RNA–Protein interactions for RNA: ENST00000539699.5

DDX11-215, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-215ENST00000539699 SLX4Q8IY92 1834 aa22.11■■□□□ 1.13
DDX11-215ENST00000539699 COL3A1P02461 1466 aaPredicted RBP22.11■■□□□ 1.13
DDX11-215ENST00000539699 ST5P78524 1137 aa22.11■■□□□ 1.13
DDX11-215ENST00000539699 MASTLQ96GX5 879 aa22.11■■□□□ 1.13
DDX11-215ENST00000539699 SOGA3Q5TF21 947 aa22.1■■□□□ 1.13
DDX11-215ENST00000539699 CEMIPQ8WUJ3 1361 aa22.1■■□□□ 1.13
DDX11-215ENST00000539699 KCNQ3O43525 872 aa22.09■■□□□ 1.13
DDX11-215ENST00000539699 DZIP3Q86Y13 1208 aaKnown RBP22.09■■□□□ 1.13
DDX11-215ENST00000539699 MKRN1Q9UHC7 482 aaKnown RBP22.09■■□□□ 1.13
DDX11-215ENST00000539699 BTBD11A6QL63 1104 aa22.08■■□□□ 1.13
DDX11-215ENST00000539699 C7orf43Q8WVR3 580 aa22.07■■□□□ 1.12
DDX11-215ENST00000539699 USP16Q9Y5T5 823 aa22.07■■□□□ 1.12
DDX11-215ENST00000539699 IQCA1LA6NCM1 817 aa22.06■■□□□ 1.12
DDX11-215ENST00000539699 CLEC4GQ6UXB4 293 aa22.06■■□□□ 1.12
DDX11-215ENST00000539699 L3MBTL3Q96JM7 780 aaPredicted RBP22.06■■□□□ 1.12
DDX11-215ENST00000539699 CACNA1SQ13698 1873 aa22.06■■□□□ 1.12
DDX11-215ENST00000539699 BCORQ6W2J9 1755 aa22.05■■□□□ 1.12
DDX11-215ENST00000539699 ARFGEF2Q9Y6D5 1785 aa22.05■■□□□ 1.12
DDX11-215ENST00000539699 NPC1L1Q9UHC9 1359 aa22.05■■□□□ 1.12
DDX11-215ENST00000539699 NBPF5PQ86XG9 351 aaPredicted RBP22.05■■□□□ 1.12
DDX11-215ENST00000539699 CCER1Q8TC90 406 aaPredicted RBP22.05■■□□□ 1.12
DDX11-215ENST00000539699 PHACTR3Q96KR7 559 aa22.05■■□□□ 1.12
DDX11-215ENST00000539699 PASKQ96RG2 1323 aa22.05■■□□□ 1.12
DDX11-215ENST00000539699 PIP4K2AP48426 406 aaPredicted RBP22.04■■□□□ 1.12
DDX11-215ENST00000539699 CNGB1Q14028 1251 aaPredicted RBP22.04■■□□□ 1.12
DDX11-215ENST00000539699 LDHDQ86WU2 507 aa22.04■■□□□ 1.12
DDX11-215ENST00000539699 TAF1DQ9H5J8 278 aaPredicted RBP22.04■■□□□ 1.12
DDX11-215ENST00000539699 CNTNAP1P78357 1384 aa22.03■■□□□ 1.12
DDX11-215ENST00000539699 NPR1P16066 1061 aa22.03■■□□□ 1.12
DDX11-215ENST00000539699 CCDC93Q567U6 631 aa22.03■■□□□ 1.12
DDX11-215ENST00000539699 SCN4AP35499 1836 aa22.02■■□□□ 1.12
DDX11-215ENST00000539699 PRAMEF22A3QJZ6 481 aa22.02■■□□□ 1.12
DDX11-215ENST00000539699 KLRG2A4D1S0 409 aaPredicted RBP22.02■■□□□ 1.12
DDX11-215ENST00000539699 ZNF652Q9Y2D9 606 aa22.02■■□□□ 1.12
DDX11-215ENST00000539699 FOXN1O15353 648 aa22.01■■□□□ 1.11
DDX11-215ENST00000539699 PRKAR2BP31323 418 aa22.01■■□□□ 1.11
DDX11-215ENST00000539699 FKBP4Q02790 459 aaKnown RBP eCLIP22.01■■□□□ 1.11
DDX11-215ENST00000539699 SNRPA1P09661 255 aaKnown RBP22■■□□□ 1.11
DDX11-215ENST00000539699 TPTE2Q6XPS3 522 aa22■■□□□ 1.11
DDX11-215ENST00000539699 RSPH6AQ9H0K4 717 aa22■■□□□ 1.11
DDX11-215ENST00000539699 ITGBL1O95965 494 aaPredicted RBP21.99■■□□□ 1.11
DDX11-215ENST00000539699 ZNF277Q9NRM2 450 aaPredicted RBP21.99■■□□□ 1.11
DDX11-215ENST00000539699 TMEM88BA6NKF7 163 aa21.98■■□□□ 1.11
DDX11-215ENST00000539699 OLFM4Q6UX06 510 aa21.98■■□□□ 1.11
DDX11-215ENST00000539699 NIP7Q9Y221 180 aaKnown RBP eCLIP21.98■■□□□ 1.11
DDX11-215ENST00000539699 ZNF541Q9H0D2 1346 aa21.98■■□□□ 1.11
DDX11-215ENST00000539699 RGL2O15211 777 aa21.97■■□□□ 1.11
DDX11-215ENST00000539699 VEGFBP49765 207 aa21.97■■□□□ 1.11
DDX11-215ENST00000539699 EAPPQ56P03 285 aaPredicted RBP21.97■■□□□ 1.11
DDX11-215ENST00000539699 MCM10Q7L590 875 aa21.97■■□□□ 1.11
DDX11-215ENST00000539699 RTKN2Q8IZC4 609 aa21.97■■□□□ 1.11
DDX11-215ENST00000539699 PRDM10Q9NQV6 1147 aa21.97■■□□□ 1.11
DDX11-215ENST00000539699 HACL1Q9UJ83 578 aa21.97■■□□□ 1.11
DDX11-215ENST00000539699 NBPF26B4DH59 902 aa21.96■■□□□ 1.11
DDX11-215ENST00000539699 NBPF10Q6P3W6 841 aaKnown RBP21.96■■□□□ 1.11
DDX11-215ENST00000539699 NBPF15Q8N660 670 aa21.96■■□□□ 1.11
DDX11-215ENST00000539699 RTF1Q92541 710 aaKnown RBP21.96■■□□□ 1.11
DDX11-215ENST00000539699 CFAP53Q96M91 514 aa21.96■■□□□ 1.11
DDX11-215ENST00000539699 EPHX2P34913 555 aa21.95■■□□□ 1.1
DDX11-215ENST00000539699 CLEC11AQ9Y240 323 aa21.95■■□□□ 1.1
DDX11-215ENST00000539699 FAM177BA6PVY3 158 aa21.94■■□□□ 1.1
DDX11-215ENST00000539699 FZD9O00144 591 aa21.94■■□□□ 1.1
DDX11-215ENST00000539699 ALDH1B1P30837 517 aa21.94■■□□□ 1.1
DDX11-215ENST00000539699 CTCFP49711 727 aaPredicted RBP21.94■■□□□ 1.1
DDX11-215ENST00000539699 PNMA8AQ86V59 439 aaPredicted RBP21.94■■□□□ 1.1
DDX11-215ENST00000539699 AIDAQ96BJ3 306 aa21.94■■□□□ 1.1
DDX11-215ENST00000539699 IARSP41252 1262 aaKnown RBP21.93■■□□□ 1.1
DDX11-215ENST00000539699 HLFQ16534 295 aa21.93■■□□□ 1.1
DDX11-215ENST00000539699 SYNE4Q8N205 404 aa21.93■■□□□ 1.1
DDX11-215ENST00000539699 NUDCQ9Y266 331 aa21.93■■□□□ 1.1
DDX11-215ENST00000539699 ADAMTSL1Q8N6G6 1762 aa21.92■■□□□ 1.1
DDX11-215ENST00000539699 RNF123Q5XPI4 1314 aa21.92■■□□□ 1.1
DDX11-215ENST00000539699 WBP1LQ9NX94 342 aa21.92■■□□□ 1.1
DDX11-215ENST00000539699 U2AF1L5P0DN76 240 aaPredicted RBP21.91■■□□□ 1.1
DDX11-215ENST00000539699 GTF2E1P29083 439 aaPredicted RBP21.91■■□□□ 1.1
DDX11-215ENST00000539699 U2AF1Q01081 240 aaKnown RBP eCLIP21.91■■□□□ 1.1
DDX11-215ENST00000539699 DCTN1Q14203 1278 aa21.91■■□□□ 1.1
DDX11-215ENST00000539699 CNTROBQ8N137 903 aa21.91■■□□□ 1.1
DDX11-215ENST00000539699 GPC2Q8N158 579 aa21.91■■□□□ 1.1
DDX11-215ENST00000539699 HTATSF1O43719 755 aaKnown RBP21.9■■□□□ 1.1
DDX11-215ENST00000539699 MAP1SQ66K74 1059 aaPredicted RBP21.9■■□□□ 1.1
DDX11-215ENST00000539699 RASSF10A6NK89 507 aa21.89■■□□□ 1.09
DDX11-215ENST00000539699 DEFB115Q30KQ5 88 aa21.89■■□□□ 1.09
DDX11-215ENST00000539699 CRY2Q49AN0 593 aa21.89■■□□□ 1.09
DDX11-215ENST00000539699 PSMD1Q99460 953 aa21.89■■□□□ 1.09
DDX11-215ENST00000539699 SNED1Q8TER0 1413 aa21.89■■□□□ 1.09
DDX11-215ENST00000539699 TAF7Q15545 349 aaPredicted RBP21.88■■□□□ 1.09
DDX11-215ENST00000539699 JDP2Q8WYK2 163 aa21.88■■□□□ 1.09
DDX11-215ENST00000539699 LBX1P52954 281 aa21.87■■□□□ 1.09
DDX11-215ENST00000539699 NYXQ9GZU5 481 aa21.87■■□□□ 1.09
DDX11-215ENST00000539699 CC2D2BQ6DHV5 1058 aa21.86■■□□□ 1.09
DDX11-215ENST00000539699 NUTM1Q86Y26 1132 aa21.86■■□□□ 1.09
DDX11-215ENST00000539699 MIS18AQ9NYP9 233 aa21.86■■□□□ 1.09
DDX11-215ENST00000539699 ERVV-1B6SEH8 477 aa21.85■■□□□ 1.09
DDX11-215ENST00000539699 ABCC12Q96J65 1359 aa21.85■■□□□ 1.09
DDX11-215ENST00000539699 WDR33Q9C0J8 1336 aaKnown RBP21.84■■□□□ 1.09
DDX11-215ENST00000539699 PPP2R1AP30153 589 aa21.84■■□□□ 1.09
DDX11-215ENST00000539699 EIF6P56537 245 aaKnown RBP21.84■■□□□ 1.09
DDX11-215ENST00000539699 NGEFQ8N5V2 710 aa21.84■■□□□ 1.09
DDX11-215ENST00000539699 DDX21Q9NR30 783 aaKnown RBP eCLIP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms