RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PPFIA3O75145 1194 aa16.48■□□□□ 0.23
BNIP3-202ENST00000540159 FAM173BQ6P4H8 233 aa16.48■□□□□ 0.23
BNIP3-202ENST00000540159 FAM208AQ9UK61 1670 aaKnown RBP16.48■□□□□ 0.23
BNIP3-202ENST00000540159 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.47■□□□□ 0.23
BNIP3-202ENST00000540159 GIGYF1O75420 1035 aaPredicted RBP16.47■□□□□ 0.23
BNIP3-202ENST00000540159 CUL4AQ13619 759 aa16.47■□□□□ 0.23
BNIP3-202ENST00000540159 AKAP4Q5JQC9 854 aa16.47■□□□□ 0.23
BNIP3-202ENST00000540159 TAF6LQ9Y6J9 622 aa16.47■□□□□ 0.23
BNIP3-202ENST00000540159 RAD50Q92878 1312 aa16.47■□□□□ 0.23
BNIP3-202ENST00000540159 RIC3Q7Z5B4 369 aa16.47■□□□□ 0.23
BNIP3-202ENST00000540159 XRN1Q8IZH2 1706 aaKnown RBP16.47■□□□□ 0.23
BNIP3-202ENST00000540159 RAB11FIP3O75154 756 aa16.47■□□□□ 0.23
BNIP3-202ENST00000540159 PRKCSHP14314 528 aaPredicted RBP16.47■□□□□ 0.23
BNIP3-202ENST00000540159 STK3Q13188 491 aa16.47■□□□□ 0.23
BNIP3-202ENST00000540159 CHRNA2Q15822 529 aa16.47■□□□□ 0.23
BNIP3-202ENST00000540159 LRSAM1Q6UWE0 723 aa16.47■□□□□ 0.23
BNIP3-202ENST00000540159 ZNF830Q96NB3 372 aaPredicted RBP16.47■□□□□ 0.23
BNIP3-202ENST00000540159 RGPD2P0DJD1 1756 aa16.46■□□□□ 0.23
BNIP3-202ENST00000540159 PTMAP06454 111 aaKnown RBP16.46■□□□□ 0.23
BNIP3-202ENST00000540159 MCM2P49736 904 aa16.46■□□□□ 0.23
BNIP3-202ENST00000540159 ZSCAN30Q86W11 494 aa16.46■□□□□ 0.23
BNIP3-202ENST00000540159 NFATC2IPQ8NCF5 419 aa16.46■□□□□ 0.23
BNIP3-202ENST00000540159 SMC3Q9UQE7 1217 aa16.46■□□□□ 0.23
BNIP3-202ENST00000540159 CEMIPQ8WUJ3 1361 aa16.46■□□□□ 0.22
BNIP3-202ENST00000540159 EAF2Q96CJ1 260 aaPredicted RBP16.45■□□□□ 0.22
BNIP3-202ENST00000540159 ATP5J2-PTCD1G3V325 749 aa16.45■□□□□ 0.22
BNIP3-202ENST00000540159 PTCD1O75127 700 aaKnown RBP16.45■□□□□ 0.22
BNIP3-202ENST00000540159 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
BNIP3-202ENST00000540159 SYT1P21579 422 aa16.45■□□□□ 0.22
BNIP3-202ENST00000540159 ANAPC15P60006 121 aa16.45■□□□□ 0.22
BNIP3-202ENST00000540159 PPP1R9BQ96SB3 815 aa16.45■□□□□ 0.22
BNIP3-202ENST00000540159 ECHDC1Q9NTX5 307 aa16.44■□□□□ 0.22
BNIP3-202ENST00000540159 R3HCC1Q9Y3T6 440 aaKnown RBP16.44■□□□□ 0.22
BNIP3-202ENST00000540159 GLRX3O76003 335 aaKnown RBP16.44■□□□□ 0.22
BNIP3-202ENST00000540159 FOSBP53539 338 aa16.44■□□□□ 0.22
BNIP3-202ENST00000540159 MYD88Q99836 296 aa16.44■□□□□ 0.22
BNIP3-202ENST00000540159 SASH1O94885 1247 aa16.43■□□□□ 0.22
BNIP3-202ENST00000540159 GJB2P29033 226 aa16.43■□□□□ 0.22
BNIP3-202ENST00000540159 DNM1Q05193 864 aaKnown RBP16.43■□□□□ 0.22
BNIP3-202ENST00000540159 G3BP1Q13283 466 aaKnown RBP eCLIP16.43■□□□□ 0.22
BNIP3-202ENST00000540159 KSR2Q6VAB6 950 aa16.43■□□□□ 0.22
BNIP3-202ENST00000540159 KAZALD1Q96I82 304 aa16.43■□□□□ 0.22
BNIP3-202ENST00000540159 ARHGAP23Q9P227 1491 aa16.43■□□□□ 0.22
BNIP3-202ENST00000540159 RBM10P98175 930 aaKnown RBP16.43■□□□□ 0.22
BNIP3-202ENST00000540159 NMIQ13287 307 aaPredicted RBP16.43■□□□□ 0.22
BNIP3-202ENST00000540159 SLFNL1Q499Z3 407 aa16.43■□□□□ 0.22
BNIP3-202ENST00000540159 EPHA10Q5JZY3 1008 aa16.43■□□□□ 0.22
BNIP3-202ENST00000540159 FSD1Q9BTV5 496 aa16.43■□□□□ 0.22
BNIP3-202ENST00000540159 TAOK2Q9UL54 1235 aa16.43■□□□□ 0.22
BNIP3-202ENST00000540159 GRM8O00222 908 aa16.42■□□□□ 0.22
BNIP3-202ENST00000540159 COPS6Q7L5N1 327 aa16.42■□□□□ 0.22
BNIP3-202ENST00000540159 KCNH5Q8NCM2 988 aa16.42■□□□□ 0.22
BNIP3-202ENST00000540159 PDRG1Q9NUG6 133 aa16.42■□□□□ 0.22
BNIP3-202ENST00000540159 LTN1O94822 1766 aa16.42■□□□□ 0.22
BNIP3-202ENST00000540159 WDR33Q9C0J8 1336 aaKnown RBP16.42■□□□□ 0.22
BNIP3-202ENST00000540159 RPAP1Q9BWH6 1393 aaPredicted RBP16.42■□□□□ 0.22
BNIP3-202ENST00000540159 STX6O43752 255 aa16.42■□□□□ 0.22
BNIP3-202ENST00000540159 HCLS1P14317 486 aaPredicted RBP16.42■□□□□ 0.22
BNIP3-202ENST00000540159 ARHGEF25Q86VW2 580 aa16.42■□□□□ 0.22
BNIP3-202ENST00000540159 XAGE3Q8WTP9 111 aa16.42■□□□□ 0.22
BNIP3-202ENST00000540159 USP25Q9UHP3 1055 aa16.42■□□□□ 0.22
BNIP3-202ENST00000540159 LIMCH1Q9UPQ0 1083 aa16.42■□□□□ 0.22
BNIP3-202ENST00000540159 SLIT1O75093 1534 aa16.42■□□□□ 0.22
BNIP3-202ENST00000540159 A0A0D9SFI3 127 aa16.42■□□□□ 0.22
BNIP3-202ENST00000540159 TSPY26PQ9H489 355 aa16.42■□□□□ 0.22
BNIP3-202ENST00000540159 RBM8AQ9Y5S9 174 aaKnown RBP16.42■□□□□ 0.22
BNIP3-202ENST00000540159 MBD3O95983 291 aa16.41■□□□□ 0.22
BNIP3-202ENST00000540159 GIMAP6Q6P9H5 292 aa16.41■□□□□ 0.22
BNIP3-202ENST00000540159 KRT28Q7Z3Y7 464 aa16.41■□□□□ 0.22
BNIP3-202ENST00000540159 INTS4Q96HW7 963 aaKnown RBP16.41■□□□□ 0.22
BNIP3-202ENST00000540159 TTC14Q96N46 770 aa16.41■□□□□ 0.22
BNIP3-202ENST00000540159 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
BNIP3-202ENST00000540159 IGKV5-2P06315 115 aa16.4■□□□□ 0.22
BNIP3-202ENST00000540159 PROSER2Q86WR7 435 aaPredicted RBP16.4■□□□□ 0.22
BNIP3-202ENST00000540159 C17orf53Q8N3J3 647 aaPredicted RBP16.4■□□□□ 0.22
BNIP3-202ENST00000540159 DNAJC2Q99543 621 aaKnown RBP16.4■□□□□ 0.22
BNIP3-202ENST00000540159 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
BNIP3-202ENST00000540159 ME3Q16798 604 aa16.4■□□□□ 0.22
BNIP3-202ENST00000540159 CCDC129Q6ZRS4 1044 aa16.4■□□□□ 0.22
BNIP3-202ENST00000540159 LRRC2Q9BYS8 371 aa16.4■□□□□ 0.22
BNIP3-202ENST00000540159 ZSCAN22P10073 491 aaPredicted RBP16.39■□□□□ 0.22
BNIP3-202ENST00000540159 HSP90AB4PQ58FF6 505 aa16.39■□□□□ 0.22
BNIP3-202ENST00000540159 ZNF589Q86UQ0 364 aaPredicted RBP16.39■□□□□ 0.22
BNIP3-202ENST00000540159 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.22
BNIP3-202ENST00000540159 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.39■□□□□ 0.22
BNIP3-202ENST00000540159 ANKARQ7Z5J8 1434 aa16.39■□□□□ 0.21
BNIP3-202ENST00000540159 UBE3BQ7Z3V4 1068 aa16.39■□□□□ 0.21
BNIP3-202ENST00000540159 ZNF496Q96IT1 587 aaPredicted RBP16.39■□□□□ 0.21
BNIP3-202ENST00000540159 HYPKQ9NX55 129 aa16.39■□□□□ 0.21
BNIP3-202ENST00000540159 FER1L4A9Z1Z3 1794 aa16.39■□□□□ 0.21
BNIP3-202ENST00000540159 GPATCH3Q96I76 525 aa16.39■□□□□ 0.21
BNIP3-202ENST00000540159 SEC62Q99442 399 aaKnown RBP16.39■□□□□ 0.21
BNIP3-202ENST00000540159 MARF1Q9Y4F3 1742 aaKnown RBP16.38■□□□□ 0.21
BNIP3-202ENST00000540159 CAMK4Q16566 473 aa16.38■□□□□ 0.21
BNIP3-202ENST00000540159 CYP46A1Q9Y6A2 500 aa16.38■□□□□ 0.21
BNIP3-202ENST00000540159 ZNF790Q6PG37 636 aa16.38■□□□□ 0.21
BNIP3-202ENST00000540159 BABAM1Q9NWV8 329 aa16.38■□□□□ 0.21
BNIP3-202ENST00000540159 TPCN1Q9ULQ1 816 aa16.38■□□□□ 0.21
BNIP3-202ENST00000540159 LRRC37A3O60309 1634 aa16.38■□□□□ 0.21
BNIP3-202ENST00000540159 AMOTQ4VCS5 1084 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms