RNA–Protein interactions for RNA: ENST00000542191.5

SNCAIP-222, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5 BASIC

Gene SNCAIP, Length 2,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-222ENST00000542191 TBC1D2Q9BYX2 928 aa17.1■□□□□ 0.33
SNCAIP-222ENST00000542191 SYNE4Q8N205 404 aa17.09■□□□□ 0.33
SNCAIP-222ENST00000542191 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
SNCAIP-222ENST00000542191 DDX58O95786 925 aaKnown RBP17.09■□□□□ 0.33
SNCAIP-222ENST00000542191 HSP90AB1P08238 724 aaKnown RBP17.09■□□□□ 0.33
SNCAIP-222ENST00000542191 MX1P20591 662 aa17.08■□□□□ 0.33
SNCAIP-222ENST00000542191 GPTP24298 496 aa17.08■□□□□ 0.33
SNCAIP-222ENST00000542191 LRP10Q7Z4F1 713 aa17.08■□□□□ 0.33
SNCAIP-222ENST00000542191 NHSL1Q5SYE7 1610 aa17.08■□□□□ 0.33
SNCAIP-222ENST00000542191 A0A087WZG4 1122 aa17.08■□□□□ 0.32
SNCAIP-222ENST00000542191 RHPN1Q8TCX5 695 aa17.08■□□□□ 0.32
SNCAIP-222ENST00000542191 CCDC8Q9H0W5 538 aaPredicted RBP17.08■□□□□ 0.32
SNCAIP-222ENST00000542191 IL25Q9H293 177 aa17.08■□□□□ 0.32
SNCAIP-222ENST00000542191 RTN4Q9NQC3 1192 aaKnown RBP17.08■□□□□ 0.32
SNCAIP-222ENST00000542191 EXOC5O00471 708 aa17.07■□□□□ 0.32
SNCAIP-222ENST00000542191 NEXNQ0ZGT2 675 aa17.07■□□□□ 0.32
SNCAIP-222ENST00000542191 FAM98CQ17RN3 349 aaKnown RBP17.07■□□□□ 0.32
SNCAIP-222ENST00000542191 PTF1AQ7RTS3 328 aa17.07■□□□□ 0.32
SNCAIP-222ENST00000542191 LINS1Q8NG48 757 aa17.07■□□□□ 0.32
SNCAIP-222ENST00000542191 SSH3Q8TE77 659 aa17.07■□□□□ 0.32
SNCAIP-222ENST00000542191 KCNQ2O43526 872 aa17.06■□□□□ 0.32
SNCAIP-222ENST00000542191 DTNBO60941 627 aa17.06■□□□□ 0.32
SNCAIP-222ENST00000542191 CDC45O75419 566 aa17.06■□□□□ 0.32
SNCAIP-222ENST00000542191 GCKRQ14397 625 aa17.06■□□□□ 0.32
SNCAIP-222ENST00000542191 SLC4A9Q96Q91 983 aa17.06■□□□□ 0.32
SNCAIP-222ENST00000542191 TLR7Q9NYK1 1049 aaKnown RBP17.06■□□□□ 0.32
SNCAIP-222ENST00000542191 IBTKQ9P2D0 1353 aaPredicted RBP17.06■□□□□ 0.32
SNCAIP-222ENST00000542191 ATG3Q9NT62 314 aa17.06■□□□□ 0.32
SNCAIP-222ENST00000542191 NOL8Q76FK4 1167 aaKnown RBP17.05■□□□□ 0.32
SNCAIP-222ENST00000542191 NGLY1Q96IV0 654 aa17.05■□□□□ 0.32
SNCAIP-222ENST00000542191 METTL22Q9BUU2 404 aaPredicted RBP17.05■□□□□ 0.32
SNCAIP-222ENST00000542191 ZNF594Q96JF6 807 aaPredicted RBP17.04■□□□□ 0.32
SNCAIP-222ENST00000542191 TBC1D2BQ9UPU7 963 aa17.04■□□□□ 0.32
SNCAIP-222ENST00000542191 PKD1L3Q7Z443 1732 aa17.04■□□□□ 0.32
SNCAIP-222ENST00000542191 CHGBP05060 677 aa17.03■□□□□ 0.32
SNCAIP-222ENST00000542191 EDC3Q96F86 508 aaKnown RBP17.03■□□□□ 0.32
SNCAIP-222ENST00000542191 ERVV-2B6SEH9 535 aa17.03■□□□□ 0.32
SNCAIP-222ENST00000542191 LTBP4Q8N2S1 1624 aa17.02■□□□□ 0.32
SNCAIP-222ENST00000542191 TOM1O60784 492 aa17.02■□□□□ 0.32
SNCAIP-222ENST00000542191 POLA2Q14181 598 aa17.02■□□□□ 0.32
SNCAIP-222ENST00000542191 DDB1Q16531 1140 aa17.02■□□□□ 0.32
SNCAIP-222ENST00000542191 AACSQ86V21 672 aa17.02■□□□□ 0.32
SNCAIP-222ENST00000542191 FAM89AQ96GI7 184 aa17.02■□□□□ 0.31
SNCAIP-222ENST00000542191 SHANK3Q9BYB0 1731 aa17.01■□□□□ 0.31
SNCAIP-222ENST00000542191 TOGARAM1Q9Y4F4 1720 aa17.01■□□□□ 0.31
SNCAIP-222ENST00000542191 HLFQ16534 295 aa17.01■□□□□ 0.31
SNCAIP-222ENST00000542191 IL27Q8NEV9 243 aa17.01■□□□□ 0.31
SNCAIP-222ENST00000542191 KIF2CQ99661 725 aa17.01■□□□□ 0.31
SNCAIP-222ENST00000542191 ZBTB1Q9Y2K1 713 aa17.01■□□□□ 0.31
SNCAIP-222ENST00000542191 FRAT2O75474 233 aaPredicted RBP17.01■□□□□ 0.31
SNCAIP-222ENST00000542191 SASH1O94885 1247 aa17.01■□□□□ 0.31
SNCAIP-222ENST00000542191 LMBR1LQ6UX01 489 aa17.01■□□□□ 0.31
SNCAIP-222ENST00000542191 PHLPP1O60346 1717 aa17■□□□□ 0.31
SNCAIP-222ENST00000542191 PARP4Q9UKK3 1724 aaKnown RBP17■□□□□ 0.31
SNCAIP-222ENST00000542191 MARCH10Q8NA82 808 aaPredicted RBP17■□□□□ 0.31
SNCAIP-222ENST00000542191 ADAMTS7Q9UKP4 1686 aa17■□□□□ 0.31
SNCAIP-222ENST00000542191 ANO2Q9NQ90 1003 aa17■□□□□ 0.31
SNCAIP-222ENST00000542191 COL16A1Q07092 1604 aaPredicted RBP17■□□□□ 0.31
SNCAIP-222ENST00000542191 ALDH1L1O75891 902 aa16.99■□□□□ 0.31
SNCAIP-222ENST00000542191 EAF2Q96CJ1 260 aaPredicted RBP16.99■□□□□ 0.31
SNCAIP-222ENST00000542191 NKX1-1Q15270 411 aaPredicted RBP16.99■□□□□ 0.31
SNCAIP-222ENST00000542191 LARP6Q9BRS8 491 aaKnown RBP16.98■□□□□ 0.31
SNCAIP-222ENST00000542191 BOLA2Q9H3K6 86 aa16.98■□□□□ 0.31
SNCAIP-222ENST00000542191 SALL3Q9BXA9 1300 aa16.98■□□□□ 0.31
SNCAIP-222ENST00000542191 PXDNLA1KZ92 1463 aa16.98■□□□□ 0.31
SNCAIP-222ENST00000542191 CWC27Q6UX04 472 aaKnown RBP16.98■□□□□ 0.31
SNCAIP-222ENST00000542191 KIF1BPQ96EK5 621 aa16.98■□□□□ 0.31
SNCAIP-222ENST00000542191 G3BP1Q13283 466 aaKnown RBP eCLIP16.98■□□□□ 0.31
SNCAIP-222ENST00000542191 PLBD2Q8NHP8 589 aa16.98■□□□□ 0.31
SNCAIP-222ENST00000542191 IFIT2P09913 472 aaKnown RBP16.97■□□□□ 0.31
SNCAIP-222ENST00000542191 BECN1Q14457 450 aa16.97■□□□□ 0.31
SNCAIP-222ENST00000542191 SLFNL1Q499Z3 407 aa16.97■□□□□ 0.31
SNCAIP-222ENST00000542191 KCPQ6ZWJ8 1503 aa16.97■□□□□ 0.31
SNCAIP-222ENST00000542191 NFKBIBQ15653 356 aa16.97■□□□□ 0.31
SNCAIP-222ENST00000542191 PALD1Q9ULE6 856 aa16.97■□□□□ 0.31
SNCAIP-222ENST00000542191 SPATA31A1Q5TZJ5 1347 aa16.96■□□□□ 0.31
SNCAIP-222ENST00000542191 MRC1P22897 1456 aa16.96■□□□□ 0.31
SNCAIP-222ENST00000542191 GLI3P10071 1580 aa16.96■□□□□ 0.31
SNCAIP-222ENST00000542191 TFCP2Q12800 502 aa16.96■□□□□ 0.31
SNCAIP-222ENST00000542191 CLASRPQ8N2M8 674 aaKnown RBP16.96■□□□□ 0.31
SNCAIP-222ENST00000542191 PI4K2BQ8TCG2 481 aa16.96■□□□□ 0.31
SNCAIP-222ENST00000542191 AFDNP55196 1824 aaKnown RBP16.96■□□□□ 0.31
SNCAIP-222ENST00000542191 PUS3Q9BZE2 481 aaKnown RBP16.96■□□□□ 0.3
SNCAIP-222ENST00000542191 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.96■□□□□ 0.3
SNCAIP-222ENST00000542191 USP26Q9BXU7 913 aa16.95■□□□□ 0.3
SNCAIP-222ENST00000542191 CHMP4AQ9BY43 222 aa16.95■□□□□ 0.3
SNCAIP-222ENST00000542191 HSP90AA1P07900 732 aaKnown RBP16.94■□□□□ 0.3
SNCAIP-222ENST00000542191 LRRC24Q50LG9 513 aa16.94■□□□□ 0.3
SNCAIP-222ENST00000542191 ITGB4P16144 1822 aa16.94■□□□□ 0.3
SNCAIP-222ENST00000542191 ATP6V1AP38606 617 aa16.94■□□□□ 0.3
SNCAIP-222ENST00000542191 HSCBQ8IWL3 235 aa16.94■□□□□ 0.3
SNCAIP-222ENST00000542191 NEUROD6Q96NK8 337 aa16.94■□□□□ 0.3
SNCAIP-222ENST00000542191 UPF3BQ9BZI7 483 aaKnown RBP16.94■□□□□ 0.3
SNCAIP-222ENST00000542191 CHMLP26374 656 aa16.93■□□□□ 0.3
SNCAIP-222ENST00000542191 TIMM10P62072 90 aa16.93■□□□□ 0.3
SNCAIP-222ENST00000542191 PTPN12Q05209 780 aaKnown RBP16.93■□□□□ 0.3
SNCAIP-222ENST00000542191 CWC25Q9NXE8 425 aaPredicted RBP16.93■□□□□ 0.3
SNCAIP-222ENST00000542191 AK9Q5TCS8 1911 aa16.93■□□□□ 0.3
SNCAIP-222ENST00000542191 RBM25P49756 843 aaKnown RBP16.92■□□□□ 0.3
SNCAIP-222ENST00000542191 CCDC24Q8N4L8 307 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms