RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 TPTE2Q6XPS3 522 aa18.87■□□□□ 0.61
COPS7A-212ENST00000541866 NBPF15Q8N660 670 aa18.87■□□□□ 0.61
COPS7A-212ENST00000541866 PLEKHF1Q96S99 279 aa18.87■□□□□ 0.61
COPS7A-212ENST00000541866 PCDH10Q9P2E7 1040 aa18.87■□□□□ 0.61
COPS7A-212ENST00000541866 NIP7Q9Y221 180 aaKnown RBP eCLIP18.87■□□□□ 0.61
COPS7A-212ENST00000541866 NFKBIEO00221 500 aa18.86■□□□□ 0.61
COPS7A-212ENST00000541866 FSTL1Q12841 308 aa18.86■□□□□ 0.61
COPS7A-212ENST00000541866 COL13A1Q5TAT6 717 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-212ENST00000541866 STYK1Q6J9G0 422 aa18.86■□□□□ 0.61
COPS7A-212ENST00000541866 NGEFQ8N5V2 710 aa18.86■□□□□ 0.61
COPS7A-212ENST00000541866 MASTLQ96GX5 879 aa18.86■□□□□ 0.61
COPS7A-212ENST00000541866 SCN7AQ01118 1682 aa18.85■□□□□ 0.61
COPS7A-212ENST00000541866 GLTPD2A6NH11 291 aa18.85■□□□□ 0.61
COPS7A-212ENST00000541866 SRGNP10124 158 aa18.85■□□□□ 0.61
COPS7A-212ENST00000541866 GTF2E1P29083 439 aaPredicted RBP18.85■□□□□ 0.61
COPS7A-212ENST00000541866 DPY19L2Q6NUT2 758 aa18.85■□□□□ 0.61
COPS7A-212ENST00000541866 FAM177BA6PVY3 158 aa18.84■□□□□ 0.61
COPS7A-212ENST00000541866 RGL2O15211 777 aa18.84■□□□□ 0.61
COPS7A-212ENST00000541866 VEGFAP15692 232 aaPredicted RBP18.84■□□□□ 0.61
COPS7A-212ENST00000541866 RALBP1Q15311 655 aa18.84■□□□□ 0.61
COPS7A-212ENST00000541866 SOGA3Q5TF21 947 aa18.84■□□□□ 0.61
COPS7A-212ENST00000541866 THUMPD2Q9BTF0 503 aaKnown RBP18.84■□□□□ 0.61
COPS7A-212ENST00000541866 SBF1O95248 1867 aa18.84■□□□□ 0.61
COPS7A-212ENST00000541866 ERFEQ4G0M1 354 aa18.83■□□□□ 0.6
COPS7A-212ENST00000541866 PRPF40BQ6NWY9 871 aaKnown RBP18.83■□□□□ 0.6
COPS7A-212ENST00000541866 TAOK3Q9H2K8 898 aa18.83■□□□□ 0.6
COPS7A-212ENST00000541866 RRP7AQ9Y3A4 280 aaKnown RBP18.83■□□□□ 0.6
COPS7A-212ENST00000541866 DLEC1Q9Y238 1755 aa18.83■□□□□ 0.6
COPS7A-212ENST00000541866 EIF4A1P60842 406 aaKnown RBP18.82■□□□□ 0.6
COPS7A-212ENST00000541866 TNS4Q8IZW8 715 aa18.82■□□□□ 0.6
COPS7A-212ENST00000541866 SMC1BQ8NDV3 1235 aa18.82■□□□□ 0.6
COPS7A-212ENST00000541866 NPR1P16066 1061 aa18.81■□□□□ 0.6
COPS7A-212ENST00000541866 HLFQ16534 295 aa18.81■□□□□ 0.6
COPS7A-212ENST00000541866 KIF6Q6ZMV9 814 aa18.81■□□□□ 0.6
COPS7A-212ENST00000541866 ANKRD31Q8N7Z5 1873 aa18.81■□□□□ 0.6
COPS7A-212ENST00000541866 MYL6BP14649 208 aa18.8■□□□□ 0.6
COPS7A-212ENST00000541866 RIPK4P57078 832 aa18.8■□□□□ 0.6
COPS7A-212ENST00000541866 DDX10Q13206 875 aaKnown RBP18.8■□□□□ 0.6
COPS7A-212ENST00000541866 ERVV-1B6SEH8 477 aa18.79■□□□□ 0.6
COPS7A-212ENST00000541866 TSPYL4Q9UJ04 414 aa18.79■□□□□ 0.6
COPS7A-212ENST00000541866 LTBP3Q9NS15 1303 aa18.78■□□□□ 0.6
COPS7A-212ENST00000541866 DNAJC5GQ8N7S2 189 aa18.78■□□□□ 0.6
COPS7A-212ENST00000541866 NYXQ9GZU5 481 aa18.78■□□□□ 0.6
COPS7A-212ENST00000541866 MAP3K15Q6ZN16 1313 aa18.77■□□□□ 0.6
COPS7A-212ENST00000541866 ALDH1B1P30837 517 aa18.77■□□□□ 0.6
COPS7A-212ENST00000541866 LMOD3Q0VAK6 560 aa18.77■□□□□ 0.6
COPS7A-212ENST00000541866 CCDC93Q567U6 631 aa18.77■□□□□ 0.6
COPS7A-212ENST00000541866 TTLL7Q6ZT98 887 aa18.77■□□□□ 0.6
COPS7A-212ENST00000541866 BCORQ6W2J9 1755 aa18.77■□□□□ 0.6
COPS7A-212ENST00000541866 KLRG2A4D1S0 409 aaPredicted RBP18.76■□□□□ 0.59
COPS7A-212ENST00000541866 ZBTB3Q9H5J0 574 aa18.76■□□□□ 0.59
COPS7A-212ENST00000541866 TNRC6CQ9HCJ0 1690 aaKnown RBP18.76■□□□□ 0.59
COPS7A-212ENST00000541866 COL11A2P13942 1736 aaPredicted RBP18.75■□□□□ 0.59
COPS7A-212ENST00000541866 DLG5Q8TDM6 1919 aa18.75■□□□□ 0.59
COPS7A-212ENST00000541866 EIF2S2P20042 333 aaKnown RBP18.75■□□□□ 0.59
COPS7A-212ENST00000541866 HTRA3P83110 453 aa18.75■□□□□ 0.59
COPS7A-212ENST00000541866 C7orf43Q8WVR3 580 aa18.75■□□□□ 0.59
COPS7A-212ENST00000541866 CCDC88AQ3V6T2 1871 aa18.75■□□□□ 0.59
COPS7A-212ENST00000541866 SLX4Q8IY92 1834 aa18.74■□□□□ 0.59
COPS7A-212ENST00000541866 GPTP24298 496 aa18.74■□□□□ 0.59
COPS7A-212ENST00000541866 TMPOP42166 694 aaKnown RBP18.74■□□□□ 0.59
COPS7A-212ENST00000541866 NEUROD2Q15784 382 aa18.74■□□□□ 0.59
COPS7A-212ENST00000541866 NUTM1Q86Y26 1132 aa18.74■□□□□ 0.59
COPS7A-212ENST00000541866 RTKN2Q8IZC4 609 aa18.74■□□□□ 0.59
COPS7A-212ENST00000541866 BABAM1Q9NWV8 329 aa18.74■□□□□ 0.59
COPS7A-212ENST00000541866 ERBB4Q15303 1308 aa18.74■□□□□ 0.59
COPS7A-212ENST00000541866 MYBBP1AQ9BQG0 1328 aaKnown RBP18.74■□□□□ 0.59
COPS7A-212ENST00000541866 DDNO94850 711 aaPredicted RBP18.73■□□□□ 0.59
COPS7A-212ENST00000541866 POTECB2RU33 542 aa18.72■□□□□ 0.59
COPS7A-212ENST00000541866 FKBP4Q02790 459 aaKnown RBP eCLIP18.72■□□□□ 0.59
COPS7A-212ENST00000541866 WDR43Q15061 677 aaKnown RBP eCLIP18.72■□□□□ 0.59
COPS7A-212ENST00000541866 CCDC146Q8IYE0 955 aa18.72■□□□□ 0.59
COPS7A-212ENST00000541866 KLRG1Q96E93 195 aa18.72■□□□□ 0.59
COPS7A-212ENST00000541866 FER1L6Q2WGJ9 1857 aa18.71■□□□□ 0.59
COPS7A-212ENST00000541866 KDM3BQ7LBC6 1761 aa18.71■□□□□ 0.59
COPS7A-212ENST00000541866 SUSD4Q5VX71 490 aa18.71■□□□□ 0.59
COPS7A-212ENST00000541866 RPGRQ92834 1020 aaKnown RBP18.71■□□□□ 0.59
COPS7A-212ENST00000541866 OLFM4Q6UX06 510 aa18.7■□□□□ 0.58
COPS7A-212ENST00000541866 GIGYF2Q6Y7W6 1299 aaKnown RBP18.7■□□□□ 0.58
COPS7A-212ENST00000541866 PPP1R42Q7Z4L9 355 aa18.7■□□□□ 0.58
COPS7A-212ENST00000541866 TIAM2Q8IVF5 1701 aa18.7■□□□□ 0.58
COPS7A-212ENST00000541866 ZNF277Q9NRM2 450 aaPredicted RBP18.7■□□□□ 0.58
COPS7A-212ENST00000541866 LAMB4A4D0S4 1761 aa18.7■□□□□ 0.58
COPS7A-212ENST00000541866 CRY2Q49AN0 593 aa18.69■□□□□ 0.58
COPS7A-212ENST00000541866 ZNF34Q8IZ26 560 aa18.69■□□□□ 0.58
COPS7A-212ENST00000541866 SYNE4Q8N205 404 aa18.69■□□□□ 0.58
COPS7A-212ENST00000541866 LAS1LQ9Y4W2 734 aaKnown RBP18.69■□□□□ 0.58
COPS7A-212ENST00000541866 IQCA1LA6NCM1 817 aa18.68■□□□□ 0.58
COPS7A-212ENST00000541866 PARP10Q53GL7 1025 aa18.68■□□□□ 0.58
COPS7A-212ENST00000541866 CC2D2BQ6DHV5 1058 aa18.68■□□□□ 0.58
COPS7A-212ENST00000541866 NECTIN2Q92692 538 aa18.68■□□□□ 0.58
COPS7A-212ENST00000541866 RUNDC1Q96C34 613 aa18.68■□□□□ 0.58
COPS7A-212ENST00000541866 CACNA1SQ13698 1873 aa18.68■□□□□ 0.58
COPS7A-212ENST00000541866 UBN2Q6ZU65 1347 aa18.68■□□□□ 0.58
COPS7A-212ENST00000541866 ABCC12Q96J65 1359 aa18.68■□□□□ 0.58
COPS7A-212ENST00000541866 WDR90Q96KV7 1748 aa18.67■□□□□ 0.58
COPS7A-212ENST00000541866 ANXA1P04083 346 aa18.67■□□□□ 0.58
COPS7A-212ENST00000541866 PDIA6Q15084 440 aa18.67■□□□□ 0.58
COPS7A-212ENST00000541866 RBM17Q96I25 401 aaKnown RBP18.67■□□□□ 0.58
COPS7A-212ENST00000541866 DICER1Q9UPY3 1922 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms