RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 MYH14Q7Z406 1995 aaKnown RBP12.19□□□□□ -0.46
TRAPPC1-202ENST00000540486 PTCD1O75127 700 aaKnown RBP12.19□□□□□ -0.46
TRAPPC1-202ENST00000540486 EPHX2P34913 555 aa12.19□□□□□ -0.46
TRAPPC1-202ENST00000540486 SOGA3Q5TF21 947 aa12.19□□□□□ -0.46
TRAPPC1-202ENST00000540486 INTS5Q6P9B9 1019 aaKnown RBP12.19□□□□□ -0.46
TRAPPC1-202ENST00000540486 ZNF622Q969S3 477 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRAPPC1-202ENST00000540486 GCC1Q96CN9 775 aa12.19□□□□□ -0.46
TRAPPC1-202ENST00000540486 DDX21Q9NR30 783 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRAPPC1-202ENST00000540486 NARFQ9UHQ1 456 aa12.19□□□□□ -0.46
TRAPPC1-202ENST00000540486 COL5A3P25940 1745 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC1-202ENST00000540486 DICER1Q9UPY3 1922 aaKnown RBP12.19□□□□□ -0.46
TRAPPC1-202ENST00000540486 SCN4AP35499 1836 aa12.18□□□□□ -0.46
TRAPPC1-202ENST00000540486 PDE6BP35913 854 aa12.18□□□□□ -0.46
TRAPPC1-202ENST00000540486 CABP4P57796 275 aa12.18□□□□□ -0.46
TRAPPC1-202ENST00000540486 MAP1SQ66K74 1059 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC1-202ENST00000540486 PAXIP1Q6ZW49 1069 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC1-202ENST00000540486 TSKSQ9UJT2 592 aa12.18□□□□□ -0.46
TRAPPC1-202ENST00000540486 HAX1O00165 279 aa12.17□□□□□ -0.46
TRAPPC1-202ENST00000540486 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
TRAPPC1-202ENST00000540486 CYP4F22Q6NT55 531 aa12.17□□□□□ -0.46
TRAPPC1-202ENST00000540486 EYA1Q99502 592 aa12.17□□□□□ -0.46
TRAPPC1-202ENST00000540486 BRIP1Q9BX63 1249 aa12.17□□□□□ -0.46
TRAPPC1-202ENST00000540486 DLEC1Q9Y238 1755 aa12.16□□□□□ -0.46
TRAPPC1-202ENST00000540486 CNKSR1Q969H4 720 aa12.16□□□□□ -0.46
TRAPPC1-202ENST00000540486 THSD7BQ9C0I4 1608 aa12.15□□□□□ -0.46
TRAPPC1-202ENST00000540486 SOS1Q07889 1333 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC1-202ENST00000540486 BRPF1P55201 1214 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC1-202ENST00000540486 GRM1Q13255 1194 aa12.15□□□□□ -0.46
TRAPPC1-202ENST00000540486 FAM212AQ96EL1 285 aa12.15□□□□□ -0.46
TRAPPC1-202ENST00000540486 TLL2Q9Y6L7 1015 aa12.15□□□□□ -0.46
TRAPPC1-202ENST00000540486 NRXN2Q9P2S2 1712 aa12.14□□□□□ -0.47
TRAPPC1-202ENST00000540486 WASHC2AQ641Q2 1341 aa12.14□□□□□ -0.47
TRAPPC1-202ENST00000540486 CDCA8Q53HL2 280 aa12.14□□□□□ -0.47
TRAPPC1-202ENST00000540486 BCL2L12Q9HB09 334 aa12.14□□□□□ -0.47
TRAPPC1-202ENST00000540486 EMILIN1Q9Y6C2 1016 aa12.14□□□□□ -0.47
TRAPPC1-202ENST00000540486 FER1L6Q2WGJ9 1857 aa12.14□□□□□ -0.47
TRAPPC1-202ENST00000540486 AOC2O75106 756 aa12.13□□□□□ -0.47
TRAPPC1-202ENST00000540486 SOX10P56693 466 aa12.13□□□□□ -0.47
TRAPPC1-202ENST00000540486 GSE1Q14687 1217 aa12.13□□□□□ -0.47
TRAPPC1-202ENST00000540486 ADAMTSL1Q8N6G6 1762 aa12.13□□□□□ -0.47
TRAPPC1-202ENST00000540486 AFDNP55196 1824 aaKnown RBP12.12□□□□□ -0.47
TRAPPC1-202ENST00000540486 PLEKHO1Q53GL0 409 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC1-202ENST00000540486 CST9Q5W186 159 aa12.12□□□□□ -0.47
TRAPPC1-202ENST00000540486 STYK1Q6J9G0 422 aa12.12□□□□□ -0.47
TRAPPC1-202ENST00000540486 NFATC2IPQ8NCF5 419 aa12.12□□□□□ -0.47
TRAPPC1-202ENST00000540486 HHIPL1Q96JK4 782 aa12.12□□□□□ -0.47
TRAPPC1-202ENST00000540486 CARD14Q9BXL6 1004 aa12.12□□□□□ -0.47
TRAPPC1-202ENST00000540486 CARMIL3Q8ND23 1372 aa12.12□□□□□ -0.47
TRAPPC1-202ENST00000540486 RNF123Q5XPI4 1314 aa12.11□□□□□ -0.47
TRAPPC1-202ENST00000540486 PPM1GO15355 546 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC1-202ENST00000540486 MTHFSP49914 203 aa12.11□□□□□ -0.47
TRAPPC1-202ENST00000540486 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
TRAPPC1-202ENST00000540486 GPC2Q8N158 579 aa12.11□□□□□ -0.47
TRAPPC1-202ENST00000540486 NBPF15Q8N660 670 aa12.11□□□□□ -0.47
TRAPPC1-202ENST00000540486 ZNF541Q9H0D2 1346 aa12.11□□□□□ -0.47
TRAPPC1-202ENST00000540486 CASP8AP2Q9UKL3 1982 aa12.1□□□□□ -0.47
TRAPPC1-202ENST00000540486 ADAMTS7Q9UKP4 1686 aa12.1□□□□□ -0.47
TRAPPC1-202ENST00000540486 COL15A1P39059 1388 aa12.1□□□□□ -0.47
TRAPPC1-202ENST00000540486 FZD9O00144 591 aa12.1□□□□□ -0.47
TRAPPC1-202ENST00000540486 CYP19A1P11511 503 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC1-202ENST00000540486 CCDC93Q567U6 631 aa12.1□□□□□ -0.47
TRAPPC1-202ENST00000540486 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
TRAPPC1-202ENST00000540486 DNAJC10Q8IXB1 793 aa12.1□□□□□ -0.47
TRAPPC1-202ENST00000540486 MASTLQ96GX5 879 aa12.1□□□□□ -0.47
TRAPPC1-202ENST00000540486 POLR3GLQ9BT43 218 aa12.1□□□□□ -0.47
TRAPPC1-202ENST00000540486 TSPYL2Q9H2G4 693 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC1-202ENST00000540486 LTBP1Q14766 1721 aa12.09□□□□□ -0.47
TRAPPC1-202ENST00000540486 FKBP4Q02790 459 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRAPPC1-202ENST00000540486 EVX2Q03828 476 aa12.09□□□□□ -0.47
TRAPPC1-202ENST00000540486 DCAF8Q5TAQ9 597 aa12.09□□□□□ -0.47
TRAPPC1-202ENST00000540486 BICDL1Q6ZP65 573 aa12.09□□□□□ -0.47
TRAPPC1-202ENST00000540486 SAPCD2Q86UD0 394 aa12.09□□□□□ -0.47
TRAPPC1-202ENST00000540486 C7orf43Q8WVR3 580 aa12.09□□□□□ -0.47
TRAPPC1-202ENST00000540486 SRGNP10124 158 aa12.08□□□□□ -0.48
TRAPPC1-202ENST00000540486 LMOD1P29536 600 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC1-202ENST00000540486 HABP4Q5JVS0 413 aaKnown RBP12.08□□□□□ -0.48
TRAPPC1-202ENST00000540486 PRR5LQ6MZQ0 368 aa12.08□□□□□ -0.48
TRAPPC1-202ENST00000540486 ZNF530Q6P9A1 599 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC1-202ENST00000540486 A0A087WZG4 1122 aa12.07□□□□□ -0.48
TRAPPC1-202ENST00000540486 FMR1Q06787 632 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRAPPC1-202ENST00000540486 C1orf141Q5JVX7 400 aa12.07□□□□□ -0.48
TRAPPC1-202ENST00000540486 CIAPIN1Q6FI81 312 aa12.07□□□□□ -0.48
TRAPPC1-202ENST00000540486 USP50Q70EL3 339 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC1-202ENST00000540486 RTKN2Q8IZC4 609 aa12.07□□□□□ -0.48
TRAPPC1-202ENST00000540486 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
TRAPPC1-202ENST00000540486 ZBTB1Q9Y2K1 713 aa12.07□□□□□ -0.48
TRAPPC1-202ENST00000540486 KIF7Q2M1P5 1343 aa12.07□□□□□ -0.48
TRAPPC1-202ENST00000540486 NOGQ13253 232 aa12.06□□□□□ -0.48
TRAPPC1-202ENST00000540486 TBC1D9BQ66K14 1250 aa12.06□□□□□ -0.48
TRAPPC1-202ENST00000540486 PANK3Q9H999 370 aa12.06□□□□□ -0.48
TRAPPC1-202ENST00000540486 ZNF277Q9NRM2 450 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC1-202ENST00000540486 TRAF5O00463 557 aa12.05□□□□□ -0.48
TRAPPC1-202ENST00000540486 IARSP41252 1262 aaKnown RBP12.05□□□□□ -0.48
TRAPPC1-202ENST00000540486 EIF4A2Q14240 407 aaKnown RBP12.05□□□□□ -0.48
TRAPPC1-202ENST00000540486 JDP2Q8WYK2 163 aa12.05□□□□□ -0.48
TRAPPC1-202ENST00000540486 SAGE1Q9NXZ1 904 aa12.05□□□□□ -0.48
TRAPPC1-202ENST00000540486 TJP1Q07157 1748 aa12.05□□□□□ -0.48
TRAPPC1-202ENST00000540486 NPHP1O15259 732 aa12.04□□□□□ -0.48
TRAPPC1-202ENST00000540486 CELF2O95319 508 aaKnown RBP12.04□□□□□ -0.48
TRAPPC1-202ENST00000540486 EIF5P55010 431 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms