RNA–Protein interactions for RNA: ENST00000539121.1

USP30-210, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 4

Gene USP30, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-210ENST00000539121 CEMIPQ8WUJ3 1361 aa8.39□□□□□ -1.07
USP30-210ENST00000539121 FER1L6Q2WGJ9 1857 aa8.39□□□□□ -1.07
USP30-210ENST00000539121 RGL2O15211 777 aa8.39□□□□□ -1.07
USP30-210ENST00000539121 ERFEQ4G0M1 354 aa8.39□□□□□ -1.07
USP30-210ENST00000539121 CC2D1BQ5T0F9 858 aaKnown RBP8.39□□□□□ -1.07
USP30-210ENST00000539121 STYK1Q6J9G0 422 aa8.39□□□□□ -1.07
USP30-210ENST00000539121 PRR5LQ6MZQ0 368 aa8.39□□□□□ -1.07
USP30-210ENST00000539121 CLEC4GQ6UXB4 293 aa8.39□□□□□ -1.07
USP30-210ENST00000539121 BICDL1Q6ZP65 573 aa8.39□□□□□ -1.07
USP30-210ENST00000539121 CNKSR1Q969H4 720 aa8.39□□□□□ -1.07
USP30-210ENST00000539121 ZNF622Q969S3 477 aaKnown RBP eCLIP8.39□□□□□ -1.07
USP30-210ENST00000539121 SETDB2Q96T68 719 aa8.39□□□□□ -1.07
USP30-210ENST00000539121 ANKRD31Q8N7Z5 1873 aa8.38□□□□□ -1.07
USP30-210ENST00000539121 SIPA1L3O60292 1781 aaPredicted RBP8.38□□□□□ -1.07
USP30-210ENST00000539121 POTECB2RU33 542 aa8.38□□□□□ -1.07
USP30-210ENST00000539121 U2SURPO15042 1029 aaKnown RBP8.38□□□□□ -1.07
USP30-210ENST00000539121 C21orf2O43822 256 aa8.38□□□□□ -1.07
USP30-210ENST00000539121 CAMTA2O94983 1202 aa8.38□□□□□ -1.07
USP30-210ENST00000539121 SRGNP10124 158 aa8.38□□□□□ -1.07
USP30-210ENST00000539121 ST5P78524 1137 aa8.38□□□□□ -1.07
USP30-210ENST00000539121 COL13A1Q5TAT6 717 aaPredicted RBP8.38□□□□□ -1.07
USP30-210ENST00000539121 CNBD1Q8NA66 436 aa8.38□□□□□ -1.07
USP30-210ENST00000539121 TBC1D2BQ9UPU7 963 aa8.38□□□□□ -1.07
USP30-210ENST00000539121 COL3A1P02461 1466 aaPredicted RBP8.38□□□□□ -1.07
USP30-210ENST00000539121 TIAM2Q8IVF5 1701 aa8.37□□□□□ -1.07
USP30-210ENST00000539121 SCN7AQ01118 1682 aa8.37□□□□□ -1.07
USP30-210ENST00000539121 BTBD11A6QL63 1104 aa8.37□□□□□ -1.07
USP30-210ENST00000539121 NPHP1O15259 732 aa8.37□□□□□ -1.07
USP30-210ENST00000539121 A1BGP04217 495 aa8.37□□□□□ -1.07
USP30-210ENST00000539121 DZIP3Q86Y13 1208 aaKnown RBP8.37□□□□□ -1.07
USP30-210ENST00000539121 MASTLQ96GX5 879 aa8.37□□□□□ -1.07
USP30-210ENST00000539121 TAOK3Q9H2K8 898 aa8.37□□□□□ -1.07
USP30-210ENST00000539121 KLRG2A4D1S0 409 aaPredicted RBP8.36□□□□□ -1.07
USP30-210ENST00000539121 SNRPA1P09661 255 aaKnown RBP8.36□□□□□ -1.07
USP30-210ENST00000539121 PRPF40BQ6NWY9 871 aaKnown RBP8.36□□□□□ -1.07
USP30-210ENST00000539121 REM2Q8IYK8 340 aaPredicted RBP8.36□□□□□ -1.07
USP30-210ENST00000539121 CFAP53Q96M91 514 aa8.36□□□□□ -1.07
USP30-210ENST00000539121 RSPH6AQ9H0K4 717 aa8.36□□□□□ -1.07
USP30-210ENST00000539121 CREBZFQ9NS37 354 aa8.36□□□□□ -1.07
USP30-210ENST00000539121 NUDCQ9Y266 331 aa8.36□□□□□ -1.07
USP30-210ENST00000539121 ZNF652Q9Y2D9 606 aa8.36□□□□□ -1.07
USP30-210ENST00000539121 ZNF330Q9Y3S2 320 aaPredicted RBP8.36□□□□□ -1.07
USP30-210ENST00000539121 SLX4Q8IY92 1834 aa8.36□□□□□ -1.07
USP30-210ENST00000539121 IQCA1LA6NCM1 817 aa8.35□□□□□ -1.07
USP30-210ENST00000539121 SPDYE4A6NLX3 237 aa8.35□□□□□ -1.07
USP30-210ENST00000539121 HTATSF1O43719 755 aaKnown RBP8.35□□□□□ -1.07
USP30-210ENST00000539121 PRKAR2BP31323 418 aa8.35□□□□□ -1.07
USP30-210ENST00000539121 CHADLQ6NUI6 762 aa8.35□□□□□ -1.07
USP30-210ENST00000539121 TNS4Q8IZW8 715 aa8.35□□□□□ -1.07
USP30-210ENST00000539121 C7orf43Q8WVR3 580 aa8.35□□□□□ -1.07
USP30-210ENST00000539121 L3MBTL3Q96JM7 780 aaPredicted RBP8.35□□□□□ -1.07
USP30-210ENST00000539121 PHACTR3Q96KR7 559 aa8.35□□□□□ -1.07
USP30-210ENST00000539121 USP16Q9Y5T5 823 aa8.35□□□□□ -1.07
USP30-210ENST00000539121 COL11A2P13942 1736 aaPredicted RBP8.34□□□□□ -1.07
USP30-210ENST00000539121 SCN4AP35499 1836 aa8.34□□□□□ -1.07
USP30-210ENST00000539121 KCNQ3O43525 872 aa8.34□□□□□ -1.07
USP30-210ENST00000539121 DDNO94850 711 aaPredicted RBP8.34□□□□□ -1.07
USP30-210ENST00000539121 HSPA1AP0DMV8 641 aaKnown RBP8.34□□□□□ -1.07
USP30-210ENST00000539121 HSPA1BP0DMV9 641 aaKnown RBP8.34□□□□□ -1.07
USP30-210ENST00000539121 NPR1P16066 1061 aa8.34□□□□□ -1.07
USP30-210ENST00000539121 CCDC93Q567U6 631 aa8.34□□□□□ -1.07
USP30-210ENST00000539121 TPTE2Q6XPS3 522 aa8.34□□□□□ -1.07
USP30-210ENST00000539121 NBPF5PQ86XG9 351 aaPredicted RBP8.34□□□□□ -1.07
USP30-210ENST00000539121 RTKN2Q8IZC4 609 aa8.34□□□□□ -1.07
USP30-210ENST00000539121 RTF1Q92541 710 aaKnown RBP8.34□□□□□ -1.07
USP30-210ENST00000539121 BCORQ6W2J9 1755 aa8.34□□□□□ -1.07
USP30-210ENST00000539121 ARFGEF2Q9Y6D5 1785 aa8.34□□□□□ -1.07
USP30-210ENST00000539121 ALDH1B1P30837 517 aa8.33□□□□□ -1.08
USP30-210ENST00000539121 FKBP4Q02790 459 aaKnown RBP eCLIP8.33□□□□□ -1.08
USP30-210ENST00000539121 LDHDQ86WU2 507 aa8.33□□□□□ -1.08
USP30-210ENST00000539121 CCDC24Q8N4L8 307 aa8.33□□□□□ -1.08
USP30-210ENST00000539121 U2AF1L5P0DN76 240 aaPredicted RBP8.32□□□□□ -1.08
USP30-210ENST00000539121 U2AF1Q01081 240 aaKnown RBP eCLIP8.32□□□□□ -1.08
USP30-210ENST00000539121 TAF7Q15545 349 aaPredicted RBP8.32□□□□□ -1.08
USP30-210ENST00000539121 TAF1DQ9H5J8 278 aaPredicted RBP8.32□□□□□ -1.08
USP30-210ENST00000539121 NIP7Q9Y221 180 aaKnown RBP eCLIP8.32□□□□□ -1.08
USP30-210ENST00000539121 CLEC11AQ9Y240 323 aa8.32□□□□□ -1.08
USP30-210ENST00000539121 CACNA1SQ13698 1873 aa8.32□□□□□ -1.08
USP30-210ENST00000539121 PASKQ96RG2 1323 aa8.31□□□□□ -1.08
USP30-210ENST00000539121 NBPF26B4DH59 902 aa8.31□□□□□ -1.08
USP30-210ENST00000539121 ERVV-1B6SEH8 477 aa8.31□□□□□ -1.08
USP30-210ENST00000539121 GRIPAP1Q4V328 841 aa8.31□□□□□ -1.08
USP30-210ENST00000539121 CC2D2BQ6DHV5 1058 aa8.31□□□□□ -1.08
USP30-210ENST00000539121 NBPF10Q6P3W6 841 aaKnown RBP8.31□□□□□ -1.08
USP30-210ENST00000539121 MCM10Q7L590 875 aa8.31□□□□□ -1.08
USP30-210ENST00000539121 NBPF15Q8N660 670 aa8.31□□□□□ -1.08
USP30-210ENST00000539121 NYXQ9GZU5 481 aa8.31□□□□□ -1.08
USP30-210ENST00000539121 SSUH2Q9Y2M2 353 aa8.31□□□□□ -1.08
USP30-210ENST00000539121 CNTNAP1P78357 1384 aa8.31□□□□□ -1.08
USP30-210ENST00000539121 PRAMEF22A3QJZ6 481 aa8.3□□□□□ -1.08
USP30-210ENST00000539121 TMEM88BA6NKF7 163 aa8.3□□□□□ -1.08
USP30-210ENST00000539121 FZD9O00144 591 aa8.3□□□□□ -1.08
USP30-210ENST00000539121 ITGBL1O95965 494 aaPredicted RBP8.3□□□□□ -1.08
USP30-210ENST00000539121 POTEIP0CG38 1075 aa8.3□□□□□ -1.08
USP30-210ENST00000539121 POTEJP0CG39 1038 aa8.3□□□□□ -1.08
USP30-210ENST00000539121 PPP2R1AP30153 589 aa8.3□□□□□ -1.08
USP30-210ENST00000539121 PIP4K2AP48426 406 aaPredicted RBP8.3□□□□□ -1.08
USP30-210ENST00000539121 CRY2Q49AN0 593 aa8.3□□□□□ -1.08
USP30-210ENST00000539121 CHRDL2Q6WN34 429 aa8.3□□□□□ -1.08
USP30-210ENST00000539121 PNMA8AQ86V59 439 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms