RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 POLD1P28340 1107 aa16.37■□□□□ 0.21
TSPAN9-207ENST00000539631 AIMP1Q12904 312 aaKnown RBP16.37■□□□□ 0.21
TSPAN9-207ENST00000539631 COPS6Q7L5N1 327 aa16.37■□□□□ 0.21
TSPAN9-207ENST00000539631 XAGE3Q8WTP9 111 aa16.37■□□□□ 0.21
TSPAN9-207ENST00000539631 AFDNP55196 1824 aaKnown RBP16.36■□□□□ 0.21
TSPAN9-207ENST00000539631 MMP10P09238 476 aa16.36■□□□□ 0.21
TSPAN9-207ENST00000539631 YY1P25490 414 aa16.36■□□□□ 0.21
TSPAN9-207ENST00000539631 HLFQ16534 295 aa16.36■□□□□ 0.21
TSPAN9-207ENST00000539631 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
TSPAN9-207ENST00000539631 CHMP4AQ9BY43 222 aa16.36■□□□□ 0.21
TSPAN9-207ENST00000539631 ZBTB3Q9H5J0 574 aa16.36■□□□□ 0.21
TSPAN9-207ENST00000539631 PHAXQ9H814 394 aaKnown RBP16.36■□□□□ 0.21
TSPAN9-207ENST00000539631 HYPKQ9NX55 129 aa16.36■□□□□ 0.21
TSPAN9-207ENST00000539631 MAP3K15Q6ZN16 1313 aa16.36■□□□□ 0.21
TSPAN9-207ENST00000539631 ANKRD36CQ5JPF3 1778 aa16.36■□□□□ 0.21
TSPAN9-207ENST00000539631 ARFGEF2Q9Y6D5 1785 aa16.36■□□□□ 0.21
TSPAN9-207ENST00000539631 TM4SF1P30408 202 aa16.35■□□□□ 0.21
TSPAN9-207ENST00000539631 TBC1D9BQ66K14 1250 aa16.35■□□□□ 0.21
TSPAN9-207ENST00000539631 STK31Q9BXU1 1019 aa16.35■□□□□ 0.21
TSPAN9-207ENST00000539631 ERVV-1B6SEH8 477 aa16.34■□□□□ 0.21
TSPAN9-207ENST00000539631 DDR1Q08345 913 aa16.34■□□□□ 0.21
TSPAN9-207ENST00000539631 NFIXQ14938 502 aa16.34■□□□□ 0.21
TSPAN9-207ENST00000539631 BICDL1Q6ZP65 573 aa16.34■□□□□ 0.21
TSPAN9-207ENST00000539631 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
TSPAN9-207ENST00000539631 PPP1R1BQ9UD71 204 aaPredicted RBP16.33■□□□□ 0.2
TSPAN9-207ENST00000539631 ZNF652Q9Y2D9 606 aa16.33■□□□□ 0.2
TSPAN9-207ENST00000539631 NRXN2Q9P2S2 1712 aa16.33■□□□□ 0.2
TSPAN9-207ENST00000539631 POLRMTO00411 1230 aaKnown RBP16.32■□□□□ 0.2
TSPAN9-207ENST00000539631 CLEC4GQ6UXB4 293 aa16.32■□□□□ 0.2
TSPAN9-207ENST00000539631 G2E3Q7L622 706 aa16.32■□□□□ 0.2
TSPAN9-207ENST00000539631 YTHDC1Q96MU7 727 aaKnown RBP16.32■□□□□ 0.2
TSPAN9-207ENST00000539631 PARP3Q9Y6F1 533 aa16.32■□□□□ 0.2
TSPAN9-207ENST00000539631 RGL2O15211 777 aa16.31■□□□□ 0.2
TSPAN9-207ENST00000539631 GIGYF2Q6Y7W6 1299 aaKnown RBP16.31■□□□□ 0.2
TSPAN9-207ENST00000539631 ANKRD13DQ6ZTN6 518 aa16.31■□□□□ 0.2
TSPAN9-207ENST00000539631 KIF13BQ9NQT8 1826 aa16.31■□□□□ 0.2
TSPAN9-207ENST00000539631 PLBD2Q8NHP8 589 aa16.3■□□□□ 0.2
TSPAN9-207ENST00000539631 NIP7Q9Y221 180 aaKnown RBP eCLIP16.3■□□□□ 0.2
TSPAN9-207ENST00000539631 SERPINB2P05120 415 aa16.29■□□□□ 0.2
TSPAN9-207ENST00000539631 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
TSPAN9-207ENST00000539631 SETDB2Q96T68 719 aa16.29■□□□□ 0.2
TSPAN9-207ENST00000539631 ATP10DQ9P241 1426 aa16.28■□□□□ 0.2
TSPAN9-207ENST00000539631 CARMIL3Q8ND23 1372 aa16.28■□□□□ 0.2
TSPAN9-207ENST00000539631 CT47B1P0C2W7 299 aaPredicted RBP16.28■□□□□ 0.2
TSPAN9-207ENST00000539631 GPTP24298 496 aa16.28■□□□□ 0.2
TSPAN9-207ENST00000539631 FLIIQ13045 1269 aa16.28■□□□□ 0.2
TSPAN9-207ENST00000539631 RIC3Q7Z5B4 369 aa16.28■□□□□ 0.2
TSPAN9-207ENST00000539631 ZNF34Q8IZ26 560 aa16.28■□□□□ 0.2
TSPAN9-207ENST00000539631 MRPL50Q8N5N7 158 aaKnown RBP16.28■□□□□ 0.2
TSPAN9-207ENST00000539631 SSH1Q8WYL5 1049 aa16.28■□□□□ 0.2
TSPAN9-207ENST00000539631 FHDC1Q9C0D6 1143 aaPredicted RBP16.28■□□□□ 0.2
TSPAN9-207ENST00000539631 ANKRD31Q8N7Z5 1873 aa16.27■□□□□ 0.2
TSPAN9-207ENST00000539631 UBN2Q6ZU65 1347 aa16.27■□□□□ 0.2
TSPAN9-207ENST00000539631 FAM177BA6PVY3 158 aa16.27■□□□□ 0.2
TSPAN9-207ENST00000539631 DDX58O95786 925 aaKnown RBP16.27■□□□□ 0.2
TSPAN9-207ENST00000539631 TCIRG1Q13488 830 aa16.27■□□□□ 0.2
TSPAN9-207ENST00000539631 ALDH1L2Q3SY69 923 aa16.27■□□□□ 0.2
TSPAN9-207ENST00000539631 ZNF428Q96B54 188 aa16.27■□□□□ 0.2
TSPAN9-207ENST00000539631 BCL2L13Q9BXK5 485 aa16.27■□□□□ 0.2
TSPAN9-207ENST00000539631 KIAA1551Q9HCM1 1747 aa16.27■□□□□ 0.19
TSPAN9-207ENST00000539631 ADCY9O60503 1353 aa16.26■□□□□ 0.19
TSPAN9-207ENST00000539631 N4BP2Q86UW6 1770 aaPredicted RBP16.26■□□□□ 0.19
TSPAN9-207ENST00000539631 HSP90AB3PQ58FF7 597 aa16.26■□□□□ 0.19
TSPAN9-207ENST00000539631 MAP3K2Q9Y2U5 619 aa16.26■□□□□ 0.19
TSPAN9-207ENST00000539631 C10orf71Q711Q0 1435 aa16.26■□□□□ 0.19
TSPAN9-207ENST00000539631 PI4KAP2A4QPH2 592 aa16.25■□□□□ 0.19
TSPAN9-207ENST00000539631 FKBP5Q13451 457 aaPredicted RBP16.25■□□□□ 0.19
TSPAN9-207ENST00000539631 KSR2Q6VAB6 950 aa16.25■□□□□ 0.19
TSPAN9-207ENST00000539631 CCDC24Q8N4L8 307 aa16.25■□□□□ 0.19
TSPAN9-207ENST00000539631 PI4KAP1Q8N8J0 262 aa16.25■□□□□ 0.19
TSPAN9-207ENST00000539631 MYD88Q99836 296 aa16.25■□□□□ 0.19
TSPAN9-207ENST00000539631 SMC4Q9NTJ3 1288 aa16.25■□□□□ 0.19
TSPAN9-207ENST00000539631 ATP5J2-PTCD1G3V325 749 aa16.24■□□□□ 0.19
TSPAN9-207ENST00000539631 RARSP54136 660 aaKnown RBP16.24■□□□□ 0.19
TSPAN9-207ENST00000539631 SUSD4Q5VX71 490 aa16.24■□□□□ 0.19
TSPAN9-207ENST00000539631 PRR5LQ6MZQ0 368 aa16.24■□□□□ 0.19
TSPAN9-207ENST00000539631 NBPF5PQ86XG9 351 aaPredicted RBP16.24■□□□□ 0.19
TSPAN9-207ENST00000539631 SYT17Q9BSW7 474 aa16.24■□□□□ 0.19
TSPAN9-207ENST00000539631 ISCA1Q9BUE6 129 aa16.24■□□□□ 0.19
TSPAN9-207ENST00000539631 CD2APQ9Y5K6 639 aa16.24■□□□□ 0.19
TSPAN9-207ENST00000539631 NLRP10Q86W26 655 aa16.23■□□□□ 0.19
TSPAN9-207ENST00000539631 CNBD1Q8NA66 436 aa16.23■□□□□ 0.19
TSPAN9-207ENST00000539631 NLGN2Q8NFZ4 835 aa16.23■□□□□ 0.19
TSPAN9-207ENST00000539631 METTL22Q9BUU2 404 aaPredicted RBP16.23■□□□□ 0.19
TSPAN9-207ENST00000539631 NPHP1O15259 732 aa16.22■□□□□ 0.19
TSPAN9-207ENST00000539631 PARP10Q53GL7 1025 aa16.22■□□□□ 0.19
TSPAN9-207ENST00000539631 TPTE2Q6XPS3 522 aa16.22■□□□□ 0.19
TSPAN9-207ENST00000539631 F6X3S4 739 aa16.21■□□□□ 0.19
TSPAN9-207ENST00000539631 NTSR2O95665 410 aa16.21■□□□□ 0.19
TSPAN9-207ENST00000539631 PPP1R42Q7Z4L9 355 aa16.21■□□□□ 0.19
TSPAN9-207ENST00000539631 NUTM1Q86Y26 1132 aa16.21■□□□□ 0.19
TSPAN9-207ENST00000539631 DNAAF4Q8WXU2 420 aa16.21■□□□□ 0.19
TSPAN9-207ENST00000539631 NYXQ9GZU5 481 aa16.21■□□□□ 0.19
TSPAN9-207ENST00000539631 IBTKQ9P2D0 1353 aaPredicted RBP16.21■□□□□ 0.19
TSPAN9-207ENST00000539631 TNRC6CQ9HCJ0 1690 aaKnown RBP16.21■□□□□ 0.18
TSPAN9-207ENST00000539631 COL11A2P13942 1736 aaPredicted RBP16.2■□□□□ 0.18
TSPAN9-207ENST00000539631 BCAR3O75815 825 aa16.2■□□□□ 0.18
TSPAN9-207ENST00000539631 IGKV5-2P06315 115 aa16.2■□□□□ 0.18
TSPAN9-207ENST00000539631 GTF2E1P29083 439 aaPredicted RBP16.2■□□□□ 0.18
TSPAN9-207ENST00000539631 ST5P78524 1137 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms