1.39
PTPN6-216ENST00000542277 NFE2L2Q16236 605 aa23.74■■□□□ 1.39
PTPN6-216ENST00000542277 NUTM1Q86Y26 1132 aa23.74■■□□□ 1.39
PTPN6-216ENST00000542277 RTKN2Q8IZC4 609 aa23.74■■□□□ 1.39
PTPN6-216ENST00000542277 SYNE4Q8N205 404 aa23.74■■□□□ 1.39
PTPN6-216ENST00000542277 TAF1DQ9H5J8 278 aaPredicted RBP23.74■■□□□ 1.39
PTPN6-216ENST00000542277 CCDC88AQ3V6T2 1871 aa23.74■■□□□ 1.39
PTPN6-216ENST00000542277 MYL6BP14649 208 aa23.73■■□□□ 1.39
PTPN6-216ENST00000542277 L3MBTL3Q96JM7 780 aaPredicted RBP23.73■■□□□ 1.39
PTPN6-216ENST00000542277 COL11A2P13942 1736 aaPredicted RBP23.73■■□□□ 1.39
PTPN6-216ENST00000542277 HSPA1AP0DMV8 641 aaKnown RBP23.72■■□□□ 1.39
PTPN6-216ENST00000542277 HSPA1BP0DMV9 641 aaKnown RBP23.72■■□□□ 1.39
PTPN6-216ENST00000542277 FER1L6Q2WGJ9 1857 aa23.71■■□□□ 1.39
PTPN6-216ENST00000542277 MAP3K15Q6ZN16 1313 aa23.71■■□□□ 1.39
PTPN6-216ENST00000542277 ZNF541Q9H0D2 1346 aa23.7■■□□□ 1.38
PTPN6-216ENST00000542277 IQCA1LA6NCM1 817 aa23.7■■□□□ 1.38
PTPN6-216ENST00000542277 GPTP24298 496 aa23.7■■□□□ 1.38
PTPN6-216ENST00000542277 CRY2Q49AN0 593 aa23.7■■□□□ 1.38
PTPN6-216ENST00000542277 CREBZFQ9NS37 354 aa23.7■■□□□ 1.38
PTPN6-216ENST00000542277 MKRN1Q9UHC7 482 aaKnown RBP23.7■■□□□ 1.38
PTPN6-216ENST00000542277 IARSP41252 1262 aaKnown RBP23.69■■□□□ 1.38
PTPN6-216ENST00000542277 SUSD4Q5VX71 490 aa23.69■■□□□ 1.38
PTPN6-216ENST00000542277 LDHDQ86WU2 507 aa23.69■■□□□ 1.38
PTPN6-216ENST00000542277 NYXQ9GZU5 481 aa23.69■■□□□ 1.38
PTPN6-216ENST00000542277 ZBTB3Q9H5J0 574 aa23.69■■□□□ 1.38
PTPN6-216ENST00000542277 FZD9O00144 591 aa23.68■■□□□ 1.38
PTPN6-216ENST00000542277 ITGBL1O95965 494 aaPredicted RBP23.67■■□□□ 1.38
PTPN6-216ENST00000542277 EAPPQ56P03 285 aaPredicted RBP23.67■■□□□ 1.38
PTPN6-216ENST00000542277 KIF6Q6ZMV9 814 aa23.67■■□□□ 1.38
PTPN6-216ENST00000542277 ZNF34Q8IZ26 560 aa23.67■■□□□ 1.38
PTPN6-216ENST00000542277 TNS4Q8IZW8 715 aa23.67■■□□□ 1.38
PTPN6-216ENST00000542277 ABCC12Q96J65 1359 aa23.66■■□□□ 1.38
PTPN6-216ENST00000542277 PASKQ96RG2 1323 aa23.66■■□□□ 1.38
PTPN6-216ENST00000542277 HOXA10P31260 410 aaPredicted RBP23.66■■□□□ 1.38
PTPN6-216ENST00000542277 PNNQ9H307 717 aaKnown RBP23.66■■□□□ 1.38
PTPN6-216ENST00000542277 HACL1Q9UJ83 578 aa23.66■■□□□ 1.38
PTPN6-216ENST00000542277 TIAM2Q8IVF5 1701 aa23.66■■□□□ 1.38
PTPN6-216ENST00000542277 UBN2Q6ZU65 1347 aa23.65■■□□□ 1.38
PTPN6-216ENST00000542277 EPHX2P34913 555 aa23.65■■□□□ 1.38
PTPN6-216ENST00000542277 SLC51AQ86UW1 340 aa23.65■■□□□ 1.38
PTPN6-216ENST00000542277 PSMD1Q99460 953 aa23.65■■□□□ 1.38
PTPN6-216ENST00000542277 CLEC11AQ9Y240 323 aa23.65■■□□□ 1.38
PTPN6-216ENST00000542277 BCORQ6W2J9 1755 aa23.65■■□□□ 1.38
PTPN6-216ENST00000542277 TCERG1O14776 1098 aaKnown RBP23.64■■□□□ 1.37
PTPN6-216ENST00000542277 CAPN15O75808 1086 aa23.64■■□□□ 1.37
PTPN6-216ENST00000542277 PDIA6Q15084 440 aa23.64■■□□□ 1.37
PTPN6-216ENST00000542277 C3orf67Q6ZVT6 689 aa23.64■■□□□ 1.37
PTPN6-216ENST00000542277 EIF2S2P20042 333 aaKnown RBP23.63■■□□□ 1.37
PTPN6-216ENST00000542277 RIPK4P57078 832 aa23.63■■□□□ 1.37
PTPN6-216ENST00000542277 CC2D2BQ6DHV5 1058 aa23.63■■□□□ 1.37
PTPN6-216ENST00000542277 GIGYF2Q6Y7W6 1299 aaKnown RBP23.63■■□□□ 1.37
PTPN6-216ENST00000542277 LRP10Q7Z4F1 713 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms