RNA–Protein interactions for RNA: ENST00000541347.5

CX3CR1-205, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-205ENST00000541347 TMOD3Q9NYL9 352 aa13.23□□□□□ -0.29
CX3CR1-205ENST00000541347 PLBD2Q8NHP8 589 aa13.22□□□□□ -0.29
CX3CR1-205ENST00000541347 TUBGCP6Q96RT7 1819 aa13.22□□□□□ -0.29
CX3CR1-205ENST00000541347 A1BGP04217 495 aa13.21□□□□□ -0.29
CX3CR1-205ENST00000541347 USP26Q9BXU7 913 aa13.21□□□□□ -0.29
CX3CR1-205ENST00000541347 PA2G4Q9UQ80 394 aaKnown RBP13.21□□□□□ -0.29
CX3CR1-205ENST00000541347 MYT1Q01538 1121 aa13.21□□□□□ -0.29
CX3CR1-205ENST00000541347 OS9Q13438 667 aaPredicted RBP13.21□□□□□ -0.29
CX3CR1-205ENST00000541347 PIGBQ92521 554 aa13.21□□□□□ -0.3
CX3CR1-205ENST00000541347 SNX21Q969T3 373 aa13.21□□□□□ -0.3
CX3CR1-205ENST00000541347 SLKQ9H2G2 1235 aaPredicted RBP13.21□□□□□ -0.3
CX3CR1-205ENST00000541347 ARFGEF2Q9Y6D5 1785 aa13.2□□□□□ -0.3
CX3CR1-205ENST00000541347 RTL5Q5HYW3 569 aaPredicted RBP13.2□□□□□ -0.3
CX3CR1-205ENST00000541347 HSCBQ8IWL3 235 aa13.2□□□□□ -0.3
CX3CR1-205ENST00000541347 ANTXR1Q9H6X2 564 aa13.2□□□□□ -0.3
CX3CR1-205ENST00000541347 TRIM6-TRIM34B2RNG4 842 aa13.2□□□□□ -0.3
CX3CR1-205ENST00000541347 PI4K2BQ8TCG2 481 aa13.2□□□□□ -0.3
CX3CR1-205ENST00000541347 RILPL2Q969X0 211 aa13.2□□□□□ -0.3
CX3CR1-205ENST00000541347 ATP5J2-PTCD1G3V325 749 aa13.19□□□□□ -0.3
CX3CR1-205ENST00000541347 ERC2O15083 957 aa13.19□□□□□ -0.3
CX3CR1-205ENST00000541347 EPHA10Q5JZY3 1008 aa13.19□□□□□ -0.3
CX3CR1-205ENST00000541347 PHLPP1O60346 1717 aa13.19□□□□□ -0.3
CX3CR1-205ENST00000541347 PLCH1Q4KWH8 1693 aa13.19□□□□□ -0.3
CX3CR1-205ENST00000541347 NFKBIBQ15653 356 aa13.19□□□□□ -0.3
CX3CR1-205ENST00000541347 TTLL7Q6ZT98 887 aa13.19□□□□□ -0.3
CX3CR1-205ENST00000541347 ERC1Q8IUD2 1116 aa13.19□□□□□ -0.3
CX3CR1-205ENST00000541347 UNC5CLQ8IV45 518 aa13.19□□□□□ -0.3
CX3CR1-205ENST00000541347 ASAP1Q9ULH1 1129 aa13.19□□□□□ -0.3
CX3CR1-205ENST00000541347 ADAMTS2O95450 1211 aa13.19□□□□□ -0.3
CX3CR1-205ENST00000541347 JARID2Q92833 1246 aaPredicted RBP13.19□□□□□ -0.3
CX3CR1-205ENST00000541347 REC8O95072 547 aa13.18□□□□□ -0.3
CX3CR1-205ENST00000541347 CLASRPQ8N2M8 674 aaKnown RBP13.18□□□□□ -0.3
CX3CR1-205ENST00000541347 SPRYD3Q8NCJ5 442 aa13.18□□□□□ -0.3
CX3CR1-205ENST00000541347 EXOC5O00471 708 aa13.18□□□□□ -0.3
CX3CR1-205ENST00000541347 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
CX3CR1-205ENST00000541347 ATG3Q9NT62 314 aa13.18□□□□□ -0.3
CX3CR1-205ENST00000541347 USP42Q9H9J4 1324 aaKnown RBP13.18□□□□□ -0.3
CX3CR1-205ENST00000541347 CHMLP26374 656 aa13.17□□□□□ -0.3
CX3CR1-205ENST00000541347 UBE3BQ7Z3V4 1068 aa13.17□□□□□ -0.3
CX3CR1-205ENST00000541347 A0A087WZG4 1122 aa13.17□□□□□ -0.3
CX3CR1-205ENST00000541347 ESYT1Q9BSJ8 1104 aa13.17□□□□□ -0.3
CX3CR1-205ENST00000541347 AFDNP55196 1824 aaKnown RBP13.17□□□□□ -0.3
CX3CR1-205ENST00000541347 SASH1O94885 1247 aa13.17□□□□□ -0.3
CX3CR1-205ENST00000541347 CASP7P55210 303 aa13.17□□□□□ -0.3
CX3CR1-205ENST00000541347 VSIG10Q8N0Z9 540 aa13.17□□□□□ -0.3
CX3CR1-205ENST00000541347 COL15A1P39059 1388 aa13.17□□□□□ -0.3
CX3CR1-205ENST00000541347 CD2BP2O95400 341 aaKnown RBP13.16□□□□□ -0.3
CX3CR1-205ENST00000541347 G3BP1Q13283 466 aaKnown RBP eCLIP13.16□□□□□ -0.3
CX3CR1-205ENST00000541347 TTC41PQ6P2S7 1318 aa13.16□□□□□ -0.3
CX3CR1-205ENST00000541347 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
CX3CR1-205ENST00000541347 MAP4K4O95819 1239 aaPredicted RBP13.16□□□□□ -0.3
CX3CR1-205ENST00000541347 KLHDC4Q8TBB5 520 aa13.16□□□□□ -0.3
CX3CR1-205ENST00000541347 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.16□□□□□ -0.3
CX3CR1-205ENST00000541347 BCL9O00512 1426 aa13.16□□□□□ -0.3
CX3CR1-205ENST00000541347 PIP4K2BP78356 416 aa13.15□□□□□ -0.3
CX3CR1-205ENST00000541347 RABL6Q3YEC7 729 aaPredicted RBP13.15□□□□□ -0.3
CX3CR1-205ENST00000541347 ZBTB3Q9H5J0 574 aa13.15□□□□□ -0.3
CX3CR1-205ENST00000541347 ITGB4P16144 1822 aa13.15□□□□□ -0.3
CX3CR1-205ENST00000541347 DNAJC10Q8IXB1 793 aa13.15□□□□□ -0.3
CX3CR1-205ENST00000541347 TEX13AQ9BXU3 409 aaPredicted RBP13.15□□□□□ -0.3
CX3CR1-205ENST00000541347 SIL1Q9H173 461 aa13.15□□□□□ -0.3
CX3CR1-205ENST00000541347 WNK3Q9BYP7 1800 aa13.15□□□□□ -0.3
CX3CR1-205ENST00000541347 LRP6O75581 1613 aa13.15□□□□□ -0.3
CX3CR1-205ENST00000541347 SPATA31A1Q5TZJ5 1347 aa13.15□□□□□ -0.3
CX3CR1-205ENST00000541347 H7C1W4 665 aa13.15□□□□□ -0.3
CX3CR1-205ENST00000541347 TOM1O60784 492 aa13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 IFIT2P09913 472 aaKnown RBP13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 RFX5P48382 616 aaPredicted RBP13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 AACSQ86V21 672 aa13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 NRAPQ86VF7 1730 aa13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 NUTM2BA6NNL0 878 aaPredicted RBP13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 NUTM2EB1AL46 878 aaPredicted RBP13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 RABEP1Q15276 862 aa13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 NUTM2AQ8IVF1 878 aaPredicted RBP13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 CWC25Q9NXE8 425 aaPredicted RBP13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 GLRX3O76003 335 aaKnown RBP13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 CDCA7Q9BWT1 371 aaPredicted RBP13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 COPRSQ9NQ92 184 aa13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 ECHDC1Q9NTX5 307 aa13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 THRAP3Q9Y2W1 955 aaKnown RBP13.14□□□□□ -0.31
CX3CR1-205ENST00000541347 FRAT2O75474 233 aaPredicted RBP13.13□□□□□ -0.31
CX3CR1-205ENST00000541347 CNTROBQ8N137 903 aa13.13□□□□□ -0.31
CX3CR1-205ENST00000541347 EAF2Q96CJ1 260 aaPredicted RBP13.13□□□□□ -0.31
CX3CR1-205ENST00000541347 PTPN12Q05209 780 aaKnown RBP13.13□□□□□ -0.31
CX3CR1-205ENST00000541347 GPATCH3Q96I76 525 aa13.13□□□□□ -0.31
CX3CR1-205ENST00000541347 K7ELQ4 463 aaPredicted RBP13.12□□□□□ -0.31
CX3CR1-205ENST00000541347 STARD3NLO95772 234 aa13.12□□□□□ -0.31
CX3CR1-205ENST00000541347 FOXO4P98177 505 aa13.12□□□□□ -0.31
CX3CR1-205ENST00000541347 CCDC191Q8NCU4 936 aa13.12□□□□□ -0.31
CX3CR1-205ENST00000541347 SYTL4Q96C24 671 aaPredicted RBP13.12□□□□□ -0.31
CX3CR1-205ENST00000541347 SLC4A9Q96Q91 983 aa13.12□□□□□ -0.31
CX3CR1-205ENST00000541347 PRIM1P49642 420 aaKnown RBP13.12□□□□□ -0.31
CX3CR1-205ENST00000541347 CCDC8Q9H0W5 538 aaPredicted RBP13.12□□□□□ -0.31
CX3CR1-205ENST00000541347 IL25Q9H293 177 aa13.12□□□□□ -0.31
CX3CR1-205ENST00000541347 ZNF330Q9Y3S2 320 aaPredicted RBP13.12□□□□□ -0.31
CX3CR1-205ENST00000541347 TJP1Q07157 1748 aa13.11□□□□□ -0.31
CX3CR1-205ENST00000541347 LMBR1LQ6UX01 489 aa13.11□□□□□ -0.31
CX3CR1-205ENST00000541347 ANO2Q9NQ90 1003 aa13.11□□□□□ -0.31
CX3CR1-205ENST00000541347 DDIT3P35638 169 aa13.11□□□□□ -0.31
CX3CR1-205ENST00000541347 DDB1Q16531 1140 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms