RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 FMNL2Q96PY5 1086 aa11.39□□□□□ -0.59
UBE3B-207ENST00000537063 C9orf78Q9NZ63 289 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-207ENST00000537063 WNK3Q9BYP7 1800 aa11.38□□□□□ -0.59
UBE3B-207ENST00000537063 ZNF335Q9H4Z2 1342 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-207ENST00000537063 DDX11L8A8MPP1 907 aa11.38□□□□□ -0.59
UBE3B-207ENST00000537063 NEURL1BA8MQ27 555 aa11.38□□□□□ -0.59
UBE3B-207ENST00000537063 TNPO1Q92973 898 aaKnown RBP11.38□□□□□ -0.59
UBE3B-207ENST00000537063 METTL22Q9BUU2 404 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-207ENST00000537063 COL22A1Q8NFW1 1626 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-207ENST00000537063 BCL11AQ9H165 835 aa11.37□□□□□ -0.59
UBE3B-207ENST00000537063 ST18O60284 1047 aa11.37□□□□□ -0.59
UBE3B-207ENST00000537063 CYP2E1P05181 493 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-207ENST00000537063 XAGE3Q8WTP9 111 aa11.37□□□□□ -0.59
UBE3B-207ENST00000537063 CARD10Q9BWT7 1032 aa11.37□□□□□ -0.59
UBE3B-207ENST00000537063 BICC1Q9H694 974 aaKnown RBP11.37□□□□□ -0.59
UBE3B-207ENST00000537063 ERVV-2B6SEH9 535 aa11.36□□□□□ -0.59
UBE3B-207ENST00000537063 GCKRQ14397 625 aa11.36□□□□□ -0.59
UBE3B-207ENST00000537063 TTC5Q8N0Z6 440 aa11.36□□□□□ -0.59
UBE3B-207ENST00000537063 USP16Q9Y5T5 823 aa11.36□□□□□ -0.59
UBE3B-207ENST00000537063 COL14A1Q05707 1796 aaKnown RBP11.36□□□□□ -0.59
UBE3B-207ENST00000537063 TRIM6-TRIM34B2RNG4 842 aa11.36□□□□□ -0.59
UBE3B-207ENST00000537063 RILPL2Q969X0 211 aa11.36□□□□□ -0.59
UBE3B-207ENST00000537063 IL25Q9H293 177 aa11.36□□□□□ -0.59
UBE3B-207ENST00000537063 PRDM11Q9NQV5 511 aa11.36□□□□□ -0.59
UBE3B-207ENST00000537063 LRP6O75581 1613 aa11.36□□□□□ -0.59
UBE3B-207ENST00000537063 CABP4P57796 275 aa11.36□□□□□ -0.59
UBE3B-207ENST00000537063 COPS6Q7L5N1 327 aa11.36□□□□□ -0.59
UBE3B-207ENST00000537063 GLRX3O76003 335 aaKnown RBP11.35□□□□□ -0.59
UBE3B-207ENST00000537063 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
UBE3B-207ENST00000537063 ZCRB1Q8TBF4 217 aaKnown RBP11.35□□□□□ -0.59
UBE3B-207ENST00000537063 SGSM2O43147 1006 aa11.35□□□□□ -0.59
UBE3B-207ENST00000537063 CNTROBQ8N137 903 aa11.35□□□□□ -0.59
UBE3B-207ENST00000537063 CWC22Q9HCG8 908 aaKnown RBP11.35□□□□□ -0.59
UBE3B-207ENST00000537063 RAD50Q92878 1312 aa11.35□□□□□ -0.59
UBE3B-207ENST00000537063 MCCP23508 829 aa11.35□□□□□ -0.59
UBE3B-207ENST00000537063 HSPA4P34932 840 aa11.35□□□□□ -0.59
UBE3B-207ENST00000537063 NEXNQ0ZGT2 675 aa11.35□□□□□ -0.59
UBE3B-207ENST00000537063 AIMP1Q12904 312 aaKnown RBP11.35□□□□□ -0.59
UBE3B-207ENST00000537063 RABL6Q3YEC7 729 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-207ENST00000537063 ANKRD13DQ6ZTN6 518 aa11.35□□□□□ -0.59
UBE3B-207ENST00000537063 PALD1Q9ULE6 856 aa11.35□□□□□ -0.59
UBE3B-207ENST00000537063 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.35□□□□□ -0.59
UBE3B-207ENST00000537063 AHDC1Q5TGY3 1603 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-207ENST00000537063 SASH1O94885 1247 aa11.34□□□□□ -0.59
UBE3B-207ENST00000537063 PTMSP20962 102 aa11.34□□□□□ -0.59
UBE3B-207ENST00000537063 CLASRPQ8N2M8 674 aaKnown RBP11.34□□□□□ -0.59
UBE3B-207ENST00000537063 GBP4Q96PP9 640 aa11.34□□□□□ -0.59
UBE3B-207ENST00000537063 COL16A1Q07092 1604 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-207ENST00000537063 ITGB4P16144 1822 aa11.34□□□□□ -0.59
UBE3B-207ENST00000537063 MYL6BP14649 208 aa11.34□□□□□ -0.59
UBE3B-207ENST00000537063 MCM2P49736 904 aa11.34□□□□□ -0.59
UBE3B-207ENST00000537063 CASP7P55210 303 aa11.34□□□□□ -0.59
UBE3B-207ENST00000537063 ECHDC1Q9NTX5 307 aa11.34□□□□□ -0.59
UBE3B-207ENST00000537063 PA2G4Q9UQ80 394 aaKnown RBP11.34□□□□□ -0.59
UBE3B-207ENST00000537063 HSP90AA1P07900 732 aaKnown RBP11.34□□□□□ -0.59
UBE3B-207ENST00000537063 TRAK2O60296 914 aa11.33□□□□□ -0.6
UBE3B-207ENST00000537063 IL2RBP14784 551 aa11.33□□□□□ -0.6
UBE3B-207ENST00000537063 PLBD2Q8NHP8 589 aa11.33□□□□□ -0.6
UBE3B-207ENST00000537063 MYD88Q99836 296 aa11.33□□□□□ -0.6
UBE3B-207ENST00000537063 LSG1Q9H089 658 aaKnown RBP11.33□□□□□ -0.6
UBE3B-207ENST00000537063 ANO2Q9NQ90 1003 aa11.33□□□□□ -0.6
UBE3B-207ENST00000537063 DISP2A7MBM2 1401 aa11.33□□□□□ -0.6
UBE3B-207ENST00000537063 FSD2A1L4K1 749 aa11.33□□□□□ -0.6
UBE3B-207ENST00000537063 RFX5P48382 616 aaPredicted RBP11.33□□□□□ -0.6
UBE3B-207ENST00000537063 CUL4AQ13619 759 aa11.33□□□□□ -0.6
UBE3B-207ENST00000537063 TOM1L2Q6ZVM7 507 aa11.33□□□□□ -0.6
UBE3B-207ENST00000537063 EPHA10Q5JZY3 1008 aa11.33□□□□□ -0.6
UBE3B-207ENST00000537063 SNRKQ9NRH2 765 aa11.33□□□□□ -0.6
UBE3B-207ENST00000537063 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.33□□□□□ -0.6
UBE3B-207ENST00000537063 NBPF26B4DH59 902 aa11.32□□□□□ -0.6
UBE3B-207ENST00000537063 SSFA2P28290 1259 aa11.32□□□□□ -0.6
UBE3B-207ENST00000537063 NUCB2P80303 420 aa11.32□□□□□ -0.6
UBE3B-207ENST00000537063 OS9Q13438 667 aaPredicted RBP11.32□□□□□ -0.6
UBE3B-207ENST00000537063 NBPF14Q5TI25 921 aa11.32□□□□□ -0.6
UBE3B-207ENST00000537063 NBPF10Q6P3W6 841 aaKnown RBP11.32□□□□□ -0.6
UBE3B-207ENST00000537063 NBPF15Q8N660 670 aa11.32□□□□□ -0.6
UBE3B-207ENST00000537063 GPATCH3Q96I76 525 aa11.32□□□□□ -0.6
UBE3B-207ENST00000537063 COPRSQ9NQ92 184 aa11.32□□□□□ -0.6
UBE3B-207ENST00000537063 FOXD4L1Q9NU39 408 aa11.32□□□□□ -0.6
UBE3B-207ENST00000537063 ROBO1Q9Y6N7 1651 aa11.31□□□□□ -0.6
UBE3B-207ENST00000537063 KCNB2Q92953 911 aa11.31□□□□□ -0.6
UBE3B-207ENST00000537063 EAF2Q96CJ1 260 aaPredicted RBP11.31□□□□□ -0.6
UBE3B-207ENST00000537063 JCADQ9P266 1359 aa11.31□□□□□ -0.6
UBE3B-207ENST00000537063 MAP4K4O95819 1239 aaPredicted RBP11.3□□□□□ -0.6
UBE3B-207ENST00000537063 IFIT2P09913 472 aaKnown RBP11.3□□□□□ -0.6
UBE3B-207ENST00000537063 NEK4P51957 841 aa11.3□□□□□ -0.6
UBE3B-207ENST00000537063 AACSQ86V21 672 aa11.3□□□□□ -0.6
UBE3B-207ENST00000537063 EVI5LQ96CN4 794 aa11.3□□□□□ -0.6
UBE3B-207ENST00000537063 INTS4Q96HW7 963 aaKnown RBP11.3□□□□□ -0.6
UBE3B-207ENST00000537063 TMX3Q96JJ7 454 aa11.3□□□□□ -0.6
UBE3B-207ENST00000537063 G3BP1Q13283 466 aaKnown RBP eCLIP11.3□□□□□ -0.6
UBE3B-207ENST00000537063 SKOR2Q2VWA4 1001 aaPredicted RBP11.3□□□□□ -0.6
UBE3B-207ENST00000537063 RFX7Q2KHR2 1363 aa11.29□□□□□ -0.6
UBE3B-207ENST00000537063 BAG4O95429 457 aaKnown RBP11.29□□□□□ -0.6
UBE3B-207ENST00000537063 ZGPATQ8N5A5 531 aaKnown RBP11.29□□□□□ -0.6
UBE3B-207ENST00000537063 ANKRD36CQ5JPF3 1778 aa11.29□□□□□ -0.6
UBE3B-207ENST00000537063 H7C1W4 665 aa11.29□□□□□ -0.6
UBE3B-207ENST00000537063 PTPN12Q05209 780 aaKnown RBP11.29□□□□□ -0.6
UBE3B-207ENST00000537063 ZDHHC9Q9Y397 364 aa11.29□□□□□ -0.6
UBE3B-207ENST00000537063 NRAPQ86VF7 1730 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms