RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 ATP6V1AP38606 617 aa16.19■□□□□ 0.18
CDK5RAP3-202ENST00000536708 INTS3Q68E01 1043 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-202ENST00000536708 COPS6Q7L5N1 327 aa16.19■□□□□ 0.18
CDK5RAP3-202ENST00000536708 IL27Q8NEV9 243 aa16.19■□□□□ 0.18
CDK5RAP3-202ENST00000536708 C1orf115Q9H7X2 142 aa16.19■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ZBTB1Q9Y2K1 713 aa16.18■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ILDR1Q86SU0 546 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-202ENST00000536708 CHMP4AQ9BY43 222 aa16.18■□□□□ 0.18
CDK5RAP3-202ENST00000536708 MAP3K2Q9Y2U5 619 aa16.18■□□□□ 0.18
CDK5RAP3-202ENST00000536708 TRIM37O94972 964 aa16.17■□□□□ 0.18
CDK5RAP3-202ENST00000536708 TTLL7Q6ZT98 887 aa16.17■□□□□ 0.18
CDK5RAP3-202ENST00000536708 DNAAF4Q8WXU2 420 aa16.17■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ERBB4Q15303 1308 aa16.17■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ANKRD36CQ5JPF3 1778 aa16.17■□□□□ 0.18
CDK5RAP3-202ENST00000536708 MEIS3Q99687 375 aa16.17■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ZBTB40Q9NUA8 1239 aa16.17■□□□□ 0.18
CDK5RAP3-202ENST00000536708 NUP98P52948 1817 aa16.16■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ZBTB7BO15156 539 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-202ENST00000536708 FAM196AQ6ZSG2 479 aa16.16■□□□□ 0.18
CDK5RAP3-202ENST00000536708 SMARCC1Q92922 1105 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-202ENST00000536708 SEC24BO95487 1268 aa16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 STARD3NLO95772 234 aa16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 LINC00116Q8NCU8 138 aa16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 C4BP0C0L5 1744 aa16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 BCORQ6W2J9 1755 aa16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 CRKLP46109 303 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 SLC4A3P48751 1232 aa16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 CWF19L2Q2TBE0 894 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 KSR2Q6VAB6 950 aa16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 TEX13AQ9BXU3 409 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 BCL11BQ9C0K0 894 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ATP10DQ9P241 1426 aa16.14■□□□□ 0.17
CDK5RAP3-202ENST00000536708 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
CDK5RAP3-202ENST00000536708 CCT4P50991 539 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-202ENST00000536708 BEND3Q5T5X7 828 aa16.14■□□□□ 0.17
CDK5RAP3-202ENST00000536708 SMC5Q8IY18 1101 aa16.14■□□□□ 0.17
CDK5RAP3-202ENST00000536708 ZBTB3Q9H5J0 574 aa16.14■□□□□ 0.17
CDK5RAP3-202ENST00000536708 NFKBIBQ15653 356 aa16.13■□□□□ 0.17
CDK5RAP3-202ENST00000536708 RIC3Q7Z5B4 369 aa16.13■□□□□ 0.17
CDK5RAP3-202ENST00000536708 INTS5Q6P9B9 1019 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-202ENST00000536708 SMIM5Q71RC9 77 aa16.13■□□□□ 0.17
CDK5RAP3-202ENST00000536708 DDX58O95786 925 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-202ENST00000536708 ANKRD13DQ6ZTN6 518 aa16.12■□□□□ 0.17
CDK5RAP3-202ENST00000536708 SRCIN1Q9C0H9 1055 aa16.12■□□□□ 0.17
CDK5RAP3-202ENST00000536708 CCDC87Q9NVE4 849 aa16.12■□□□□ 0.17
CDK5RAP3-202ENST00000536708 CCNL1Q9UK58 526 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP3-202ENST00000536708 UBR3Q6ZT12 1888 aa16.12■□□□□ 0.17
CDK5RAP3-202ENST00000536708 TBC1D32Q96NH3 1257 aa16.11■□□□□ 0.17
CDK5RAP3-202ENST00000536708 SCN7AQ01118 1682 aa16.11■□□□□ 0.17
CDK5RAP3-202ENST00000536708 IGKV5-2P06315 115 aa16.11■□□□□ 0.17
CDK5RAP3-202ENST00000536708 MYD88Q99836 296 aa16.11■□□□□ 0.17
CDK5RAP3-202ENST00000536708 TUBGCP6Q96RT7 1819 aa16.11■□□□□ 0.17
CDK5RAP3-202ENST00000536708 BECN1Q14457 450 aa16.1■□□□□ 0.17
CDK5RAP3-202ENST00000536708 ARXQ96QS3 562 aa16.1■□□□□ 0.17
CDK5RAP3-202ENST00000536708 CHMP4BQ9H444 224 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-202ENST00000536708 UPF2Q9HAU5 1272 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-202ENST00000536708 LRRC4BQ9NT99 713 aa16.1■□□□□ 0.17
CDK5RAP3-202ENST00000536708 ATP5J2-PTCD1G3V325 749 aa16.09■□□□□ 0.17
CDK5RAP3-202ENST00000536708 AMIGO3Q86WK7 504 aa16.09■□□□□ 0.17
CDK5RAP3-202ENST00000536708 PLBD2Q8NHP8 589 aa16.09■□□□□ 0.17
CDK5RAP3-202ENST00000536708 USP44Q9H0E7 712 aa16.09■□□□□ 0.17
CDK5RAP3-202ENST00000536708 ANO8Q9HCE9 1232 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-202ENST00000536708 NBPF7P0C2Y1 421 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-202ENST00000536708 METTL22Q9BUU2 404 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-202ENST00000536708 COL15A1P39059 1388 aa16.08■□□□□ 0.17
CDK5RAP3-202ENST00000536708 RGPD3A6NKT7 1758 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-202ENST00000536708 RGPD4Q7Z3J3 1758 aa16.08■□□□□ 0.16
CDK5RAP3-202ENST00000536708 IL6STP40189 918 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 EIF5P55010 431 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 SIRT2Q8IXJ6 389 aa16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 LINS1Q8NG48 757 aa16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 TBC1D2BQ9UPU7 963 aa16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 NEURL1BA8MQ27 555 aa16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 HLFQ16534 295 aa16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 CNTNAP4Q9C0A0 1308 aa16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 KIF6Q6ZMV9 814 aa16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 DZIP3Q86Y13 1208 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 JARID2Q92833 1246 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 LRRFIP2Q9Y608 721 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 MAP3K15Q6ZN16 1313 aa16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 PRKCSHP14314 528 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 NEXNQ0ZGT2 675 aa16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 GSE1Q14687 1217 aa16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 CASZ1Q86V15 1759 aa16.05■□□□□ 0.16
CDK5RAP3-202ENST00000536708 GNPATO15228 680 aa16.05■□□□□ 0.16
CDK5RAP3-202ENST00000536708 ALDH1L1O75891 902 aa16.05■□□□□ 0.16
CDK5RAP3-202ENST00000536708 UBTFL1P0CB47 393 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-202ENST00000536708 NUCB1Q02818 461 aa16.05■□□□□ 0.16
CDK5RAP3-202ENST00000536708 CEP85Q6P2H3 762 aa16.05■□□□□ 0.16
CDK5RAP3-202ENST00000536708 PROM2Q8N271 834 aa16.04■□□□□ 0.16
CDK5RAP3-202ENST00000536708 APBA3O96018 575 aa16.04■□□□□ 0.16
CDK5RAP3-202ENST00000536708 GCKRQ14397 625 aa16.04■□□□□ 0.16
CDK5RAP3-202ENST00000536708 GRM8O00222 908 aa16.03■□□□□ 0.16
CDK5RAP3-202ENST00000536708 GNAI2P04899 355 aa16.03■□□□□ 0.16
CDK5RAP3-202ENST00000536708 GNAI3P08754 354 aa16.03■□□□□ 0.16
CDK5RAP3-202ENST00000536708 GPTP24298 496 aa16.03■□□□□ 0.16
CDK5RAP3-202ENST00000536708 C9orf78Q9NZ63 289 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-202ENST00000536708 MYH3P11055 1940 aa16.03■□□□□ 0.16
CDK5RAP3-202ENST00000536708 TXNRD1Q16881 649 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms