RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 EIF4A2Q14240 407 aaKnown RBP13.59□□□□□ -0.23
CHFR-220ENST00000541817 CIAPIN1Q6FI81 312 aa13.59□□□□□ -0.23
CHFR-220ENST00000541817 PRR5LQ6MZQ0 368 aa13.59□□□□□ -0.23
CHFR-220ENST00000541817 BRIP1Q9BX63 1249 aa13.59□□□□□ -0.23
CHFR-220ENST00000541817 TRPM7Q96QT4 1865 aa13.59□□□□□ -0.23
CHFR-220ENST00000541817 SLC39A6Q13433 755 aa13.58□□□□□ -0.24
CHFR-220ENST00000541817 PLEKHO1Q53GL0 409 aaPredicted RBP13.58□□□□□ -0.24
CHFR-220ENST00000541817 ZIC5Q96T25 663 aa13.58□□□□□ -0.24
CHFR-220ENST00000541817 GJA3Q9Y6H8 435 aa13.58□□□□□ -0.24
CHFR-220ENST00000541817 TLL2Q9Y6L7 1015 aa13.58□□□□□ -0.24
CHFR-220ENST00000541817 MAP2K2P36507 400 aa13.57□□□□□ -0.24
CHFR-220ENST00000541817 CNKSR1Q969H4 720 aa13.57□□□□□ -0.24
CHFR-220ENST00000541817 TNNT2P45379 298 aaPredicted RBP13.56□□□□□ -0.24
CHFR-220ENST00000541817 CARD14Q9BXL6 1004 aa13.56□□□□□ -0.24
CHFR-220ENST00000541817 ANKRD26Q9UPS8 1709 aa13.56□□□□□ -0.24
CHFR-220ENST00000541817 NPHP1O15259 732 aa13.55□□□□□ -0.24
CHFR-220ENST00000541817 SRGNP10124 158 aa13.55□□□□□ -0.24
CHFR-220ENST00000541817 EPS15P42566 896 aa13.55□□□□□ -0.24
CHFR-220ENST00000541817 C1orf141Q5JVX7 400 aa13.55□□□□□ -0.24
CHFR-220ENST00000541817 STYK1Q6J9G0 422 aa13.55□□□□□ -0.24
CHFR-220ENST00000541817 POLKQ9UBT6 870 aa13.55□□□□□ -0.24
CHFR-220ENST00000541817 ZNF330Q9Y3S2 320 aaPredicted RBP13.55□□□□□ -0.24
CHFR-220ENST00000541817 CA12O43570 354 aa13.54□□□□□ -0.24
CHFR-220ENST00000541817 FKBP4Q02790 459 aaKnown RBP eCLIP13.54□□□□□ -0.24
CHFR-220ENST00000541817 CCDC93Q567U6 631 aa13.54□□□□□ -0.24
CHFR-220ENST00000541817 C7orf43Q8WVR3 580 aa13.54□□□□□ -0.24
CHFR-220ENST00000541817 TBC1D2BQ9UPU7 963 aa13.54□□□□□ -0.24
CHFR-220ENST00000541817 ARFGEF2Q9Y6D5 1785 aa13.53□□□□□ -0.24
CHFR-220ENST00000541817 FZD9O00144 591 aa13.53□□□□□ -0.24
CHFR-220ENST00000541817 CELF2O95319 508 aaKnown RBP13.53□□□□□ -0.24
CHFR-220ENST00000541817 BRPF1P55201 1214 aaPredicted RBP13.53□□□□□ -0.24
CHFR-220ENST00000541817 SOGA3Q5TF21 947 aa13.53□□□□□ -0.24
CHFR-220ENST00000541817 SAPCD2Q86UD0 394 aa13.53□□□□□ -0.24
CHFR-220ENST00000541817 AEBP1Q8IUX7 1158 aa13.53□□□□□ -0.24
CHFR-220ENST00000541817 MASTLQ96GX5 879 aa13.53□□□□□ -0.24
CHFR-220ENST00000541817 ZNF408Q9H9D4 720 aa13.53□□□□□ -0.24
CHFR-220ENST00000541817 PDZRN3Q9UPQ7 1066 aa13.53□□□□□ -0.24
CHFR-220ENST00000541817 IARSP41252 1262 aaKnown RBP13.52□□□□□ -0.25
CHFR-220ENST00000541817 GPC2Q8N158 579 aa13.52□□□□□ -0.25
CHFR-220ENST00000541817 SYNE4Q8N205 404 aa13.52□□□□□ -0.25
CHFR-220ENST00000541817 LGR6Q9HBX8 967 aa13.52□□□□□ -0.25
CHFR-220ENST00000541817 SCN11AQ9UI33 1791 aa13.51□□□□□ -0.25
CHFR-220ENST00000541817 LMOD1P29536 600 aaPredicted RBP13.51□□□□□ -0.25
CHFR-220ENST00000541817 HABP4Q5JVS0 413 aaKnown RBP13.51□□□□□ -0.25
CHFR-220ENST00000541817 CNBD1Q8NA66 436 aa13.51□□□□□ -0.25
CHFR-220ENST00000541817 SCNN1DP51172 638 aa13.5□□□□□ -0.25
CHFR-220ENST00000541817 EIF5P55010 431 aaKnown RBP13.5□□□□□ -0.25
CHFR-220ENST00000541817 AMOTQ4VCS5 1084 aa13.5□□□□□ -0.25
CHFR-220ENST00000541817 GLIS2Q9BZE0 524 aaPredicted RBP13.5□□□□□ -0.25
CHFR-220ENST00000541817 COL4A5P29400 1685 aa13.5□□□□□ -0.25
CHFR-220ENST00000541817 ST5P78524 1137 aa13.49□□□□□ -0.25
CHFR-220ENST00000541817 DLK2Q6UY11 383 aa13.48□□□□□ -0.25
CHFR-220ENST00000541817 SETDB2Q96T68 719 aa13.48□□□□□ -0.25
CHFR-220ENST00000541817 SLC52A2Q9HAB3 445 aa13.48□□□□□ -0.25
CHFR-220ENST00000541817 EIF6P56537 245 aaKnown RBP13.47□□□□□ -0.25
CHFR-220ENST00000541817 SLC51AQ86UW1 340 aa13.47□□□□□ -0.25
CHFR-220ENST00000541817 SCN7AQ01118 1682 aa13.47□□□□□ -0.25
CHFR-220ENST00000541817 TRPA1O75762 1119 aa13.46□□□□□ -0.25
CHFR-220ENST00000541817 USP50Q70EL3 339 aaPredicted RBP13.46□□□□□ -0.25
CHFR-220ENST00000541817 NBPF15Q8N660 670 aa13.46□□□□□ -0.25
CHFR-220ENST00000541817 JDP2Q8WYK2 163 aa13.46□□□□□ -0.25
CHFR-220ENST00000541817 A0A087WZG4 1122 aa13.45□□□□□ -0.26
CHFR-220ENST00000541817 FAM177BA6PVY3 158 aa13.45□□□□□ -0.26
CHFR-220ENST00000541817 NPR1P16066 1061 aa13.45□□□□□ -0.26
CHFR-220ENST00000541817 RTKN2Q8IZC4 609 aa13.45□□□□□ -0.26
CHFR-220ENST00000541817 GCC1Q96CN9 775 aa13.45□□□□□ -0.26
CHFR-220ENST00000541817 HPS5Q9UPZ3 1129 aa13.45□□□□□ -0.26
CHFR-220ENST00000541817 SULT6B1Q6IMI4 303 aa13.44□□□□□ -0.26
CHFR-220ENST00000541817 BCORQ6W2J9 1755 aa13.43□□□□□ -0.26
CHFR-220ENST00000541817 RNMTO43148 476 aaKnown RBP13.43□□□□□ -0.26
CHFR-220ENST00000541817 CAMTA2O94983 1202 aa13.43□□□□□ -0.26
CHFR-220ENST00000541817 HUNKP57058 714 aa13.43□□□□□ -0.26
CHFR-220ENST00000541817 NOGQ13253 232 aa13.43□□□□□ -0.26
CHFR-220ENST00000541817 CTU1Q7Z7A3 348 aaKnown RBP13.43□□□□□ -0.26
CHFR-220ENST00000541817 NBPF5PQ86XG9 351 aaPredicted RBP13.43□□□□□ -0.26
CHFR-220ENST00000541817 HHIPL1Q96JK4 782 aa13.43□□□□□ -0.26
CHFR-220ENST00000541817 RNF186Q9NXI6 227 aa13.43□□□□□ -0.26
CHFR-220ENST00000541817 STARD3NLO95772 234 aa13.42□□□□□ -0.26
CHFR-220ENST00000541817 A1BGP04217 495 aa13.42□□□□□ -0.26
CHFR-220ENST00000541817 PIP4K2AP48426 406 aaPredicted RBP13.42□□□□□ -0.26
CHFR-220ENST00000541817 FXR1P51114 621 aaKnown RBP eCLIP13.42□□□□□ -0.26
CHFR-220ENST00000541817 KIF23Q02241 960 aaPredicted RBP13.42□□□□□ -0.26
CHFR-220ENST00000541817 FAM155AB1AL88 458 aaPredicted RBP13.41□□□□□ -0.26
CHFR-220ENST00000541817 TCERG1O14776 1098 aaKnown RBP13.41□□□□□ -0.26
CHFR-220ENST00000541817 AKAP4Q5JQC9 854 aa13.41□□□□□ -0.26
CHFR-220ENST00000541817 VSIG10Q8N0Z9 540 aa13.41□□□□□ -0.26
CHFR-220ENST00000541817 LARGE2Q8N3Y3 721 aa13.41□□□□□ -0.26
CHFR-220ENST00000541817 ADARB2Q9NS39 739 aaKnown RBP13.41□□□□□ -0.26
CHFR-220ENST00000541817 DLL1O00548 723 aa13.4□□□□□ -0.26
CHFR-220ENST00000541817 GPRC5DQ9NZD1 345 aa13.4□□□□□ -0.26
CHFR-220ENST00000541817 AKAP11Q9UKA4 1901 aa13.4□□□□□ -0.26
CHFR-220ENST00000541817 SHTN1A0MZ66 631 aa13.39□□□□□ -0.27
CHFR-220ENST00000541817 HIRAP54198 1017 aaPredicted RBP13.39□□□□□ -0.27
CHFR-220ENST00000541817 USP48Q86UV5 1035 aa13.39□□□□□ -0.27
CHFR-220ENST00000541817 DZIP3Q86Y13 1208 aaKnown RBP13.39□□□□□ -0.27
CHFR-220ENST00000541817 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
CHFR-220ENST00000541817 UBR2Q8IWV8 1755 aa13.38□□□□□ -0.27
CHFR-220ENST00000541817 SLC24A1O60721 1099 aa13.38□□□□□ -0.27
CHFR-220ENST00000541817 RGMBQ6NW40 437 aa13.38□□□□□ -0.27
CHFR-220ENST00000541817 ZNF496Q96IT1 587 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms