RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 MXRA7P84157 204 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 WHAMMP3Q1A5X7 153 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 UBAC1Q9BSL1 405 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 CWC27Q6UX04 472 aaKnown RBP6.51□□□□□ -1.37
CSMD1-215ENST00000537824 STX6O43752 255 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 PPP2R5AQ15172 486 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 SAMD1Q6SPF0 538 aaPredicted RBP6.51□□□□□ -1.37
CSMD1-215ENST00000537824 ATF7IPQ6VMQ6 1270 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 RAB3IL1Q8TBN0 382 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 NKTRP30414 1462 aaKnown RBP6.51□□□□□ -1.37
CSMD1-215ENST00000537824 TBC1D9Q6ZT07 1266 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 FEZ2Q9UHY8 353 aaPredicted RBP6.51□□□□□ -1.37
CSMD1-215ENST00000537824 CTAGE15A4D2H0 777 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 CTAGE8P0CG41 777 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 KARSQ15046 597 aaKnown RBP6.51□□□□□ -1.37
CSMD1-215ENST00000537824 CTAGE6Q86UF2 777 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 CTAGE4Q8IX94 777 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 GBP5Q96PP8 586 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 KIF21BO75037 1637 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 TMX4Q9H1E5 349 aaPredicted RBP6.51□□□□□ -1.37
CSMD1-215ENST00000537824 A0A1W2PRG0 241 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 ZNF853P0CG23 659 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 GBP1P32455 592 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 NOP2P46087 812 aaKnown RBP6.51□□□□□ -1.37
CSMD1-215ENST00000537824 EVCP57679 992 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 EHBP1Q8NDI1 1231 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 PPP1R14CQ8TAE6 165 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 TRIM4Q9C037 500 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 LIMCH1Q9UPQ0 1083 aa6.51□□□□□ -1.37
CSMD1-215ENST00000537824 OAS2P29728 719 aaKnown RBP6.5□□□□□ -1.37
CSMD1-215ENST00000537824 HPDP32754 393 aaPredicted RBP6.5□□□□□ -1.37
CSMD1-215ENST00000537824 ISM2Q6H9L7 571 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 CTDP1Q9Y5B0 961 aaPredicted RBP6.5□□□□□ -1.37
CSMD1-215ENST00000537824 PIP4K2BP78356 416 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 USP48Q86UV5 1035 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 MICAL1Q8TDZ2 1067 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 SDK1Q7Z5N4 2213 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 ATP11AP98196 1134 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 KRT32Q14532 448 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 TAOK3Q9H2K8 898 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 NOL3O60936 208 aaKnown RBP6.5□□□□□ -1.37
CSMD1-215ENST00000537824 PRPF4BQ13523 1007 aaKnown RBP6.5□□□□□ -1.37
CSMD1-215ENST00000537824 FAM114A2Q9NRY5 505 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 SYT1P21579 422 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 VPS36Q86VN1 386 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 MLECQ14165 292 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 TSNAXIP1Q2TAA8 658 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 SELENOSQ9BQE4 189 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 BCL2L12Q9HB09 334 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 HOMEZQ8IX15 550 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 LUC7L2Q9Y383 392 aaKnown RBP6.5□□□□□ -1.37
CSMD1-215ENST00000537824 TACC1O75410 805 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 PPP1R12CQ9BZL4 782 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 RFC1P35251 1148 aaPredicted RBP6.5□□□□□ -1.37
CSMD1-215ENST00000537824 ANAPC15P60006 121 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 NEK11Q8NG66 645 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 POLA1P09884 1462 aaPredicted RBP6.5□□□□□ -1.37
CSMD1-215ENST00000537824 MTIF2P46199 727 aaKnown RBP6.5□□□□□ -1.37
CSMD1-215ENST00000537824 IFT74Q96LB3 600 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 RIPOR2Q9Y4F9 1068 aa6.5□□□□□ -1.37
CSMD1-215ENST00000537824 HDGFP51858 240 aaKnown RBP6.49□□□□□ -1.37
CSMD1-215ENST00000537824 CEP128Q6ZU80 1094 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 APBB1IPQ7Z5R6 666 aaPredicted RBP6.49□□□□□ -1.37
CSMD1-215ENST00000537824 PIBF1Q8WXW3 757 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 RBSNQ9H1K0 784 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 PUF60Q9UHX1 559 aaKnown RBP6.49□□□□□ -1.37
CSMD1-215ENST00000537824 MX1P20591 662 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 FAM200AQ8TCP9 573 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 MYH14Q7Z406 1995 aaKnown RBP6.49□□□□□ -1.37
CSMD1-215ENST00000537824 SPTBP11277 2137 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 KIF21AQ7Z4S6 1674 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 MACROD2A1Z1Q3 448 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 CCT4P50991 539 aaKnown RBP6.49□□□□□ -1.37
CSMD1-215ENST00000537824 CACNA2D4Q7Z3S7 1137 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 TCHPQ9BT92 498 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 TMEM132AQ24JP5 1023 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 AACSQ86V21 672 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 AOPEPQ8N6M6 819 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 AIMP1Q12904 312 aaKnown RBP6.49□□□□□ -1.37
CSMD1-215ENST00000537824 PRPF40BQ6NWY9 871 aaKnown RBP6.49□□□□□ -1.37
CSMD1-215ENST00000537824 SH2D4BQ5SQS7 431 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 GGT6Q6P531 493 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 RIC3Q7Z5B4 369 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 GUCY1B3Q02153 619 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 C8orf76Q96K31 380 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 LARP6Q9BRS8 491 aaKnown RBP6.49□□□□□ -1.37
CSMD1-215ENST00000537824 STIM2Q9P246 746 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 UBASH3AP57075 661 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 CTCFLQ8NI51 663 aaPredicted RBP6.49□□□□□ -1.37
CSMD1-215ENST00000537824 IFT81Q8WYA0 676 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 NUTM2FA1L443 756 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 NDUFAB1O14561 156 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 HMGB1P09429 215 aaKnown RBP6.49□□□□□ -1.37
CSMD1-215ENST00000537824 CETN2P41208 172 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 TBC1D2BQ9UPU7 963 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 SCAPERQ9BY12 1400 aa6.49□□□□□ -1.37
CSMD1-215ENST00000537824 RUSC2Q8N2Y8 1516 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 VIMP08670 466 aaKnown RBP6.48□□□□□ -1.37
CSMD1-215ENST00000537824 PEX19P40855 299 aa6.48□□□□□ -1.37
CSMD1-215ENST00000537824 LIG3P49916 1009 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms