RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 OGFOD1Q8N543 542 aa11.8□□□□□ -0.52
CCDC7-208ENST00000537047 SFI1A8K8P3 1242 aa11.79□□□□□ -0.52
CCDC7-208ENST00000537047 GNB5O14775 395 aa11.79□□□□□ -0.52
CCDC7-208ENST00000537047 ADH6P28332 368 aa11.79□□□□□ -0.52
CCDC7-208ENST00000537047 SAMD5Q5TGI4 173 aa11.79□□□□□ -0.52
CCDC7-208ENST00000537047 ZNF594Q96JF6 807 aaPredicted RBP11.79□□□□□ -0.52
CCDC7-208ENST00000537047 MARK1Q9P0L2 795 aa11.79□□□□□ -0.52
CCDC7-208ENST00000537047 SERTM1A2A2V5 107 aa11.78□□□□□ -0.52
CCDC7-208ENST00000537047 DKK1O94907 266 aa11.78□□□□□ -0.52
CCDC7-208ENST00000537047 FNBP4Q8N3X1 1017 aaPredicted RBP11.78□□□□□ -0.52
CCDC7-208ENST00000537047 TSEN2Q8NCE0 465 aaKnown RBP11.78□□□□□ -0.52
CCDC7-208ENST00000537047 AVENQ9NQS1 362 aaPredicted RBP11.78□□□□□ -0.52
CCDC7-208ENST00000537047 HCN4Q9Y3Q4 1203 aa11.78□□□□□ -0.52
CCDC7-208ENST00000537047 ATP1A2P50993 1020 aa11.77□□□□□ -0.53
CCDC7-208ENST00000537047 ZNF468Q5VIY5 522 aaPredicted RBP11.77□□□□□ -0.53
CCDC7-208ENST00000537047 PRR12Q9ULL5 1215 aa11.77□□□□□ -0.53
CCDC7-208ENST00000537047 SFSWAPQ12872 951 aaKnown RBP11.76□□□□□ -0.53
CCDC7-208ENST00000537047 GLMNQ92990 594 aa11.76□□□□□ -0.53
CCDC7-208ENST00000537047 TFIP11Q9UBB9 837 aaKnown RBP11.76□□□□□ -0.53
CCDC7-208ENST00000537047 HSH2DQ96JZ2 352 aa11.75□□□□□ -0.53
CCDC7-208ENST00000537047 K7ELQ4 463 aaPredicted RBP11.74□□□□□ -0.53
CCDC7-208ENST00000537047 PIK3R2O00459 728 aa11.74□□□□□ -0.53
CCDC7-208ENST00000537047 PROSER2Q86WR7 435 aaPredicted RBP11.74□□□□□ -0.53
CCDC7-208ENST00000537047 LARGE2Q8N3Y3 721 aa11.74□□□□□ -0.53
CCDC7-208ENST00000537047 RHPN1Q8TCX5 695 aa11.74□□□□□ -0.53
CCDC7-208ENST00000537047 SLC30A3Q99726 388 aa11.74□□□□□ -0.53
CCDC7-208ENST00000537047 PALM3A6NDB9 673 aaPredicted RBP11.73□□□□□ -0.53
CCDC7-208ENST00000537047 C1QTNF9BB2RNN3 333 aa11.73□□□□□ -0.53
CCDC7-208ENST00000537047 C21orf2O43822 256 aa11.73□□□□□ -0.53
CCDC7-208ENST00000537047 LGR5O75473 907 aa11.73□□□□□ -0.53
CCDC7-208ENST00000537047 SYT9Q86SS6 491 aa11.73□□□□□ -0.53
CCDC7-208ENST00000537047 SIX5Q8N196 739 aa11.73□□□□□ -0.53
CCDC7-208ENST00000537047 ZNF280CQ8ND82 737 aa11.73□□□□□ -0.53
CCDC7-208ENST00000537047 PHACTR1Q9C0D0 580 aa11.73□□□□□ -0.53
CCDC7-208ENST00000537047 PSMA6P60900 246 aaKnown RBP11.72□□□□□ -0.53
CCDC7-208ENST00000537047 CD163Q86VB7 1156 aa11.72□□□□□ -0.53
CCDC7-208ENST00000537047 GAS2L2Q8NHY3 880 aa11.72□□□□□ -0.53
CCDC7-208ENST00000537047 NEUROD4Q9HD90 331 aa11.72□□□□□ -0.53
CCDC7-208ENST00000537047 FURINP09958 794 aa11.71□□□□□ -0.53
CCDC7-208ENST00000537047 CHRNA4P43681 627 aa11.71□□□□□ -0.53
CCDC7-208ENST00000537047 LAMC2Q13753 1193 aa11.71□□□□□ -0.53
CCDC7-208ENST00000537047 RAB44Q7Z6P3 723 aaPredicted RBP11.71□□□□□ -0.53
CCDC7-208ENST00000537047 NOP53Q9NZM5 478 aaKnown RBP11.71□□□□□ -0.53
CCDC7-208ENST00000537047 MAFBQ9Y5Q3 323 aaPredicted RBP11.71□□□□□ -0.53
CCDC7-208ENST00000537047 RASA1P20936 1047 aa11.7□□□□□ -0.54
CCDC7-208ENST00000537047 POTEAQ6S8J7 498 aa11.7□□□□□ -0.54
CCDC7-208ENST00000537047 TRIM11Q96F44 468 aa11.7□□□□□ -0.54
CCDC7-208ENST00000537047 PPP1R12BO60237 982 aaPredicted RBP11.69□□□□□ -0.54
CCDC7-208ENST00000537047 MDFIQ99750 246 aa11.69□□□□□ -0.54
CCDC7-208ENST00000537047 M0R2N6 131 aa11.68□□□□□ -0.54
CCDC7-208ENST00000537047 TMEM132AQ24JP5 1023 aa11.68□□□□□ -0.54
CCDC7-208ENST00000537047 XP32Q5T750 250 aa11.68□□□□□ -0.54
CCDC7-208ENST00000537047 HIRAP54198 1017 aaPredicted RBP11.67□□□□□ -0.54
CCDC7-208ENST00000537047 C1orf53Q5VUE5 145 aa11.67□□□□□ -0.54
CCDC7-208ENST00000537047 SUSD3Q96L08 255 aa11.67□□□□□ -0.54
CCDC7-208ENST00000537047 CEP63Q96MT8 703 aa11.67□□□□□ -0.54
CCDC7-208ENST00000537047 ELOA3CA0A087WX78 387 aaPredicted RBP11.66□□□□□ -0.54
CCDC7-208ENST00000537047 ELOA3DA6NLF2 546 aaPredicted RBP11.66□□□□□ -0.54
CCDC7-208ENST00000537047 ELOA3BQ3SY89 546 aa11.66□□□□□ -0.54
CCDC7-208ENST00000537047 CRTC2Q53ET0 693 aaPredicted RBP11.66□□□□□ -0.54
CCDC7-208ENST00000537047 ELOA3Q8NG57 546 aa11.66□□□□□ -0.54
CCDC7-208ENST00000537047 CHMP7Q8WUX9 453 aaPredicted RBP11.66□□□□□ -0.54
CCDC7-208ENST00000537047 SCG3Q8WXD2 468 aaKnown RBP11.66□□□□□ -0.54
CCDC7-208ENST00000537047 BRD7Q9NPI1 651 aa11.66□□□□□ -0.54
CCDC7-208ENST00000537047 GPC6Q9Y625 555 aaPredicted RBP11.66□□□□□ -0.54
CCDC7-208ENST00000537047 ATAD2Q6PL18 1390 aa11.66□□□□□ -0.54
CCDC7-208ENST00000537047 SPEM2Q0P670 501 aa11.65□□□□□ -0.54
CCDC7-208ENST00000537047 ALDH16A1Q8IZ83 802 aa11.65□□□□□ -0.54
CCDC7-208ENST00000537047 NGLY1Q96IV0 654 aa11.65□□□□□ -0.54
CCDC7-208ENST00000537047 PLVAPQ9BX97 442 aa11.65□□□□□ -0.54
CCDC7-208ENST00000537047 SIN3BO75182 1162 aa11.64□□□□□ -0.55
CCDC7-208ENST00000537047 TYRO3Q06418 890 aa11.64□□□□□ -0.55
CCDC7-208ENST00000537047 C8orf86Q6ZUL3 223 aa11.64□□□□□ -0.55
CCDC7-208ENST00000537047 C2orf49Q9BVC5 232 aaPredicted RBP11.64□□□□□ -0.55
CCDC7-208ENST00000537047 CHMP3Q9Y3E7 222 aa11.64□□□□□ -0.55
CCDC7-208ENST00000537047 SEC13P55735 322 aa11.63□□□□□ -0.55
CCDC7-208ENST00000537047 KANK4Q5T7N3 995 aaPredicted RBP11.63□□□□□ -0.55
CCDC7-208ENST00000537047 PPP1R12CQ9BZL4 782 aa11.63□□□□□ -0.55
CCDC7-208ENST00000537047 STARD13Q9Y3M8 1113 aa11.63□□□□□ -0.55
CCDC7-208ENST00000537047 CALR3Q96L12 384 aaKnown RBP11.62□□□□□ -0.55
CCDC7-208ENST00000537047 RBM19Q9Y4C8 960 aaKnown RBP11.62□□□□□ -0.55
CCDC7-208ENST00000537047 ADARB2-AS1A8MUL3 147 aa11.61□□□□□ -0.55
CCDC7-208ENST00000537047 DPYDQ12882 1025 aa11.61□□□□□ -0.55
CCDC7-208ENST00000537047 PTK7Q13308 1070 aa11.61□□□□□ -0.55
CCDC7-208ENST00000537047 HINFPQ9BQA5 517 aa11.61□□□□□ -0.55
CCDC7-208ENST00000537047 ALAS2P22557 587 aa11.6□□□□□ -0.55
CCDC7-208ENST00000537047 COL9A3Q14050 684 aaPredicted RBP11.6□□□□□ -0.55
CCDC7-208ENST00000537047 ANKIB1Q9P2G1 1089 aa11.6□□□□□ -0.55
CCDC7-208ENST00000537047 KCNH4Q9UQ05 1017 aa11.6□□□□□ -0.55
CCDC7-208ENST00000537047 M0R082 166 aa11.59□□□□□ -0.55
CCDC7-208ENST00000537047 ALBP02768 609 aa11.59□□□□□ -0.55
CCDC7-208ENST00000537047 LARP1Q6PKG0 1096 aaKnown RBP11.59□□□□□ -0.55
CCDC7-208ENST00000537047 ZNF417Q8TAU3 575 aa11.59□□□□□ -0.55
CCDC7-208ENST00000537047 TNFRSF25Q93038 417 aa11.59□□□□□ -0.55
CCDC7-208ENST00000537047 ZNF587Q96SQ5 575 aaPredicted RBP11.59□□□□□ -0.55
CCDC7-208ENST00000537047 FAM229AH3BQW9 127 aa11.58□□□□□ -0.56
CCDC7-208ENST00000537047 SPATA31C1P0DKV0 1188 aa11.58□□□□□ -0.56
CCDC7-208ENST00000537047 ITGB7P26010 798 aa11.58□□□□□ -0.56
CCDC7-208ENST00000537047 LMOD1P29536 600 aaPredicted RBP11.58□□□□□ -0.56
CCDC7-208ENST00000537047 KCNQ4P56696 695 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms