RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 GNB5O14775 395 aa11.8□□□□□ -0.52
CCDC7-209ENST00000539197 DGKGP49619 791 aa11.8□□□□□ -0.52
CCDC7-209ENST00000539197 CHSY3Q70JA7 882 aa11.8□□□□□ -0.52
CCDC7-209ENST00000539197 OGFOD1Q8N543 542 aa11.8□□□□□ -0.52
CCDC7-209ENST00000539197 PRR12Q9ULL5 1215 aa11.8□□□□□ -0.52
CCDC7-209ENST00000539197 SFI1A8K8P3 1242 aa11.79□□□□□ -0.52
CCDC7-209ENST00000539197 ATP1A2P50993 1020 aa11.79□□□□□ -0.52
CCDC7-209ENST00000539197 LAMC2Q13753 1193 aa11.79□□□□□ -0.52
CCDC7-209ENST00000539197 ZNF594Q96JF6 807 aaPredicted RBP11.79□□□□□ -0.52
CCDC7-209ENST00000539197 MARK1Q9P0L2 795 aa11.79□□□□□ -0.52
CCDC7-209ENST00000539197 SERTM1A2A2V5 107 aa11.78□□□□□ -0.52
CCDC7-209ENST00000539197 DKK1O94907 266 aa11.78□□□□□ -0.52
CCDC7-209ENST00000539197 FNBP4Q8N3X1 1017 aaPredicted RBP11.78□□□□□ -0.52
CCDC7-209ENST00000539197 TSEN2Q8NCE0 465 aaKnown RBP11.78□□□□□ -0.52
CCDC7-209ENST00000539197 NEUROD4Q9HD90 331 aa11.78□□□□□ -0.52
CCDC7-209ENST00000539197 HCN4Q9Y3Q4 1203 aa11.78□□□□□ -0.52
CCDC7-209ENST00000539197 ZNF468Q5VIY5 522 aaPredicted RBP11.77□□□□□ -0.53
CCDC7-209ENST00000539197 GPC6Q9Y625 555 aaPredicted RBP11.77□□□□□ -0.53
CCDC7-209ENST00000539197 SFSWAPQ12872 951 aaKnown RBP11.76□□□□□ -0.53
CCDC7-209ENST00000539197 GLMNQ92990 594 aa11.76□□□□□ -0.53
CCDC7-209ENST00000539197 TFIP11Q9UBB9 837 aaKnown RBP11.76□□□□□ -0.53
CCDC7-209ENST00000539197 HSH2DQ96JZ2 352 aa11.75□□□□□ -0.53
CCDC7-209ENST00000539197 NOP53Q9NZM5 478 aaKnown RBP11.75□□□□□ -0.53
CCDC7-209ENST00000539197 PROSER2Q86WR7 435 aaPredicted RBP11.74□□□□□ -0.53
CCDC7-209ENST00000539197 LARGE2Q8N3Y3 721 aa11.74□□□□□ -0.53
CCDC7-209ENST00000539197 RHPN1Q8TCX5 695 aa11.74□□□□□ -0.53
CCDC7-209ENST00000539197 SLC30A3Q99726 388 aa11.74□□□□□ -0.53
CCDC7-209ENST00000539197 PALM3A6NDB9 673 aaPredicted RBP11.73□□□□□ -0.53
CCDC7-209ENST00000539197 C21orf2O43822 256 aa11.73□□□□□ -0.53
CCDC7-209ENST00000539197 LGR5O75473 907 aa11.73□□□□□ -0.53
CCDC7-209ENST00000539197 SYT9Q86SS6 491 aa11.73□□□□□ -0.53
CCDC7-209ENST00000539197 SIX5Q8N196 739 aa11.73□□□□□ -0.53
CCDC7-209ENST00000539197 ZNF280CQ8ND82 737 aa11.73□□□□□ -0.53
CCDC7-209ENST00000539197 PHACTR1Q9C0D0 580 aa11.73□□□□□ -0.53
CCDC7-209ENST00000539197 CHMP3Q9Y3E7 222 aa11.73□□□□□ -0.53
CCDC7-209ENST00000539197 ADAM23O75077 832 aa11.72□□□□□ -0.53
CCDC7-209ENST00000539197 PSMA6P60900 246 aaKnown RBP11.72□□□□□ -0.53
CCDC7-209ENST00000539197 GAS2L2Q8NHY3 880 aa11.72□□□□□ -0.53
CCDC7-209ENST00000539197 RAB44Q7Z6P3 723 aaPredicted RBP11.71□□□□□ -0.53
CCDC7-209ENST00000539197 RBM19Q9Y4C8 960 aaKnown RBP11.71□□□□□ -0.53
CCDC7-209ENST00000539197 MAFBQ9Y5Q3 323 aaPredicted RBP11.71□□□□□ -0.53
CCDC7-209ENST00000539197 M0R2N6 131 aa11.7□□□□□ -0.54
CCDC7-209ENST00000539197 RASA1P20936 1047 aa11.7□□□□□ -0.54
CCDC7-209ENST00000539197 C1orf53Q5VUE5 145 aa11.7□□□□□ -0.54
CCDC7-209ENST00000539197 POTEAQ6S8J7 498 aa11.7□□□□□ -0.54
CCDC7-209ENST00000539197 TRIM11Q96F44 468 aa11.7□□□□□ -0.54
CCDC7-209ENST00000539197 PPP1R12BO60237 982 aaPredicted RBP11.69□□□□□ -0.54
CCDC7-209ENST00000539197 ALAS2P22557 587 aa11.69□□□□□ -0.54
CCDC7-209ENST00000539197 BAG6P46379 1132 aa11.69□□□□□ -0.54
CCDC7-209ENST00000539197 MDFIQ99750 246 aa11.69□□□□□ -0.54
CCDC7-209ENST00000539197 ELOA3CA0A087WX78 387 aaPredicted RBP11.68□□□□□ -0.54
CCDC7-209ENST00000539197 ELOA3DA6NLF2 546 aaPredicted RBP11.68□□□□□ -0.54
CCDC7-209ENST00000539197 C1QTNF9BB2RNN3 333 aa11.68□□□□□ -0.54
CCDC7-209ENST00000539197 HIRAP54198 1017 aaPredicted RBP11.68□□□□□ -0.54
CCDC7-209ENST00000539197 TMEM132AQ24JP5 1023 aa11.68□□□□□ -0.54
CCDC7-209ENST00000539197 ELOA3BQ3SY89 546 aa11.68□□□□□ -0.54
CCDC7-209ENST00000539197 CD163Q86VB7 1156 aa11.68□□□□□ -0.54
CCDC7-209ENST00000539197 ELOA3Q8NG57 546 aa11.68□□□□□ -0.54
CCDC7-209ENST00000539197 CHRNA4P43681 627 aa11.67□□□□□ -0.54
CCDC7-209ENST00000539197 SUSD3Q96L08 255 aa11.67□□□□□ -0.54
CCDC7-209ENST00000539197 CEP63Q96MT8 703 aa11.67□□□□□ -0.54
CCDC7-209ENST00000539197 ANKIB1Q9P2G1 1089 aa11.67□□□□□ -0.54
CCDC7-209ENST00000539197 CRTC2Q53ET0 693 aaPredicted RBP11.66□□□□□ -0.54
CCDC7-209ENST00000539197 CHMP7Q8WUX9 453 aaPredicted RBP11.66□□□□□ -0.54
CCDC7-209ENST00000539197 SCG3Q8WXD2 468 aaKnown RBP11.66□□□□□ -0.54
CCDC7-209ENST00000539197 BRD7Q9NPI1 651 aa11.66□□□□□ -0.54
CCDC7-209ENST00000539197 ATAD2Q6PL18 1390 aa11.66□□□□□ -0.54
CCDC7-209ENST00000539197 K7ELQ4 463 aaPredicted RBP11.65□□□□□ -0.54
CCDC7-209ENST00000539197 SIN3BO75182 1162 aa11.65□□□□□ -0.54
CCDC7-209ENST00000539197 FURINP09958 794 aa11.65□□□□□ -0.54
CCDC7-209ENST00000539197 SPEM2Q0P670 501 aa11.65□□□□□ -0.54
CCDC7-209ENST00000539197 ALDH16A1Q8IZ83 802 aa11.65□□□□□ -0.54
CCDC7-209ENST00000539197 NGLY1Q96IV0 654 aa11.65□□□□□ -0.54
CCDC7-209ENST00000539197 PLVAPQ9BX97 442 aa11.65□□□□□ -0.54
CCDC7-209ENST00000539197 TYRO3Q06418 890 aa11.64□□□□□ -0.55
CCDC7-209ENST00000539197 NEUROD1Q13562 356 aa11.64□□□□□ -0.55
CCDC7-209ENST00000539197 C8orf86Q6ZUL3 223 aa11.64□□□□□ -0.55
CCDC7-209ENST00000539197 C2orf49Q9BVC5 232 aaPredicted RBP11.64□□□□□ -0.55
CCDC7-209ENST00000539197 SEC13P55735 322 aa11.63□□□□□ -0.55
CCDC7-209ENST00000539197 KANK4Q5T7N3 995 aaPredicted RBP11.63□□□□□ -0.55
CCDC7-209ENST00000539197 PPP1R12CQ9BZL4 782 aa11.63□□□□□ -0.55
CCDC7-209ENST00000539197 STARD13Q9Y3M8 1113 aa11.63□□□□□ -0.55
CCDC7-209ENST00000539197 ADARB2-AS1A8MUL3 147 aa11.62□□□□□ -0.55
CCDC7-209ENST00000539197 CALR3Q96L12 384 aaKnown RBP11.62□□□□□ -0.55
CCDC7-209ENST00000539197 DPYDQ12882 1025 aa11.61□□□□□ -0.55
CCDC7-209ENST00000539197 PTK7Q13308 1070 aa11.61□□□□□ -0.55
CCDC7-209ENST00000539197 HINFPQ9BQA5 517 aa11.61□□□□□ -0.55
CCDC7-209ENST00000539197 COL9A3Q14050 684 aaPredicted RBP11.6□□□□□ -0.55
CCDC7-209ENST00000539197 TNFRSF25Q93038 417 aa11.6□□□□□ -0.55
CCDC7-209ENST00000539197 KCNH4Q9UQ05 1017 aa11.6□□□□□ -0.55
CCDC7-209ENST00000539197 SPDYE3A6NKU9 549 aa11.59□□□□□ -0.55
CCDC7-209ENST00000539197 M0R082 166 aa11.59□□□□□ -0.55
CCDC7-209ENST00000539197 ALBP02768 609 aa11.59□□□□□ -0.55
CCDC7-209ENST00000539197 SPATA31C1P0DKV0 1188 aa11.59□□□□□ -0.55
CCDC7-209ENST00000539197 KCNQ4P56696 695 aa11.59□□□□□ -0.55
CCDC7-209ENST00000539197 LARP1Q6PKG0 1096 aaKnown RBP11.59□□□□□ -0.55
CCDC7-209ENST00000539197 STAG2Q8N3U4 1231 aa11.59□□□□□ -0.55
CCDC7-209ENST00000539197 ZNF417Q8TAU3 575 aa11.59□□□□□ -0.55
CCDC7-209ENST00000539197 ZNF587Q96SQ5 575 aaPredicted RBP11.59□□□□□ -0.55
CCDC7-209ENST00000539197 FAM229AH3BQW9 127 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms