RNA–Protein interactions for RNA: ENST00000541806.5

CLDN2-203, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 3,150 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-203ENST00000541806 NCOA3Q9Y6Q9 1424 aa10.49□□□□□ -0.73
CLDN2-203ENST00000541806 GRM8O00222 908 aa10.49□□□□□ -0.73
CLDN2-203ENST00000541806 CYP27B1O15528 508 aa10.49□□□□□ -0.73
CLDN2-203ENST00000541806 DDX54Q8TDD1 881 aaKnown RBP10.49□□□□□ -0.73
CLDN2-203ENST00000541806 STAP2Q9UGK3 403 aa10.49□□□□□ -0.73
CLDN2-203ENST00000541806 ZNF142P52746 1687 aaPredicted RBP10.48□□□□□ -0.73
CLDN2-203ENST00000541806 NEXNQ0ZGT2 675 aa10.48□□□□□ -0.73
CLDN2-203ENST00000541806 PI4K2BQ8TCG2 481 aa10.48□□□□□ -0.73
CLDN2-203ENST00000541806 PANK2Q9BZ23 570 aa10.48□□□□□ -0.73
CLDN2-203ENST00000541806 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.48□□□□□ -0.73
CLDN2-203ENST00000541806 G3BP1Q13283 466 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLDN2-203ENST00000541806 PDIA6Q15084 440 aa10.47□□□□□ -0.73
CLDN2-203ENST00000541806 CNTROBQ8N137 903 aa10.47□□□□□ -0.73
CLDN2-203ENST00000541806 LINS1Q8NG48 757 aa10.47□□□□□ -0.73
CLDN2-203ENST00000541806 MST1RQ04912 1400 aa10.47□□□□□ -0.73
CLDN2-203ENST00000541806 GOLGA6L22H0YM25 854 aa10.47□□□□□ -0.73
CLDN2-203ENST00000541806 ALDH1L1O75891 902 aa10.47□□□□□ -0.73
CLDN2-203ENST00000541806 HSP90AB4PQ58FF6 505 aa10.47□□□□□ -0.73
CLDN2-203ENST00000541806 CHMP3Q9Y3E7 222 aa10.47□□□□□ -0.73
CLDN2-203ENST00000541806 BAG4O95429 457 aaKnown RBP10.47□□□□□ -0.73
CLDN2-203ENST00000541806 IGKV5-2P06315 115 aa10.47□□□□□ -0.73
CLDN2-203ENST00000541806 KIAA1211Q6ZU35 1233 aa10.47□□□□□ -0.73
CLDN2-203ENST00000541806 TMX3Q96JJ7 454 aa10.47□□□□□ -0.73
CLDN2-203ENST00000541806 DIAPH3Q9NSV4 1193 aa10.47□□□□□ -0.73
CLDN2-203ENST00000541806 PRDM4Q9UKN5 801 aa10.47□□□□□ -0.73
CLDN2-203ENST00000541806 DDX49Q9Y6V7 483 aaKnown RBP10.47□□□□□ -0.73
CLDN2-203ENST00000541806 MEGF6O75095 1541 aa10.46□□□□□ -0.73
CLDN2-203ENST00000541806 L1TD1Q5T7N2 865 aaKnown RBP10.46□□□□□ -0.73
CLDN2-203ENST00000541806 SLIT3O75094 1523 aa10.46□□□□□ -0.74
CLDN2-203ENST00000541806 CPA1P15085 419 aa10.46□□□□□ -0.74
CLDN2-203ENST00000541806 GTF2E1P29083 439 aaPredicted RBP10.46□□□□□ -0.74
CLDN2-203ENST00000541806 LARP1Q6PKG0 1096 aaKnown RBP10.46□□□□□ -0.74
CLDN2-203ENST00000541806 SAMD1Q6SPF0 538 aaPredicted RBP10.46□□□□□ -0.74
CLDN2-203ENST00000541806 KDM6AO15550 1401 aaPredicted RBP10.46□□□□□ -0.74
CLDN2-203ENST00000541806 PXDNLA1KZ92 1463 aa10.46□□□□□ -0.74
CLDN2-203ENST00000541806 XRCC6P12956 609 aaKnown RBP eCLIP10.45□□□□□ -0.74
CLDN2-203ENST00000541806 EPHA10Q5JZY3 1008 aa10.45□□□□□ -0.74
CLDN2-203ENST00000541806 ANKRD13DQ6ZTN6 518 aa10.45□□□□□ -0.74
CLDN2-203ENST00000541806 UBE3BQ7Z3V4 1068 aa10.45□□□□□ -0.74
CLDN2-203ENST00000541806 KAZALD1Q96I82 304 aa10.45□□□□□ -0.74
CLDN2-203ENST00000541806 BOLA2Q9H3K6 86 aa10.45□□□□□ -0.74
CLDN2-203ENST00000541806 TLR7Q9NYK1 1049 aaKnown RBP10.45□□□□□ -0.74
CLDN2-203ENST00000541806 SNRPA1P09661 255 aaKnown RBP10.45□□□□□ -0.74
CLDN2-203ENST00000541806 BRINP3Q76B58 766 aa10.45□□□□□ -0.74
CLDN2-203ENST00000541806 DCAF5Q96JK2 942 aa10.45□□□□□ -0.74
CLDN2-203ENST00000541806 NCAPD2Q15021 1401 aa10.45□□□□□ -0.74
CLDN2-203ENST00000541806 MED1Q15648 1581 aaPredicted RBP10.45□□□□□ -0.74
CLDN2-203ENST00000541806 SPATA31A3Q5VYP0 1347 aa10.45□□□□□ -0.74
CLDN2-203ENST00000541806 FMNL2Q96PY5 1086 aa10.45□□□□□ -0.74
CLDN2-203ENST00000541806 ECHDC1Q9NTX5 307 aa10.45□□□□□ -0.74
CLDN2-203ENST00000541806 NEURL1BA8MQ27 555 aa10.44□□□□□ -0.74
CLDN2-203ENST00000541806 GLRX3O76003 335 aaKnown RBP10.44□□□□□ -0.74
CLDN2-203ENST00000541806 KCNJ4P48050 445 aa10.44□□□□□ -0.74
CLDN2-203ENST00000541806 EVA1CP58658 441 aa10.44□□□□□ -0.74
CLDN2-203ENST00000541806 NUCB2P80303 420 aa10.44□□□□□ -0.74
CLDN2-203ENST00000541806 EAF2Q96CJ1 260 aaPredicted RBP10.44□□□□□ -0.74
CLDN2-203ENST00000541806 NDUFB9Q9Y6M9 179 aa10.44□□□□□ -0.74
CLDN2-203ENST00000541806 PRPF40AO75400 957 aaKnown RBP10.44□□□□□ -0.74
CLDN2-203ENST00000541806 SASH1O94885 1247 aa10.44□□□□□ -0.74
CLDN2-203ENST00000541806 GCKRQ14397 625 aa10.44□□□□□ -0.74
CLDN2-203ENST00000541806 GPATCH3Q96I76 525 aa10.44□□□□□ -0.74
CLDN2-203ENST00000541806 FBXO3Q9UK99 471 aa10.44□□□□□ -0.74
CLDN2-203ENST00000541806 RGPD5Q99666 1765 aa10.44□□□□□ -0.74
CLDN2-203ENST00000541806 USP54Q70EL1 1684 aa10.44□□□□□ -0.74
CLDN2-203ENST00000541806 ZNF335Q9H4Z2 1342 aaPredicted RBP10.43□□□□□ -0.74
CLDN2-203ENST00000541806 SGSM2O43147 1006 aa10.43□□□□□ -0.74
CLDN2-203ENST00000541806 EDC3Q96F86 508 aaKnown RBP10.43□□□□□ -0.74
CLDN2-203ENST00000541806 AK9Q5TCS8 1911 aa10.43□□□□□ -0.74
CLDN2-203ENST00000541806 A0A087WZG4 1122 aa10.43□□□□□ -0.74
CLDN2-203ENST00000541806 A0A0G2JS52 829 aa10.43□□□□□ -0.74
CLDN2-203ENST00000541806 RASEFQ8IZ41 740 aa10.43□□□□□ -0.74
CLDN2-203ENST00000541806 A1BGP04217 495 aa10.42□□□□□ -0.74
CLDN2-203ENST00000541806 METTL22Q9BUU2 404 aaPredicted RBP10.42□□□□□ -0.74
CLDN2-203ENST00000541806 ZBTB3Q9H5J0 574 aa10.42□□□□□ -0.74
CLDN2-203ENST00000541806 HDAC5Q9UQL6 1122 aa10.42□□□□□ -0.74
CLDN2-203ENST00000541806 HEG1Q9ULI3 1381 aa10.42□□□□□ -0.74
CLDN2-203ENST00000541806 PTH1RQ03431 593 aa10.42□□□□□ -0.74
CLDN2-203ENST00000541806 PRPF40BQ6NWY9 871 aaKnown RBP10.42□□□□□ -0.74
CLDN2-203ENST00000541806 CAVIN1Q6NZI2 390 aaKnown RBP10.42□□□□□ -0.74
CLDN2-203ENST00000541806 GAS2L3Q86XJ1 694 aa10.42□□□□□ -0.74
CLDN2-203ENST00000541806 ERC1Q8IUD2 1116 aa10.42□□□□□ -0.74
CLDN2-203ENST00000541806 ZCRB1Q8TBF4 217 aaKnown RBP10.42□□□□□ -0.74
CLDN2-203ENST00000541806 FAM227BQ96M60 508 aa10.42□□□□□ -0.74
CLDN2-203ENST00000541806 TNS3Q68CZ2 1445 aa10.42□□□□□ -0.74
CLDN2-203ENST00000541806 AOX1Q06278 1338 aa10.42□□□□□ -0.74
CLDN2-203ENST00000541806 CWC22Q9HCG8 908 aaKnown RBP10.42□□□□□ -0.74
CLDN2-203ENST00000541806 SLAIN2Q9P270 581 aa10.42□□□□□ -0.74
CLDN2-203ENST00000541806 ZDHHC9Q9Y397 364 aa10.42□□□□□ -0.74
CLDN2-203ENST00000541806 HSPA4P34932 840 aa10.41□□□□□ -0.74
CLDN2-203ENST00000541806 MTX1Q13505 466 aa10.41□□□□□ -0.74
CLDN2-203ENST00000541806 FSD1Q9BTV5 496 aa10.41□□□□□ -0.74
CLDN2-203ENST00000541806 SNX14Q9Y5W7 946 aa10.41□□□□□ -0.74
CLDN2-203ENST00000541806 TTLL7Q6ZT98 887 aa10.41□□□□□ -0.74
CLDN2-203ENST00000541806 GRPEL1Q9HAV7 217 aa10.41□□□□□ -0.74
CLDN2-203ENST00000541806 LMO7Q8WWI1 1683 aa10.41□□□□□ -0.74
CLDN2-203ENST00000541806 KDM3BQ7LBC6 1761 aa10.41□□□□□ -0.74
CLDN2-203ENST00000541806 CASTP20810 708 aaKnown RBP10.4□□□□□ -0.74
CLDN2-203ENST00000541806 SKOR2Q2VWA4 1001 aaPredicted RBP10.4□□□□□ -0.74
CLDN2-203ENST00000541806 ZFP91Q96JP5 570 aaPredicted RBP10.4□□□□□ -0.74
CLDN2-203ENST00000541806 CCDC85AQ96PX6 553 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms