RNA–Protein interactions for RNA: ENST00000537022.5

COPS7A-206, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 4

Gene COPS7A, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-206ENST00000537022 RTF1Q92541 710 aaKnown RBP18.3■□□□□ 0.52
COPS7A-206ENST00000537022 CNKSR1Q969H4 720 aa18.3■□□□□ 0.52
COPS7A-206ENST00000537022 USP16Q9Y5T5 823 aa18.3■□□□□ 0.52
COPS7A-206ENST00000537022 KDM3BQ7LBC6 1761 aa18.3■□□□□ 0.52
COPS7A-206ENST00000537022 HTATSF1O43719 755 aaKnown RBP18.29■□□□□ 0.52
COPS7A-206ENST00000537022 C21orf2O43822 256 aa18.29■□□□□ 0.52
COPS7A-206ENST00000537022 SNRPA1P09661 255 aaKnown RBP18.29■□□□□ 0.52
COPS7A-206ENST00000537022 U2AF1L5P0DN76 240 aaPredicted RBP18.29■□□□□ 0.52
COPS7A-206ENST00000537022 HTRA3P83110 453 aa18.29■□□□□ 0.52
COPS7A-206ENST00000537022 U2AF1Q01081 240 aaKnown RBP eCLIP18.29■□□□□ 0.52
COPS7A-206ENST00000537022 DPY19L2Q6NUT2 758 aa18.29■□□□□ 0.52
COPS7A-206ENST00000537022 NPHP1O15259 732 aa18.28■□□□□ 0.52
COPS7A-206ENST00000537022 SRGNP10124 158 aa18.28■□□□□ 0.52
COPS7A-206ENST00000537022 SOGA3Q5TF21 947 aa18.28■□□□□ 0.52
COPS7A-206ENST00000537022 CCDC24Q8N4L8 307 aa18.28■□□□□ 0.52
COPS7A-206ENST00000537022 ZNF652Q9Y2D9 606 aa18.28■□□□□ 0.52
COPS7A-206ENST00000537022 SCN4AP35499 1836 aa18.28■□□□□ 0.52
COPS7A-206ENST00000537022 ERFEQ4G0M1 354 aa18.27■□□□□ 0.52
COPS7A-206ENST00000537022 MCM10Q7L590 875 aa18.27■□□□□ 0.52
COPS7A-206ENST00000537022 MASTLQ96GX5 879 aa18.27■□□□□ 0.52
COPS7A-206ENST00000537022 TAOK3Q9H2K8 898 aa18.27■□□□□ 0.52
COPS7A-206ENST00000537022 NUP98P52948 1817 aa18.26■□□□□ 0.51
COPS7A-206ENST00000537022 PRAMEF22A3QJZ6 481 aa18.26■□□□□ 0.51
COPS7A-206ENST00000537022 POTECB2RU33 542 aa18.26■□□□□ 0.51
COPS7A-206ENST00000537022 PRPF40BQ6NWY9 871 aaKnown RBP18.26■□□□□ 0.51
COPS7A-206ENST00000537022 NBPF5PQ86XG9 351 aaPredicted RBP18.25■□□□□ 0.51
COPS7A-206ENST00000537022 ZNF219Q9P2Y4 722 aaPredicted RBP18.25■□□□□ 0.51
COPS7A-206ENST00000537022 PCNTO95613 3336 aa18.25■□□□□ 0.51
COPS7A-206ENST00000537022 PIP4K2AP48426 406 aaPredicted RBP18.24■□□□□ 0.51
COPS7A-206ENST00000537022 KLRG2A4D1S0 409 aaPredicted RBP18.23■□□□□ 0.51
COPS7A-206ENST00000537022 NBPF26B4DH59 902 aa18.23■□□□□ 0.51
COPS7A-206ENST00000537022 TAF7Q15545 349 aaPredicted RBP18.23■□□□□ 0.51
COPS7A-206ENST00000537022 NBPF10Q6P3W6 841 aaKnown RBP18.23■□□□□ 0.51
COPS7A-206ENST00000537022 NBPF15Q8N660 670 aa18.23■□□□□ 0.51
COPS7A-206ENST00000537022 NPR1P16066 1061 aa18.22■□□□□ 0.51
COPS7A-206ENST00000537022 DCTN1Q14203 1278 aa18.22■□□□□ 0.51
COPS7A-206ENST00000537022 TPTE2Q6XPS3 522 aa18.22■□□□□ 0.51
COPS7A-206ENST00000537022 C7orf43Q8WVR3 580 aa18.22■□□□□ 0.51
COPS7A-206ENST00000537022 NIP7Q9Y221 180 aaKnown RBP eCLIP18.21■□□□□ 0.51
COPS7A-206ENST00000537022 CCDC93Q567U6 631 aa18.2■□□□□ 0.5
COPS7A-206ENST00000537022 NEFMP07197 916 aa18.19■□□□□ 0.5
COPS7A-206ENST00000537022 PNISRQ8TF01 805 aaKnown RBP18.19■□□□□ 0.5
COPS7A-206ENST00000537022 DDNO94850 711 aaPredicted RBP18.18■□□□□ 0.5
COPS7A-206ENST00000537022 CHADLQ6NUI6 762 aa18.18■□□□□ 0.5
COPS7A-206ENST00000537022 L3MBTL3Q96JM7 780 aaPredicted RBP18.18■□□□□ 0.5
COPS7A-206ENST00000537022 IQCA1LA6NCM1 817 aa18.17■□□□□ 0.5
COPS7A-206ENST00000537022 FKBP4Q02790 459 aaKnown RBP eCLIP18.17■□□□□ 0.5
COPS7A-206ENST00000537022 RIC1Q4ADV7 1423 aa18.16■□□□□ 0.5
COPS7A-206ENST00000537022 ERVV-1B6SEH8 477 aa18.16■□□□□ 0.5
COPS7A-206ENST00000537022 ALDH1B1P30837 517 aa18.16■□□□□ 0.5
COPS7A-206ENST00000537022 HLFQ16534 295 aa18.16■□□□□ 0.5
COPS7A-206ENST00000537022 RTKN2Q8IZC4 609 aa18.16■□□□□ 0.5
COPS7A-206ENST00000537022 ADAMTSL1Q8N6G6 1762 aa18.16■□□□□ 0.5
COPS7A-206ENST00000537022 IBTKQ9P2D0 1353 aaPredicted RBP18.16■□□□□ 0.5
COPS7A-206ENST00000537022 COL13A1Q5TAT6 717 aaPredicted RBP18.15■□□□□ 0.5
COPS7A-206ENST00000537022 PLEKHF1Q96S99 279 aa18.15■□□□□ 0.5
COPS7A-206ENST00000537022 NYXQ9GZU5 481 aa18.15■□□□□ 0.5
COPS7A-206ENST00000537022 CREBZFQ9NS37 354 aa18.15■□□□□ 0.5
COPS7A-206ENST00000537022 MIS18AQ9NYP9 233 aa18.15■□□□□ 0.5
COPS7A-206ENST00000537022 SNED1Q8TER0 1413 aa18.15■□□□□ 0.5
COPS7A-206ENST00000537022 CRY2Q49AN0 593 aa18.14■□□□□ 0.49
COPS7A-206ENST00000537022 GTF2E1P29083 439 aaPredicted RBP18.13■□□□□ 0.49
COPS7A-206ENST00000537022 EIF4A1P60842 406 aaKnown RBP18.13■□□□□ 0.49
COPS7A-206ENST00000537022 NFE2L2Q16236 605 aa18.13■□□□□ 0.49
COPS7A-206ENST00000537022 LDHDQ86WU2 507 aa18.13■□□□□ 0.49
COPS7A-206ENST00000537022 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
COPS7A-206ENST00000537022 MAP3K15Q6ZN16 1313 aa18.13■□□□□ 0.49
COPS7A-206ENST00000537022 ANKRD36CQ5JPF3 1778 aa18.12■□□□□ 0.49
COPS7A-206ENST00000537022 FAM177BA6PVY3 158 aa18.12■□□□□ 0.49
COPS7A-206ENST00000537022 POTEIP0CG38 1075 aa18.12■□□□□ 0.49
COPS7A-206ENST00000537022 POTEJP0CG39 1038 aa18.12■□□□□ 0.49
COPS7A-206ENST00000537022 HSPA1AP0DMV8 641 aaKnown RBP18.12■□□□□ 0.49
COPS7A-206ENST00000537022 HSPA1BP0DMV9 641 aaKnown RBP18.12■□□□□ 0.49
COPS7A-206ENST00000537022 KIF6Q6ZMV9 814 aa18.12■□□□□ 0.49
COPS7A-206ENST00000537022 TAF1DQ9H5J8 278 aaPredicted RBP18.12■□□□□ 0.49
COPS7A-206ENST00000537022 ZNF277Q9NRM2 450 aaPredicted RBP18.12■□□□□ 0.49
COPS7A-206ENST00000537022 ERBB4Q15303 1308 aa18.12■□□□□ 0.49
COPS7A-206ENST00000537022 ABCC12Q96J65 1359 aa18.12■□□□□ 0.49
COPS7A-206ENST00000537022 CC2D2BQ6DHV5 1058 aa18.11■□□□□ 0.49
COPS7A-206ENST00000537022 PSMD1Q99460 953 aa18.11■□□□□ 0.49
COPS7A-206ENST00000537022 PASKQ96RG2 1323 aa18.11■□□□□ 0.49
COPS7A-206ENST00000537022 ZNF541Q9H0D2 1346 aa18.11■□□□□ 0.49
COPS7A-206ENST00000537022 IARSP41252 1262 aaKnown RBP18.1■□□□□ 0.49
COPS7A-206ENST00000537022 OLFM4Q6UX06 510 aa18.1■□□□□ 0.49
COPS7A-206ENST00000537022 MAPK8IP3Q9UPT6 1336 aa18.09■□□□□ 0.49
COPS7A-206ENST00000537022 FZD9O00144 591 aa18.09■□□□□ 0.49
COPS7A-206ENST00000537022 HOXA10P31260 410 aaPredicted RBP18.09■□□□□ 0.49
COPS7A-206ENST00000537022 GRIPAP1Q4V328 841 aa18.09■□□□□ 0.49
COPS7A-206ENST00000537022 TTLL7Q6ZT98 887 aa18.09■□□□□ 0.49
COPS7A-206ENST00000537022 SYNE4Q8N205 404 aa18.09■□□□□ 0.49
COPS7A-206ENST00000537022 NGEFQ8N5V2 710 aa18.09■□□□□ 0.49
COPS7A-206ENST00000537022 HACL1Q9UJ83 578 aa18.09■□□□□ 0.49
COPS7A-206ENST00000537022 RRP7AQ9Y3A4 280 aaKnown RBP18.09■□□□□ 0.49
COPS7A-206ENST00000537022 UBN2Q6ZU65 1347 aa18.08■□□□□ 0.49
COPS7A-206ENST00000537022 NUTM1Q86Y26 1132 aa18.08■□□□□ 0.48
COPS7A-206ENST00000537022 TNS4Q8IZW8 715 aa18.08■□□□□ 0.48
COPS7A-206ENST00000537022 LAMB2P55268 1798 aa18.07■□□□□ 0.48
COPS7A-206ENST00000537022 CNTNAP1P78357 1384 aa18.07■□□□□ 0.48
COPS7A-206ENST00000537022 MYL6BP14649 208 aa18.07■□□□□ 0.48
COPS7A-206ENST00000537022 ZNF34Q8IZ26 560 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms