RNA–Protein interactions for RNA: ENST00000538413.5

LRTOMT-214, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2

Gene LRTOMT, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-214ENST00000538413 SCN7AQ01118 1682 aa18.88■□□□□ 0.61
LRTOMT-214ENST00000538413 COL11A2P13942 1736 aaPredicted RBP18.88■□□□□ 0.61
LRTOMT-214ENST00000538413 VIRMAQ69YN4 1812 aaKnown RBP18.87■□□□□ 0.61
LRTOMT-214ENST00000538413 IL17REQ8NFR9 667 aa18.87■□□□□ 0.61
LRTOMT-214ENST00000538413 GAS2L2Q8NHY3 880 aa18.87■□□□□ 0.61
LRTOMT-214ENST00000538413 L3MBTL3Q96JM7 780 aaPredicted RBP18.87■□□□□ 0.61
LRTOMT-214ENST00000538413 PCGF6Q9BYE7 350 aa18.87■□□□□ 0.61
LRTOMT-214ENST00000538413 TAF1DQ9H5J8 278 aaPredicted RBP18.87■□□□□ 0.61
LRTOMT-214ENST00000538413 CTCFP49711 727 aaPredicted RBP18.86■□□□□ 0.61
LRTOMT-214ENST00000538413 CCDC93Q567U6 631 aa18.86■□□□□ 0.61
LRTOMT-214ENST00000538413 DZIP3Q86Y13 1208 aaKnown RBP18.86■□□□□ 0.61
LRTOMT-214ENST00000538413 TMEM88BA6NKF7 163 aa18.85■□□□□ 0.61
LRTOMT-214ENST00000538413 VEGFBP49765 207 aa18.85■□□□□ 0.61
LRTOMT-214ENST00000538413 NBPF5PQ86XG9 351 aaPredicted RBP18.85■□□□□ 0.61
LRTOMT-214ENST00000538413 SLX4Q8IY92 1834 aa18.84■□□□□ 0.61
LRTOMT-214ENST00000538413 U2SURPO15042 1029 aaKnown RBP18.84■□□□□ 0.61
LRTOMT-214ENST00000538413 EAPPQ56P03 285 aaPredicted RBP18.84■□□□□ 0.61
LRTOMT-214ENST00000538413 CC2D1BQ5T0F9 858 aaKnown RBP18.83■□□□□ 0.6
LRTOMT-214ENST00000538413 C7orf43Q8WVR3 580 aa18.83■□□□□ 0.6
LRTOMT-214ENST00000538413 CLEC11AQ9Y240 323 aa18.83■□□□□ 0.6
LRTOMT-214ENST00000538413 BTBD11A6QL63 1104 aa18.82■□□□□ 0.6
LRTOMT-214ENST00000538413 ITGBL1O95965 494 aaPredicted RBP18.82■□□□□ 0.6
LRTOMT-214ENST00000538413 NPR1P16066 1061 aa18.82■□□□□ 0.6
LRTOMT-214ENST00000538413 FKBP4Q02790 459 aaKnown RBP eCLIP18.82■□□□□ 0.6
LRTOMT-214ENST00000538413 CLEC4GQ6UXB4 293 aa18.82■□□□□ 0.6
LRTOMT-214ENST00000538413 HACL1Q9UJ83 578 aa18.82■□□□□ 0.6
LRTOMT-214ENST00000538413 ZNF652Q9Y2D9 606 aa18.82■□□□□ 0.6
LRTOMT-214ENST00000538413 ZNF277Q9NRM2 450 aaPredicted RBP18.81■□□□□ 0.6
LRTOMT-214ENST00000538413 ZNF541Q9H0D2 1346 aa18.8■□□□□ 0.6
LRTOMT-214ENST00000538413 SCN4AP35499 1836 aa18.8■□□□□ 0.6
LRTOMT-214ENST00000538413 EPHX2P34913 555 aa18.8■□□□□ 0.6
LRTOMT-214ENST00000538413 PNMA8AQ86V59 439 aaPredicted RBP18.8■□□□□ 0.6
LRTOMT-214ENST00000538413 RTKN2Q8IZC4 609 aa18.8■□□□□ 0.6
LRTOMT-214ENST00000538413 WBP1LQ9NX94 342 aa18.8■□□□□ 0.6
LRTOMT-214ENST00000538413 KIF7Q2M1P5 1343 aa18.79■□□□□ 0.6
LRTOMT-214ENST00000538413 KCNQ3O43525 872 aa18.79■□□□□ 0.6
LRTOMT-214ENST00000538413 PIP4K2AP48426 406 aaPredicted RBP18.79■□□□□ 0.6
LRTOMT-214ENST00000538413 LBX1P52954 281 aa18.79■□□□□ 0.6
LRTOMT-214ENST00000538413 TPTE2Q6XPS3 522 aa18.79■□□□□ 0.6
LRTOMT-214ENST00000538413 USP16Q9Y5T5 823 aa18.79■□□□□ 0.6
LRTOMT-214ENST00000538413 CEMIPQ8WUJ3 1361 aa18.79■□□□□ 0.6
LRTOMT-214ENST00000538413 KLRG2A4D1S0 409 aaPredicted RBP18.78■□□□□ 0.6
LRTOMT-214ENST00000538413 PER1O15534 1290 aaPredicted RBP18.78■□□□□ 0.6
LRTOMT-214ENST00000538413 ARFGEF2Q9Y6D5 1785 aa18.78■□□□□ 0.6
LRTOMT-214ENST00000538413 CACNA1SQ13698 1873 aa18.77■□□□□ 0.6
LRTOMT-214ENST00000538413 DEFB115Q30KQ5 88 aa18.77■□□□□ 0.6
LRTOMT-214ENST00000538413 CNTROBQ8N137 903 aa18.77■□□□□ 0.6
LRTOMT-214ENST00000538413 NIP7Q9Y221 180 aaKnown RBP eCLIP18.77■□□□□ 0.6
LRTOMT-214ENST00000538413 RNF123Q5XPI4 1314 aa18.76■□□□□ 0.59
LRTOMT-214ENST00000538413 SIPA1L3O60292 1781 aaPredicted RBP18.76■□□□□ 0.59
LRTOMT-214ENST00000538413 RASSF10A6NK89 507 aa18.76■□□□□ 0.59
LRTOMT-214ENST00000538413 SNRPA1P09661 255 aaKnown RBP18.76■□□□□ 0.59
LRTOMT-214ENST00000538413 ALDH1B1P30837 517 aa18.76■□□□□ 0.59
LRTOMT-214ENST00000538413 IARSP41252 1262 aaKnown RBP18.76■□□□□ 0.59
LRTOMT-214ENST00000538413 MAP1SQ66K74 1059 aaPredicted RBP18.76■□□□□ 0.59
LRTOMT-214ENST00000538413 OLFM4Q6UX06 510 aa18.76■□□□□ 0.59
LRTOMT-214ENST00000538413 COL3A1P02461 1466 aaPredicted RBP18.76■□□□□ 0.59
LRTOMT-214ENST00000538413 BCORQ6W2J9 1755 aa18.76■□□□□ 0.59
LRTOMT-214ENST00000538413 FAM177BA6PVY3 158 aa18.75■□□□□ 0.59
LRTOMT-214ENST00000538413 FZD9O00144 591 aa18.75■□□□□ 0.59
LRTOMT-214ENST00000538413 RGL2O15211 777 aa18.75■□□□□ 0.59
LRTOMT-214ENST00000538413 MAP2K1Q02750 393 aaPredicted RBP18.75■□□□□ 0.59
LRTOMT-214ENST00000538413 CNGB1Q14028 1251 aaPredicted RBP18.75■□□□□ 0.59
LRTOMT-214ENST00000538413 GPC2Q8N158 579 aa18.75■□□□□ 0.59
LRTOMT-214ENST00000538413 SYNE4Q8N205 404 aa18.75■□□□□ 0.59
LRTOMT-214ENST00000538413 ABT1Q9ULW3 272 aaKnown RBP18.75■□□□□ 0.59
LRTOMT-214ENST00000538413 PRAMEF22A3QJZ6 481 aa18.74■□□□□ 0.59
LRTOMT-214ENST00000538413 GTF2E1P29083 439 aaPredicted RBP18.74■□□□□ 0.59
LRTOMT-214ENST00000538413 JDP2Q8WYK2 163 aa18.74■□□□□ 0.59
LRTOMT-214ENST00000538413 PHACTR3Q96KR7 559 aa18.74■□□□□ 0.59
LRTOMT-214ENST00000538413 HSPA8P11142 646 aaKnown RBP18.73■□□□□ 0.59
LRTOMT-214ENST00000538413 PRKAR2BP31323 418 aa18.73■□□□□ 0.59
LRTOMT-214ENST00000538413 RTF1Q92541 710 aaKnown RBP18.73■□□□□ 0.59
LRTOMT-214ENST00000538413 WDR33Q9C0J8 1336 aaKnown RBP18.73■□□□□ 0.59
LRTOMT-214ENST00000538413 ABHD8Q96I13 439 aa18.72■□□□□ 0.59
LRTOMT-214ENST00000538413 NBPF26B4DH59 902 aa18.71■□□□□ 0.59
LRTOMT-214ENST00000538413 EIF6P56537 245 aaKnown RBP18.71■□□□□ 0.59
LRTOMT-214ENST00000538413 NBPF10Q6P3W6 841 aaKnown RBP18.71■□□□□ 0.59
LRTOMT-214ENST00000538413 NBPF15Q8N660 670 aa18.71■□□□□ 0.59
LRTOMT-214ENST00000538413 PSMD1Q99460 953 aa18.71■□□□□ 0.59
LRTOMT-214ENST00000538413 ADAMTSL1Q8N6G6 1762 aa18.7■□□□□ 0.58
LRTOMT-214ENST00000538413 NPC1L1Q9UHC9 1359 aa18.7■□□□□ 0.58
LRTOMT-214ENST00000538413 LMOD1P29536 600 aaPredicted RBP18.7■□□□□ 0.58
LRTOMT-214ENST00000538413 CFAP53Q96M91 514 aa18.7■□□□□ 0.58
LRTOMT-214ENST00000538413 RSPH6AQ9H0K4 717 aa18.7■□□□□ 0.58
LRTOMT-214ENST00000538413 DDX21Q9NR30 783 aaKnown RBP eCLIP18.7■□□□□ 0.58
LRTOMT-214ENST00000538413 GJA3Q9Y6H8 435 aa18.7■□□□□ 0.58
LRTOMT-214ENST00000538413 CC2D2BQ6DHV5 1058 aa18.69■□□□□ 0.58
LRTOMT-214ENST00000538413 MCM10Q7L590 875 aa18.69■□□□□ 0.58
LRTOMT-214ENST00000538413 HLFQ16534 295 aa18.68■□□□□ 0.58
LRTOMT-214ENST00000538413 PAXIP1Q6ZW49 1069 aaPredicted RBP18.68■□□□□ 0.58
LRTOMT-214ENST00000538413 BEGAINQ9BUH8 593 aa18.68■□□□□ 0.58
LRTOMT-214ENST00000538413 NYXQ9GZU5 481 aa18.68■□□□□ 0.58
LRTOMT-214ENST00000538413 NUDCQ9Y266 331 aa18.68■□□□□ 0.58
LRTOMT-214ENST00000538413 ECE1P42892 770 aa18.67■□□□□ 0.58
LRTOMT-214ENST00000538413 CRY2Q49AN0 593 aa18.67■□□□□ 0.58
LRTOMT-214ENST00000538413 CCER1Q8TC90 406 aaPredicted RBP18.67■□□□□ 0.58
LRTOMT-214ENST00000538413 CAPNS2Q96L46 248 aa18.67■□□□□ 0.58
LRTOMT-214ENST00000538413 FAM161AQ3B820 660 aa18.66■□□□□ 0.58
LRTOMT-214ENST00000538413 GRIPAP1Q4V328 841 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms