RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 AIMP1Q12904 312 aaKnown RBP16.56■□□□□ 0.24
SMG6-203ENST00000536871 GSE1Q14687 1217 aa16.56■□□□□ 0.24
SMG6-203ENST00000536871 IL17RAQ96F46 866 aa16.56■□□□□ 0.24
SMG6-203ENST00000536871 LAMB4A4D0S4 1761 aa16.56■□□□□ 0.24
SMG6-203ENST00000536871 GCKRQ14397 625 aa16.56■□□□□ 0.24
SMG6-203ENST00000536871 CWF19L2Q2TBE0 894 aaKnown RBP16.56■□□□□ 0.24
SMG6-203ENST00000536871 PLBD2Q8NHP8 589 aa16.56■□□□□ 0.24
SMG6-203ENST00000536871 C5P01031 1676 aa16.55■□□□□ 0.24
SMG6-203ENST00000536871 G3BP1Q13283 466 aaKnown RBP eCLIP16.55■□□□□ 0.24
SMG6-203ENST00000536871 LRP10Q7Z4F1 713 aa16.55■□□□□ 0.24
SMG6-203ENST00000536871 RILPL2Q969X0 211 aa16.55■□□□□ 0.24
SMG6-203ENST00000536871 IL1RAPL2Q9NP60 686 aa16.55■□□□□ 0.24
SMG6-203ENST00000536871 MYL6BP14649 208 aa16.54■□□□□ 0.24
SMG6-203ENST00000536871 PI4K2BQ8TCG2 481 aa16.54■□□□□ 0.24
SMG6-203ENST00000536871 TEX13AQ9BXU3 409 aaPredicted RBP16.54■□□□□ 0.24
SMG6-203ENST00000536871 CWC22Q9HCG8 908 aaKnown RBP16.54■□□□□ 0.24
SMG6-203ENST00000536871 USP16Q9Y5T5 823 aa16.54■□□□□ 0.24
SMG6-203ENST00000536871 DDX11L8A8MPP1 907 aa16.54■□□□□ 0.24
SMG6-203ENST00000536871 IGKV5-2P06315 115 aa16.54■□□□□ 0.24
SMG6-203ENST00000536871 RUFY2Q8WXA3 655 aa16.54■□□□□ 0.24
SMG6-203ENST00000536871 TUBGCP6Q96RT7 1819 aa16.53■□□□□ 0.24
SMG6-203ENST00000536871 IFIT2P09913 472 aaKnown RBP16.53■□□□□ 0.24
SMG6-203ENST00000536871 SUCLG2Q96I99 432 aa16.53■□□□□ 0.24
SMG6-203ENST00000536871 ECHDC1Q9NTX5 307 aa16.53■□□□□ 0.24
SMG6-203ENST00000536871 HIP1O00291 1037 aa16.52■□□□□ 0.24
SMG6-203ENST00000536871 GBP4Q96PP9 640 aa16.52■□□□□ 0.24
SMG6-203ENST00000536871 MYD88Q99836 296 aa16.52■□□□□ 0.24
SMG6-203ENST00000536871 TNS2Q63HR2 1409 aa16.52■□□□□ 0.23
SMG6-203ENST00000536871 NUTM1Q86Y26 1132 aa16.52■□□□□ 0.23
SMG6-203ENST00000536871 BICC1Q9H694 974 aaKnown RBP16.52■□□□□ 0.23
SMG6-203ENST00000536871 MCM4P33991 863 aa16.51■□□□□ 0.23
SMG6-203ENST00000536871 VSIG10Q8N0Z9 540 aa16.51■□□□□ 0.23
SMG6-203ENST00000536871 RABL6Q3YEC7 729 aaPredicted RBP16.5■□□□□ 0.23
SMG6-203ENST00000536871 COPRSQ9NQ92 184 aa16.5■□□□□ 0.23
SMG6-203ENST00000536871 PAPPAQ13219 1627 aa16.5■□□□□ 0.23
SMG6-203ENST00000536871 UBR2Q8IWV8 1755 aa16.5■□□□□ 0.23
SMG6-203ENST00000536871 GLI3P10071 1580 aa16.5■□□□□ 0.23
SMG6-203ENST00000536871 NUCB2P80303 420 aa16.5■□□□□ 0.23
SMG6-203ENST00000536871 RAB3GAP1Q15042 981 aa16.5■□□□□ 0.23
SMG6-203ENST00000536871 EVI5LQ96CN4 794 aa16.5■□□□□ 0.23
SMG6-203ENST00000536871 KAZALD1Q96I82 304 aa16.5■□□□□ 0.23
SMG6-203ENST00000536871 SPRYD3Q8NCJ5 442 aa16.49■□□□□ 0.23
SMG6-203ENST00000536871 ANO2Q9NQ90 1003 aa16.49■□□□□ 0.23
SMG6-203ENST00000536871 STRN4Q9NRL3 753 aa16.49■□□□□ 0.23
SMG6-203ENST00000536871 AHDC1Q5TGY3 1603 aaPredicted RBP16.49■□□□□ 0.23
SMG6-203ENST00000536871 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
SMG6-203ENST00000536871 TSHZ3Q63HK5 1081 aa16.48■□□□□ 0.23
SMG6-203ENST00000536871 KIAA1211Q6ZU35 1233 aa16.48■□□□□ 0.23
SMG6-203ENST00000536871 TMOD3Q9NYL9 352 aa16.48■□□□□ 0.23
SMG6-203ENST00000536871 KCPQ6ZWJ8 1503 aa16.48■□□□□ 0.23
SMG6-203ENST00000536871 SGSM2O43147 1006 aa16.48■□□□□ 0.23
SMG6-203ENST00000536871 TICAM2Q86XR7 235 aa16.48■□□□□ 0.23
SMG6-203ENST00000536871 RBM42Q9BTD8 480 aaKnown RBP16.48■□□□□ 0.23
SMG6-203ENST00000536871 CDCA7Q9BWT1 371 aaPredicted RBP16.48■□□□□ 0.23
SMG6-203ENST00000536871 CLEC17AQ6ZS10 378 aa16.47■□□□□ 0.23
SMG6-203ENST00000536871 DDX54Q8TDD1 881 aaKnown RBP16.47■□□□□ 0.23
SMG6-203ENST00000536871 CD2BP2O95400 341 aaKnown RBP16.46■□□□□ 0.23
SMG6-203ENST00000536871 SKOR2Q2VWA4 1001 aaPredicted RBP16.46■□□□□ 0.23
SMG6-203ENST00000536871 AACSQ86V21 672 aa16.46■□□□□ 0.23
SMG6-203ENST00000536871 CCDC191Q8NCU4 936 aa16.46■□□□□ 0.23
SMG6-203ENST00000536871 DIAPH3Q9NSV4 1193 aa16.46■□□□□ 0.23
SMG6-203ENST00000536871 COL22A1Q8NFW1 1626 aaPredicted RBP16.46■□□□□ 0.23
SMG6-203ENST00000536871 RAD50Q92878 1312 aa16.46■□□□□ 0.22
SMG6-203ENST00000536871 A0A087WZG4 1122 aa16.46■□□□□ 0.22
SMG6-203ENST00000536871 GOLGA6L22H0YM25 854 aa16.46■□□□□ 0.22
SMG6-203ENST00000536871 HSPA4P34932 840 aa16.46■□□□□ 0.22
SMG6-203ENST00000536871 CWC25Q9NXE8 425 aaPredicted RBP16.46■□□□□ 0.22
SMG6-203ENST00000536871 H7C1W4 665 aa16.45■□□□□ 0.22
SMG6-203ENST00000536871 SASH1O94885 1247 aa16.45■□□□□ 0.22
SMG6-203ENST00000536871 UNC5CLQ8IV45 518 aa16.45■□□□□ 0.22
SMG6-203ENST00000536871 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
SMG6-203ENST00000536871 PA2G4Q9UQ80 394 aaKnown RBP16.45■□□□□ 0.22
SMG6-203ENST00000536871 LRP6O75581 1613 aa16.45■□□□□ 0.22
SMG6-203ENST00000536871 BTG4Q9NY30 223 aa16.44■□□□□ 0.22
SMG6-203ENST00000536871 ARFGEF2Q9Y6D5 1785 aa16.44■□□□□ 0.22
SMG6-203ENST00000536871 SHANK3Q9BYB0 1731 aa16.44■□□□□ 0.22
SMG6-203ENST00000536871 DISP2A7MBM2 1401 aa16.44■□□□□ 0.22
SMG6-203ENST00000536871 NBPF26B4DH59 902 aa16.44■□□□□ 0.22
SMG6-203ENST00000536871 STARD3NLO95772 234 aa16.44■□□□□ 0.22
SMG6-203ENST00000536871 NBPF14Q5TI25 921 aa16.44■□□□□ 0.22
SMG6-203ENST00000536871 NBPF10Q6P3W6 841 aaKnown RBP16.44■□□□□ 0.22
SMG6-203ENST00000536871 NBPF15Q8N660 670 aa16.44■□□□□ 0.22
SMG6-203ENST00000536871 RFX7Q2KHR2 1363 aa16.43■□□□□ 0.22
SMG6-203ENST00000536871 NEK4P51957 841 aa16.43■□□□□ 0.22
SMG6-203ENST00000536871 CASP7P55210 303 aa16.43■□□□□ 0.22
SMG6-203ENST00000536871 TRIM28Q13263 835 aaKnown RBP16.43■□□□□ 0.22
SMG6-203ENST00000536871 UBE3BQ7Z3V4 1068 aa16.43■□□□□ 0.22
SMG6-203ENST00000536871 TNPO1Q92973 898 aaKnown RBP16.43■□□□□ 0.22
SMG6-203ENST00000536871 INTS4Q96HW7 963 aaKnown RBP16.43■□□□□ 0.22
SMG6-203ENST00000536871 RFX5P48382 616 aaPredicted RBP16.42■□□□□ 0.22
SMG6-203ENST00000536871 FBXO3Q9UK99 471 aa16.42■□□□□ 0.22
SMG6-203ENST00000536871 PLCH1Q4KWH8 1693 aa16.42■□□□□ 0.22
SMG6-203ENST00000536871 EAF2Q96CJ1 260 aaPredicted RBP16.42■□□□□ 0.22
SMG6-203ENST00000536871 GPR108Q9NPR9 543 aa16.42■□□□□ 0.22
SMG6-203ENST00000536871 SNRKQ9NRH2 765 aa16.42■□□□□ 0.22
SMG6-203ENST00000536871 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
SMG6-203ENST00000536871 THRAP3Q9Y2W1 955 aaKnown RBP16.42■□□□□ 0.22
SMG6-203ENST00000536871 PTPN12Q05209 780 aaKnown RBP16.41■□□□□ 0.22
SMG6-203ENST00000536871 KIF6Q6ZMV9 814 aa16.4■□□□□ 0.22
SMG6-203ENST00000536871 LSG1Q9H089 658 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms