RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 CC2D1AQ6P1N0 951 aaPredicted RBP7.33□□□□□ -1.24
LMO3-225ENST00000541295 MORC1Q86VD1 984 aa7.33□□□□□ -1.24
LMO3-225ENST00000541295 FMNL3Q8IVF7 1028 aa7.33□□□□□ -1.24
LMO3-225ENST00000541295 MICALL1Q8N3F8 863 aa7.33□□□□□ -1.24
LMO3-225ENST00000541295 SMCR8Q8TEV9 937 aaPredicted RBP7.33□□□□□ -1.24
LMO3-225ENST00000541295 TBC1D22AQ8WUA7 517 aa7.33□□□□□ -1.24
LMO3-225ENST00000541295 TNPO1Q92973 898 aaKnown RBP7.33□□□□□ -1.24
LMO3-225ENST00000541295 AGLP35573 1532 aa7.33□□□□□ -1.24
LMO3-225ENST00000541295 NEXMIFQ5QGS0 1516 aa7.33□□□□□ -1.24
LMO3-225ENST00000541295 NOP2P46087 812 aaKnown RBP7.33□□□□□ -1.24
LMO3-225ENST00000541295 SRPK2P78362 688 aaKnown RBP7.33□□□□□ -1.24
LMO3-225ENST00000541295 TRAF1Q13077 416 aa7.33□□□□□ -1.24
LMO3-225ENST00000541295 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.33□□□□□ -1.24
LMO3-225ENST00000541295 LMNB1P20700 586 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 SESN3P58005 492 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 BMS1Q14692 1282 aaKnown RBP7.32□□□□□ -1.24
LMO3-225ENST00000541295 TBC1D10BQ4KMP7 808 aaPredicted RBP7.32□□□□□ -1.24
LMO3-225ENST00000541295 CCDC92Q53HC0 331 aaPredicted RBP7.32□□□□□ -1.24
LMO3-225ENST00000541295 RPUSD2Q8IZ73 545 aaKnown RBP7.32□□□□□ -1.24
LMO3-225ENST00000541295 LRRC27Q9C0I9 530 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 CABP2Q9NPB3 220 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 USP25Q9UHP3 1055 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 NRBP1Q9UHY1 535 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 PER1O15534 1290 aaPredicted RBP7.32□□□□□ -1.24
LMO3-225ENST00000541295 PARNO95453 639 aaKnown RBP7.32□□□□□ -1.24
LMO3-225ENST00000541295 ECEL1O95672 775 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 INF2Q27J81 1249 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 TRIM74Q86UV6 250 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 TRIM73Q86UV7 250 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 LCA5Q86VQ0 697 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 NLRP13Q86W25 1043 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 LSM14AQ8ND56 463 aaKnown RBP7.32□□□□□ -1.24
LMO3-225ENST00000541295 SLC12A5Q9H2X9 1139 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 ZNF232Q9UNY5 417 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 NAT2P11245 290 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 BECN1Q14457 450 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 TTC30AQ86WT1 665 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 PNISRQ8TF01 805 aaKnown RBP7.32□□□□□ -1.24
LMO3-225ENST00000541295 GBP4Q96PP9 640 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 PRAM1Q96QH2 718 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 PAGR1Q9BTK6 254 aa7.32□□□□□ -1.24
LMO3-225ENST00000541295 POLR3CQ9BUI4 534 aaPredicted RBP7.32□□□□□ -1.24
LMO3-225ENST00000541295 RWDD1Q9H446 243 aaPredicted RBP7.32□□□□□ -1.24
LMO3-225ENST00000541295 NRXN1Q9ULB1 1477 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 NEURL4Q96JN8 1562 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 RBM47A0AV96 593 aaKnown RBP7.31□□□□□ -1.24
LMO3-225ENST00000541295 VDRP11473 427 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 SKILP12757 684 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 ABL2P42684 1182 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 NOM1Q5C9Z4 860 aaKnown RBP7.31□□□□□ -1.24
LMO3-225ENST00000541295 TDRD7Q8NHU6 1098 aaKnown RBP7.31□□□□□ -1.24
LMO3-225ENST00000541295 FAM212AQ96EL1 285 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 RMDN2Q96LZ7 410 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 CDCA7Q9BWT1 371 aaPredicted RBP7.31□□□□□ -1.24
LMO3-225ENST00000541295 ETAA1Q9NY74 926 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 TNRQ92752 1358 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 RIMS2Q9UQ26 1411 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 TRAK2O60296 914 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 OATP04181 439 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 XBP1P17861 261 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 ZSCAN30Q86W11 494 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 PHC3Q8NDX5 983 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 ANKRD20A12PQ8NF67 263 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 KIAA1210Q9ULL0 1709 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 KINO60870 393 aaKnown RBP7.31□□□□□ -1.24
LMO3-225ENST00000541295 MAP2K2P36507 400 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 SASS6Q6UVJ0 657 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 IFNLR1Q8IU57 520 aaPredicted RBP7.31□□□□□ -1.24
LMO3-225ENST00000541295 CCAR1Q8IX12 1150 aaKnown RBP7.31□□□□□ -1.24
LMO3-225ENST00000541295 TEKT1Q969V4 418 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 MAP3K20Q9NYL2 800 aaKnown RBP7.31□□□□□ -1.24
LMO3-225ENST00000541295 CHMP3Q9Y3E7 222 aa7.31□□□□□ -1.24
LMO3-225ENST00000541295 REREQ9P2R6 1566 aa7.3□□□□□ -1.24
LMO3-225ENST00000541295 TMEM131LA2VDJ0 1609 aa7.3□□□□□ -1.24
LMO3-225ENST00000541295 CFAP69A5D8W1 941 aa7.3□□□□□ -1.24
LMO3-225ENST00000541295 RDXP35241 583 aaKnown RBP7.3□□□□□ -1.24
LMO3-225ENST00000541295 SH3BGRP55822 239 aaPredicted RBP7.3□□□□□ -1.24
LMO3-225ENST00000541295 ZNF394Q53GI3 561 aa7.3□□□□□ -1.24
LMO3-225ENST00000541295 CADPS2Q86UW7 1296 aa7.3□□□□□ -1.24
LMO3-225ENST00000541295 VEZTQ9HBM0 779 aa7.3□□□□□ -1.24
LMO3-225ENST00000541295 THRAP3Q9Y2W1 955 aaKnown RBP7.3□□□□□ -1.24
LMO3-225ENST00000541295 KDM5AP29375 1690 aaKnown RBP7.3□□□□□ -1.24
LMO3-225ENST00000541295 XRCC6P12956 609 aaKnown RBP eCLIP7.3□□□□□ -1.24
LMO3-225ENST00000541295 EVC2Q86UK5 1308 aa7.3□□□□□ -1.24
LMO3-225ENST00000541295 SAMD3Q8N6K7 520 aa7.3□□□□□ -1.24
LMO3-225ENST00000541295 PARD3Q8TEW0 1356 aa7.3□□□□□ -1.24
LMO3-225ENST00000541295 FEZ1Q99689 392 aa7.3□□□□□ -1.24
LMO3-225ENST00000541295 DIS3Q9Y2L1 958 aaKnown RBP7.3□□□□□ -1.24
LMO3-225ENST00000541295 BRD4O60885 1362 aaPredicted RBP7.29□□□□□ -1.24
LMO3-225ENST00000541295 PPFIA3O75145 1194 aa7.29□□□□□ -1.24
LMO3-225ENST00000541295 VASPP50552 380 aaPredicted RBP7.29□□□□□ -1.24
LMO3-225ENST00000541295 CCDC15Q0P6D6 951 aa7.29□□□□□ -1.24
LMO3-225ENST00000541295 WAPLQ7Z5K2 1190 aa7.29□□□□□ -1.24
LMO3-225ENST00000541295 JRKLQ9Y4A0 524 aa7.29□□□□□ -1.24
LMO3-225ENST00000541295 ADGRB1O14514 1584 aa7.29□□□□□ -1.24
LMO3-225ENST00000541295 hCG_2014768A0A024R1R8 64 aa7.29□□□□□ -1.24
LMO3-225ENST00000541295 RASA3Q14644 834 aa7.29□□□□□ -1.24
LMO3-225ENST00000541295 UBE2Q1Q7Z7E8 422 aa7.29□□□□□ -1.24
LMO3-225ENST00000541295 ZC3H15Q8WU90 426 aaKnown RBP7.29□□□□□ -1.24
LMO3-225ENST00000541295 CEP89Q96ST8 783 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms