RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ZNF526Q8TF50 670 aaPredicted RBP10.45□□□□□ -0.74
DDB1-217ENST00000540166 POLKQ9UBT6 870 aa10.45□□□□□ -0.74
DDB1-217ENST00000540166 EIF4A2Q14240 407 aaKnown RBP10.45□□□□□ -0.74
DDB1-217ENST00000540166 SSH1Q8WYL5 1049 aa10.45□□□□□ -0.74
DDB1-217ENST00000540166 TSC1Q92574 1164 aa10.45□□□□□ -0.74
DDB1-217ENST00000540166 CCDC87Q9NVE4 849 aa10.45□□□□□ -0.74
DDB1-217ENST00000540166 BCS1LQ9Y276 419 aa10.45□□□□□ -0.74
DDB1-217ENST00000540166 IPO4Q8TEX9 1081 aaKnown RBP10.45□□□□□ -0.74
DDB1-217ENST00000540166 RBM27Q9P2N5 1060 aaKnown RBP10.45□□□□□ -0.74
DDB1-217ENST00000540166 LOC102724428A0A0B4J2F2 783 aa10.44□□□□□ -0.74
DDB1-217ENST00000540166 FAM177BA6PVY3 158 aa10.44□□□□□ -0.74
DDB1-217ENST00000540166 SIK1P57059 783 aa10.44□□□□□ -0.74
DDB1-217ENST00000540166 ZNF445P59923 1031 aa10.44□□□□□ -0.74
DDB1-217ENST00000540166 COL5A2P05997 1499 aaPredicted RBP10.44□□□□□ -0.74
DDB1-217ENST00000540166 RBM25P49756 843 aaKnown RBP10.44□□□□□ -0.74
DDB1-217ENST00000540166 TMEM57Q8N5G2 664 aa10.44□□□□□ -0.74
DDB1-217ENST00000540166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.44□□□□□ -0.74
DDB1-217ENST00000540166 TRIM27P14373 513 aa10.44□□□□□ -0.74
DDB1-217ENST00000540166 USP31Q70CQ4 1352 aa10.44□□□□□ -0.74
DDB1-217ENST00000540166 TRPM1Q7Z4N2 1603 aa10.44□□□□□ -0.74
DDB1-217ENST00000540166 NOLC1Q14978 699 aaKnown RBP eCLIP10.43□□□□□ -0.743e-6■□□□□ 10.5
DDB1-217ENST00000540166 NLGN1Q8N2Q7 840 aa10.43□□□□□ -0.74
DDB1-217ENST00000540166 ZSCAN20P17040 1043 aaPredicted RBP10.43□□□□□ -0.74
DDB1-217ENST00000540166 FHDC1Q9C0D6 1143 aaPredicted RBP10.43□□□□□ -0.74
DDB1-217ENST00000540166 C1orf115Q9H7X2 142 aa10.43□□□□□ -0.74
DDB1-217ENST00000540166 G3V3G9 751 aa10.43□□□□□ -0.74
DDB1-217ENST00000540166 RABEP1Q15276 862 aa10.43□□□□□ -0.74
DDB1-217ENST00000540166 DCAF8Q5TAQ9 597 aa10.43□□□□□ -0.74
DDB1-217ENST00000540166 LRSAM1Q6UWE0 723 aa10.43□□□□□ -0.74
DDB1-217ENST00000540166 NFATC2IPQ8NCF5 419 aa10.43□□□□□ -0.74
DDB1-217ENST00000540166 NPC1L1Q9UHC9 1359 aa10.43□□□□□ -0.74
DDB1-217ENST00000540166 ARHGAP27Q6ZUM4 889 aa10.42□□□□□ -0.74
DDB1-217ENST00000540166 CWC22Q9HCG8 908 aaKnown RBP10.42□□□□□ -0.74
DDB1-217ENST00000540166 ITSN1Q15811 1721 aa10.42□□□□□ -0.74
DDB1-217ENST00000540166 RTL1A6NKG5 1358 aa10.42□□□□□ -0.74
DDB1-217ENST00000540166 FCHSD2O94868 740 aa10.42□□□□□ -0.74
DDB1-217ENST00000540166 CHMP4AQ9BY43 222 aa10.42□□□□□ -0.74
DDB1-217ENST00000540166 ZNF219Q9P2Y4 722 aaPredicted RBP10.42□□□□□ -0.74
DDB1-217ENST00000540166 PALLDQ8WX93 1383 aa10.42□□□□□ -0.74
DDB1-217ENST00000540166 TMPOP42166 694 aaKnown RBP10.42□□□□□ -0.74
DDB1-217ENST00000540166 PAXIP1Q6ZW49 1069 aaPredicted RBP10.42□□□□□ -0.74
DDB1-217ENST00000540166 ZNF622Q969S3 477 aaKnown RBP eCLIP10.42□□□□□ -0.742e-6■□□□□ 11
DDB1-217ENST00000540166 ZNF830Q96NB3 372 aaPredicted RBP10.42□□□□□ -0.74
DDB1-217ENST00000540166 ERICH4A6NGS2 130 aa10.41□□□□□ -0.74
DDB1-217ENST00000540166 PRKAR2BP31323 418 aa10.41□□□□□ -0.74
DDB1-217ENST00000540166 LMOD3Q0VAK6 560 aa10.41□□□□□ -0.74
DDB1-217ENST00000540166 TEX13AQ9BXU3 409 aaPredicted RBP10.41□□□□□ -0.74
DDB1-217ENST00000540166 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.41□□□□□ -0.74
DDB1-217ENST00000540166 COL14A1Q05707 1796 aaKnown RBP10.41□□□□□ -0.74
DDB1-217ENST00000540166 SETD1AO15047 1707 aaKnown RBP10.41□□□□□ -0.74
DDB1-217ENST00000540166 A0A087WZG4 1122 aa10.41□□□□□ -0.74
DDB1-217ENST00000540166 NSD2O96028 1365 aa10.41□□□□□ -0.74
DDB1-217ENST00000540166 GNAT3A8MTJ3 354 aa10.41□□□□□ -0.74
DDB1-217ENST00000540166 CHD1LQ86WJ1 897 aa10.41□□□□□ -0.74
DDB1-217ENST00000540166 TIGD1Q96MW7 591 aa10.41□□□□□ -0.74
DDB1-217ENST00000540166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.41□□□□□ -0.74
DDB1-217ENST00000540166 ZNF652Q9Y2D9 606 aa10.41□□□□□ -0.74
DDB1-217ENST00000540166 CAMTA1Q9Y6Y1 1673 aa10.41□□□□□ -0.74
DDB1-217ENST00000540166 CT47B1P0C2W7 299 aaPredicted RBP10.4□□□□□ -0.74
DDB1-217ENST00000540166 AEBP1Q8IUX7 1158 aa10.4□□□□□ -0.74
DDB1-217ENST00000540166 ZNF592Q92610 1267 aa10.4□□□□□ -0.74
DDB1-217ENST00000540166 DNAJC2Q99543 621 aaKnown RBP10.4□□□□□ -0.74
DDB1-217ENST00000540166 KNDC1Q76NI1 1749 aa10.4□□□□□ -0.74
DDB1-217ENST00000540166 ERVV-2B6SEH9 535 aa10.4□□□□□ -0.74
DDB1-217ENST00000540166 CDC45O75419 566 aa10.4□□□□□ -0.74
DDB1-217ENST00000540166 NOL8Q76FK4 1167 aaKnown RBP10.4□□□□□ -0.74
DDB1-217ENST00000540166 BTBD11A6QL63 1104 aa10.4□□□□□ -0.74
DDB1-217ENST00000540166 U2AF2P26368 475 aaKnown RBP eCLIP10.4□□□□□ -0.749e-11■■■■■ 32.2
DDB1-217ENST00000540166 ADGRB2O60241 1585 aa10.4□□□□□ -0.75
DDB1-217ENST00000540166 PHKG2P15735 406 aa10.39□□□□□ -0.75
DDB1-217ENST00000540166 EIF2S2P20042 333 aaKnown RBP10.39□□□□□ -0.75
DDB1-217ENST00000540166 AKAP4Q5JQC9 854 aa10.39□□□□□ -0.75
DDB1-217ENST00000540166 CALCOCO1Q9P1Z2 691 aa10.39□□□□□ -0.75
DDB1-217ENST00000540166 ASAP1Q9ULH1 1129 aa10.39□□□□□ -0.75
DDB1-217ENST00000540166 QRICH2Q9H0J4 1663 aa10.39□□□□□ -0.75
DDB1-217ENST00000540166 FAM184AQ8NB25 1140 aa10.39□□□□□ -0.75
DDB1-217ENST00000540166 IFT57Q9NWB7 429 aa10.39□□□□□ -0.75
DDB1-217ENST00000540166 USP25Q9UHP3 1055 aa10.39□□□□□ -0.75
DDB1-217ENST00000540166 IFT172Q9UG01 1749 aa10.39□□□□□ -0.75
DDB1-217ENST00000540166 TPM3P06753 285 aa10.39□□□□□ -0.75
DDB1-217ENST00000540166 TTC12Q9H892 705 aaPredicted RBP10.39□□□□□ -0.75
DDB1-217ENST00000540166 IBTKQ9P2D0 1353 aaPredicted RBP10.39□□□□□ -0.75
DDB1-217ENST00000540166 SLC39A6Q13433 755 aa10.39□□□□□ -0.75
DDB1-217ENST00000540166 KIF6Q6ZMV9 814 aa10.39□□□□□ -0.75
DDB1-217ENST00000540166 PIGBQ92521 554 aa10.39□□□□□ -0.75
DDB1-217ENST00000540166 FEZ1Q99689 392 aa10.39□□□□□ -0.75
DDB1-217ENST00000540166 GPBP1L1Q9HC44 474 aaPredicted RBP10.39□□□□□ -0.75
DDB1-217ENST00000540166 MMP10P09238 476 aa10.38□□□□□ -0.75
DDB1-217ENST00000540166 MCCP23508 829 aa10.38□□□□□ -0.75
DDB1-217ENST00000540166 PTF1AQ7RTS3 328 aa10.38□□□□□ -0.75
DDB1-217ENST00000540166 FMNL2Q96PY5 1086 aa10.38□□□□□ -0.75
DDB1-217ENST00000540166 SYT17Q9BSW7 474 aa10.38□□□□□ -0.75
DDB1-217ENST00000540166 HDAC1Q13547 482 aaPredicted RBP10.38□□□□□ -0.75
DDB1-217ENST00000540166 TRERF1Q96PN7 1200 aa10.38□□□□□ -0.75
DDB1-217ENST00000540166 IRX3P78415 501 aaPredicted RBP10.38□□□□□ -0.75
DDB1-217ENST00000540166 SPC24Q8NBT2 197 aa10.38□□□□□ -0.75
DDB1-217ENST00000540166 BCL2L12Q9HB09 334 aa10.38□□□□□ -0.75
DDB1-217ENST00000540166 KIF24Q5T7B8 1368 aa10.37□□□□□ -0.75
DDB1-217ENST00000540166 CCDC27Q2M243 656 aa10.37□□□□□ -0.75
DDB1-217ENST00000540166 OGFRQ9NZT2 677 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms