RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 ABT1Q9ULW3 272 aaKnown RBP15.21■□□□□ 0.03
CLPB-208ENST00000538021 SLX4Q8IY92 1834 aa15.21■□□□□ 0.03
CLPB-208ENST00000538021 MRC1P22897 1456 aa15.2■□□□□ 0.02
CLPB-208ENST00000538021 RASSF10A6NK89 507 aa15.2■□□□□ 0.02
CLPB-208ENST00000538021 SRGNP10124 158 aa15.2■□□□□ 0.02
CLPB-208ENST00000538021 MAP1SQ66K74 1059 aaPredicted RBP15.2■□□□□ 0.02
CLPB-208ENST00000538021 NPM2Q86SE8 214 aaKnown RBP15.2■□□□□ 0.02
CLPB-208ENST00000538021 ZNF541Q9H0D2 1346 aa15.19■□□□□ 0.02
CLPB-208ENST00000538021 HMOX1P09601 288 aa15.19■□□□□ 0.02
CLPB-208ENST00000538021 EPHX2P34913 555 aa15.19■□□□□ 0.02
CLPB-208ENST00000538021 CNTROBQ8N137 903 aa15.19■□□□□ 0.02
CLPB-208ENST00000538021 CCDC93Q567U6 631 aa15.18■□□□□ 0.02
CLPB-208ENST00000538021 PAXIP1Q6ZW49 1069 aaPredicted RBP15.18■□□□□ 0.02
CLPB-208ENST00000538021 ZNF277Q9NRM2 450 aaPredicted RBP15.18■□□□□ 0.02
CLPB-208ENST00000538021 PCDH10Q9P2E7 1040 aa15.18■□□□□ 0.02
CLPB-208ENST00000538021 RNF123Q5XPI4 1314 aa15.17■□□□□ 0.02
CLPB-208ENST00000538021 GRM1Q13255 1194 aa15.17■□□□□ 0.02
CLPB-208ENST00000538021 MTHFSDQ2M296 383 aaKnown RBP15.17■□□□□ 0.02
CLPB-208ENST00000538021 PNMA8AQ86V59 439 aaPredicted RBP15.17■□□□□ 0.02
CLPB-208ENST00000538021 CFAP44Q96MT7 982 aa15.17■□□□□ 0.02
CLPB-208ENST00000538021 BEGAINQ9BUH8 593 aa15.17■□□□□ 0.02
CLPB-208ENST00000538021 SCN7AQ01118 1682 aa15.16■□□□□ 0.02
CLPB-208ENST00000538021 IL6STP40189 918 aaPredicted RBP15.16■□□□□ 0.02
CLPB-208ENST00000538021 FKBP4Q02790 459 aaKnown RBP eCLIP15.16■□□□□ 0.02
CLPB-208ENST00000538021 ZNF496Q96IT1 587 aaPredicted RBP15.16■□□□□ 0.02
CLPB-208ENST00000538021 CAMTA2O94983 1202 aa15.15■□□□□ 0.02
CLPB-208ENST00000538021 C7orf43Q8WVR3 580 aa15.15■□□□□ 0.02
CLPB-208ENST00000538021 TEX13AQ9BXU3 409 aaPredicted RBP15.15■□□□□ 0.02
CLPB-208ENST00000538021 UBR2Q8IWV8 1755 aa15.15■□□□□ 0.02
CLPB-208ENST00000538021 HEG1Q9ULI3 1381 aa15.14■□□□□ 0.01
CLPB-208ENST00000538021 A1BGP04217 495 aa15.14■□□□□ 0.01
CLPB-208ENST00000538021 OLFM4Q6UX06 510 aa15.14■□□□□ 0.01
CLPB-208ENST00000538021 NBPF5PQ86XG9 351 aaPredicted RBP15.14■□□□□ 0.01
CLPB-208ENST00000538021 DDX21Q9NR30 783 aaKnown RBP eCLIP15.14■□□□□ 0.01
CLPB-208ENST00000538021 ADAMTSL1Q8N6G6 1762 aa15.13■□□□□ 0.01
CLPB-208ENST00000538021 ARFGEF2Q9Y6D5 1785 aa15.13■□□□□ 0.01
CLPB-208ENST00000538021 ECE1P42892 770 aa15.13■□□□□ 0.01
CLPB-208ENST00000538021 RGS19P49795 217 aa15.13■□□□□ 0.01
CLPB-208ENST00000538021 TEFQ10587 303 aa15.13■□□□□ 0.01
CLPB-208ENST00000538021 ZNF790Q6PG37 636 aa15.13■□□□□ 0.01
CLPB-208ENST00000538021 CAPNS2Q96L46 248 aa15.13■□□□□ 0.01
CLPB-208ENST00000538021 NPR1P16066 1061 aa15.12■□□□□ 0.01
CLPB-208ENST00000538021 IARSP41252 1262 aaKnown RBP15.12■□□□□ 0.01
CLPB-208ENST00000538021 CYP4F22Q6NT55 531 aa15.12■□□□□ 0.01
CLPB-208ENST00000538021 DZIP3Q86Y13 1208 aaKnown RBP15.12■□□□□ 0.01
CLPB-208ENST00000538021 RTKN2Q8IZC4 609 aa15.12■□□□□ 0.01
CLPB-208ENST00000538021 GPR101Q96P66 508 aaPredicted RBP15.12■□□□□ 0.01
CLPB-208ENST00000538021 TSKSQ9UJT2 592 aa15.12■□□□□ 0.01
CLPB-208ENST00000538021 FZD9O00144 591 aa15.11■□□□□ 0.01
CLPB-208ENST00000538021 FMR1Q06787 632 aaKnown RBP eCLIP15.11■□□□□ 0.01
CLPB-208ENST00000538021 GPC2Q8N158 579 aa15.11■□□□□ 0.01
CLPB-208ENST00000538021 SYNE4Q8N205 404 aa15.11■□□□□ 0.01
CLPB-208ENST00000538021 KNSTRNQ9Y448 316 aa15.11■□□□□ 0.01
CLPB-208ENST00000538021 GJA3Q9Y6H8 435 aa15.11■□□□□ 0.01
CLPB-208ENST00000538021 LMOD1P29536 600 aaPredicted RBP15.1■□□□□ 0.01
CLPB-208ENST00000538021 JDP2Q8WYK2 163 aa15.1■□□□□ 0.01
CLPB-208ENST00000538021 FMNL2Q96PY5 1086 aa15.1■□□□□ 0.01
CLPB-208ENST00000538021 FAM177BA6PVY3 158 aa15.09■□□□□ 0.01
CLPB-208ENST00000538021 PIP4K2AP48426 406 aaPredicted RBP15.09■□□□□ 0.01
CLPB-208ENST00000538021 AOC2O75106 756 aa15.08■□□□□ 0
CLPB-208ENST00000538021 EIF6P56537 245 aaKnown RBP15.08■□□□□ 0
CLPB-208ENST00000538021 TPTE2Q6XPS3 522 aa15.08■□□□□ 0
CLPB-208ENST00000538021 IL17REQ8NFR9 667 aa15.08■□□□□ 0
CLPB-208ENST00000538021 MCOLN1Q9GZU1 580 aa15.08■□□□□ 0
CLPB-208ENST00000538021 ZNF652Q9Y2D9 606 aa15.08■□□□□ 0
CLPB-208ENST00000538021 DIAPH1O60610 1272 aaKnown RBP15.07■□□□□ 0
CLPB-208ENST00000538021 ALDH1B1P30837 517 aa15.07■□□□□ 0
CLPB-208ENST00000538021 CLEC4GQ6UXB4 293 aa15.07■□□□□ 0
CLPB-208ENST00000538021 BCORQ6W2J9 1755 aa15.06■□□□□ 0
CLPB-208ENST00000538021 KLRG2A4D1S0 409 aaPredicted RBP15.06■□□□□ 0
CLPB-208ENST00000538021 GNAT3A8MTJ3 354 aa15.06■□□□□ 0
CLPB-208ENST00000538021 TRAF5O00463 557 aa15.06■□□□□ 0
CLPB-208ENST00000538021 KCNQ3O43525 872 aa15.06■□□□□ 0
CLPB-208ENST00000538021 EPS15P42566 896 aa15.06■□□□□ 0
CLPB-208ENST00000538021 CST9Q5W186 159 aa15.06■□□□□ 0
CLPB-208ENST00000538021 NIP7Q9Y221 180 aaKnown RBP eCLIP15.06■□□□□ 0
CLPB-208ENST00000538021 THSD7BQ9C0I4 1608 aa15.06■□□□□ 0
CLPB-208ENST00000538021 GTF2E1P29083 439 aaPredicted RBP15.05■□□□□ -0
CLPB-208ENST00000538021 MAP2K2P36507 400 aa15.05■□□□□ -0
CLPB-208ENST00000538021 EIF4G2P78344 907 aaKnown RBP eCLIP15.05■□□□□ -0
CLPB-208ENST00000538021 GAS2L2Q8NHY3 880 aa15.05■□□□□ -0
CLPB-208ENST00000538021 USP16Q9Y5T5 823 aa15.05■□□□□ -0
CLPB-208ENST00000538021 TLL2Q9Y6L7 1015 aa15.05■□□□□ -0
CLPB-208ENST00000538021 TNRC18O15417 2968 aaPredicted RBP15.04■□□□□ -0
CLPB-208ENST00000538021 BTBD11A6QL63 1104 aa15.04■□□□□ -0
CLPB-208ENST00000538021 HSPA5P11021 654 aaKnown RBP15.04■□□□□ -0
CLPB-208ENST00000538021 SCNN1DP51172 638 aa15.04■□□□□ -0
CLPB-208ENST00000538021 PSMD1Q99460 953 aa15.04■□□□□ -0
CLPB-208ENST00000538021 LTBP1Q14766 1721 aa15.03■□□□□ -0
CLPB-208ENST00000538021 PRAMEF22A3QJZ6 481 aa15.03■□□□□ -0
CLPB-208ENST00000538021 DGKZQ13574 1117 aa15.03■□□□□ -0
CLPB-208ENST00000538021 USP50Q70EL3 339 aaPredicted RBP15.03■□□□□ -0
CLPB-208ENST00000538021 LARGE2Q8N3Y3 721 aa15.03■□□□□ -0
CLPB-208ENST00000538021 U2SURPO15042 1029 aaKnown RBP15.02■□□□□ -0
CLPB-208ENST00000538021 CA12O43570 354 aa15.02■□□□□ -0
CLPB-208ENST00000538021 AMER1Q5JTC6 1135 aaPredicted RBP15.02■□□□□ -0
CLPB-208ENST00000538021 TIMELESSQ9UNS1 1208 aa15.02■□□□□ -0
CLPB-208ENST00000538021 CASP8AP2Q9UKL3 1982 aa15.02□□□□□ -0.01
CLPB-208ENST00000538021 TRPM7Q96QT4 1865 aa15.01□□□□□ -0.01
CLPB-208ENST00000538021 SIPA1L3O60292 1781 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms