RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 NBPF14Q5TI25 921 aa25.15■■□□□ 1.62
DDX55-205ENST00000538744 NBPF10Q6P3W6 841 aaKnown RBP25.15■■□□□ 1.62
DDX55-205ENST00000538744 NBPF15Q8N660 670 aa25.15■■□□□ 1.62
DDX55-205ENST00000538744 SUCLG2Q96I99 432 aa25.15■■□□□ 1.62
DDX55-205ENST00000538744 CDCA7Q9BWT1 371 aaPredicted RBP25.15■■□□□ 1.62
DDX55-205ENST00000538744 RHPN1Q8TCX5 695 aa25.14■■□□□ 1.61
DDX55-205ENST00000538744 STAP2Q9UGK3 403 aa25.14■■□□□ 1.61
DDX55-205ENST00000538744 CASC1Q6TDU7 716 aa25.13■■□□□ 1.61
DDX55-205ENST00000538744 PIGBQ92521 554 aa25.13■■□□□ 1.61
DDX55-205ENST00000538744 AOX1Q06278 1338 aa25.13■■□□□ 1.61
DDX55-205ENST00000538744 THRAP3Q9Y2W1 955 aaKnown RBP25.12■■□□□ 1.61
DDX55-205ENST00000538744 SPATA31A1Q5TZJ5 1347 aa25.11■■□□□ 1.61
DDX55-205ENST00000538744 A1BGP04217 495 aa25.11■■□□□ 1.61
DDX55-205ENST00000538744 VSIG10Q8N0Z9 540 aa25.11■■□□□ 1.61
DDX55-205ENST00000538744 KAZALD1Q96I82 304 aa25.11■■□□□ 1.61
DDX55-205ENST00000538744 TEX13AQ9BXU3 409 aaPredicted RBP25.11■■□□□ 1.61
DDX55-205ENST00000538744 BICC1Q9H694 974 aaKnown RBP25.11■■□□□ 1.61
DDX55-205ENST00000538744 IL1RAPL2Q9NP60 686 aa25.11■■□□□ 1.61
DDX55-205ENST00000538744 BCL9O00512 1426 aa25.1■■□□□ 1.61
DDX55-205ENST00000538744 NUTM2BA6NNL0 878 aaPredicted RBP25.1■■□□□ 1.61
DDX55-205ENST00000538744 NUTM2EB1AL46 878 aaPredicted RBP25.1■■□□□ 1.61
DDX55-205ENST00000538744 NUTM2AQ8IVF1 878 aaPredicted RBP25.1■■□□□ 1.61
DDX55-205ENST00000538744 OS9Q13438 667 aaPredicted RBP25.09■■□□□ 1.61
DDX55-205ENST00000538744 ASAP1Q9ULH1 1129 aa25.09■■□□□ 1.61
DDX55-205ENST00000538744 DOT1LQ8TEK3 1739 aa25.09■■□□□ 1.61
DDX55-205ENST00000538744 ERC1Q8IUD2 1116 aa25.09■■□□□ 1.61
DDX55-205ENST00000538744 ATG3Q9NT62 314 aa25.09■■□□□ 1.61
DDX55-205ENST00000538744 COL15A1P39059 1388 aa25.08■■□□□ 1.61
DDX55-205ENST00000538744 SLIT2O94813 1529 aa25.07■■□□□ 1.6
DDX55-205ENST00000538744 UBAP1LF5GYI3 381 aa25.06■■□□□ 1.6
DDX55-205ENST00000538744 TSHZ3Q63HK5 1081 aa25.06■■□□□ 1.6
DDX55-205ENST00000538744 TTLL7Q6ZT98 887 aa25.06■■□□□ 1.6
DDX55-205ENST00000538744 ATP5J2-PTCD1G3V325 749 aa25.05■■□□□ 1.6
DDX55-205ENST00000538744 NUTM1Q86Y26 1132 aa25.05■■□□□ 1.6
DDX55-205ENST00000538744 TBC1D2Q9BYX2 928 aa25.05■■□□□ 1.6
DDX55-205ENST00000538744 AK9Q5TCS8 1911 aa25.05■■□□□ 1.6
DDX55-205ENST00000538744 TJP1Q07157 1748 aa25.04■■□□□ 1.6
DDX55-205ENST00000538744 SPATA31A5Q5VU36 1347 aa25.04■■□□□ 1.6
DDX55-205ENST00000538744 SPATA31A7Q8IWB4 1347 aa25.04■■□□□ 1.6
DDX55-205ENST00000538744 PA2G4Q9UQ80 394 aaKnown RBP25.04■■□□□ 1.6
DDX55-205ENST00000538744 DDB1Q16531 1140 aa25.03■■□□□ 1.6
DDX55-205ENST00000538744 DNAJC10Q8IXB1 793 aa25.03■■□□□ 1.6
DDX55-205ENST00000538744 RBM42Q9BTD8 480 aaKnown RBP25.03■■□□□ 1.6
DDX55-205ENST00000538744 A0A087WZG4 1122 aa25.03■■□□□ 1.6
DDX55-205ENST00000538744 STARD3NLO95772 234 aa25.03■■□□□ 1.6
DDX55-205ENST00000538744 UBE3BQ7Z3V4 1068 aa25.03■■□□□ 1.6
DDX55-205ENST00000538744 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.03■■□□□ 1.6
DDX55-205ENST00000538744 KAT6BQ8WYB5 2073 aa25.02■■□□□ 1.6
DDX55-205ENST00000538744 CLASRPQ8N2M8 674 aaKnown RBP25.02■■□□□ 1.6
DDX55-205ENST00000538744 USP42Q9H9J4 1324 aaKnown RBP25.01■■□□□ 1.59
DDX55-205ENST00000538744 G3BP1Q13283 466 aaKnown RBP eCLIP25.01■■□□□ 1.59
DDX55-205ENST00000538744 EPHA10Q5JZY3 1008 aa25.01■■□□□ 1.59
DDX55-205ENST00000538744 TRIM6-TRIM34B2RNG4 842 aa25■■□□□ 1.59
DDX55-205ENST00000538744 CWC25Q9NXE8 425 aaPredicted RBP25■■□□□ 1.59
DDX55-205ENST00000538744 ERC2O15083 957 aa25■■□□□ 1.59
DDX55-205ENST00000538744 REC8O95072 547 aa25■■□□□ 1.59
DDX55-205ENST00000538744 CASP7P55210 303 aa25■■□□□ 1.59
DDX55-205ENST00000538744 RABL6Q3YEC7 729 aaPredicted RBP25■■□□□ 1.59
DDX55-205ENST00000538744 BARGINQ6ZT62 677 aa25■■□□□ 1.59
DDX55-205ENST00000538744 SYTL4Q96C24 671 aaPredicted RBP25■■□□□ 1.59
DDX55-205ENST00000538744 ZBTB3Q9H5J0 574 aa25■■□□□ 1.59
DDX55-205ENST00000538744 TTC41PQ6P2S7 1318 aa24.99■■□□□ 1.59
DDX55-205ENST00000538744 PI4K2BQ8TCG2 481 aa24.99■■□□□ 1.59
DDX55-205ENST00000538744 RILPL2Q969X0 211 aa24.99■■□□□ 1.59
DDX55-205ENST00000538744 CCDC9Q9Y3X0 531 aaKnown RBP24.99■■□□□ 1.59
DDX55-205ENST00000538744 H7C1W4 665 aa24.98■■□□□ 1.59
DDX55-205ENST00000538744 PRIM1P49642 420 aaKnown RBP24.98■■□□□ 1.59
DDX55-205ENST00000538744 CCDC191Q8NCU4 936 aa24.98■■□□□ 1.59
DDX55-205ENST00000538744 JARID2Q92833 1246 aaPredicted RBP24.98■■□□□ 1.59
DDX55-205ENST00000538744 USP26Q9BXU7 913 aa24.98■■□□□ 1.59
DDX55-205ENST00000538744 JCADQ9P266 1359 aa24.98■■□□□ 1.59
DDX55-205ENST00000538744 HSCBQ8IWL3 235 aa24.98■■□□□ 1.59
DDX55-205ENST00000538744 KIF2CQ99661 725 aa24.98■■□□□ 1.59
DDX55-205ENST00000538744 NBR1Q14596 966 aa24.97■■□□□ 1.59
DDX55-205ENST00000538744 KIF6Q6ZMV9 814 aa24.97■■□□□ 1.59
DDX55-205ENST00000538744 SNX21Q969T3 373 aa24.97■■□□□ 1.59
DDX55-205ENST00000538744 GPATCH3Q96I76 525 aa24.97■■□□□ 1.59
DDX55-205ENST00000538744 COPRSQ9NQ92 184 aa24.96■■□□□ 1.59
DDX55-205ENST00000538744 SASH1O94885 1247 aa24.95■■□□□ 1.59
DDX55-205ENST00000538744 IFIT2P09913 472 aaKnown RBP24.95■■□□□ 1.59
DDX55-205ENST00000538744 GLRX3O76003 335 aaKnown RBP24.95■■□□□ 1.58
DDX55-205ENST00000538744 CHMLP26374 656 aa24.95■■□□□ 1.58
DDX55-205ENST00000538744 UNC5CLQ8IV45 518 aa24.95■■□□□ 1.58
DDX55-205ENST00000538744 SLC4A9Q96Q91 983 aa24.95■■□□□ 1.58
DDX55-205ENST00000538744 ZNF330Q9Y3S2 320 aaPredicted RBP24.95■■□□□ 1.58
DDX55-205ENST00000538744 CYP19A1P11511 503 aaPredicted RBP24.94■■□□□ 1.58
DDX55-205ENST00000538744 RFX5P48382 616 aaPredicted RBP24.94■■□□□ 1.58
DDX55-205ENST00000538744 MARCH10Q8NA82 808 aaPredicted RBP24.94■■□□□ 1.58
DDX55-205ENST00000538744 ESYT1Q9BSJ8 1104 aa24.94■■□□□ 1.58
DDX55-205ENST00000538744 ISCA1Q9BUE6 129 aa24.94■■□□□ 1.58
DDX55-205ENST00000538744 SIL1Q9H173 461 aa24.94■■□□□ 1.58
DDX55-205ENST00000538744 TCIRG1Q13488 830 aa24.93■■□□□ 1.58
DDX55-205ENST00000538744 AACSQ86V21 672 aa24.93■■□□□ 1.58
DDX55-205ENST00000538744 ECHDC1Q9NTX5 307 aa24.93■■□□□ 1.58
DDX55-205ENST00000538744 CNTROBQ8N137 903 aa24.92■■□□□ 1.58
DDX55-205ENST00000538744 ANKRD36CQ5JPF3 1778 aa24.92■■□□□ 1.58
DDX55-205ENST00000538744 FOXO4P98177 505 aa24.92■■□□□ 1.58
DDX55-205ENST00000538744 KLHDC4Q8TBB5 520 aa24.92■■□□□ 1.58
DDX55-205ENST00000538744 PTPN12Q05209 780 aaKnown RBP24.91■■□□□ 1.58
DDX55-205ENST00000538744 TRIM28Q13263 835 aaKnown RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms