RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 C8orf34Q49A92 452 aa10.03□□□□□ -0.8
ABCA4-207ENST00000536513 ARHGAP45Q92619 1136 aa10.03□□□□□ -0.8
ABCA4-207ENST00000536513 TRMT112Q9UI30 125 aaKnown RBP10.03□□□□□ -0.8
ABCA4-207ENST00000536513 SHPRHQ149N8 1683 aa10.03□□□□□ -0.8
ABCA4-207ENST00000536513 CRB1P82279 1406 aa10.03□□□□□ -0.8
ABCA4-207ENST00000536513 CLASRPQ8N2M8 674 aaKnown RBP10.03□□□□□ -0.8
ABCA4-207ENST00000536513 FAM13BQ9NYF5 915 aa10.03□□□□□ -0.8
ABCA4-207ENST00000536513 IQSEC3Q9UPP2 1182 aaPredicted RBP10.03□□□□□ -0.8
ABCA4-207ENST00000536513 ZBTB1Q9Y2K1 713 aa10.03□□□□□ -0.8
ABCA4-207ENST00000536513 UTRNP46939 3433 aa10.03□□□□□ -0.8
ABCA4-207ENST00000536513 HCLS1P14317 486 aaPredicted RBP10.03□□□□□ -0.8
ABCA4-207ENST00000536513 RPAP2Q8IXW5 612 aaPredicted RBP10.03□□□□□ -0.8
ABCA4-207ENST00000536513 BBXQ8WY36 941 aaPredicted RBP10.03□□□□□ -0.8
ABCA4-207ENST00000536513 GCC1Q96CN9 775 aa10.03□□□□□ -0.8
ABCA4-207ENST00000536513 SUCLG2Q96I99 432 aa10.03□□□□□ -0.8
ABCA4-207ENST00000536513 C22orf23Q9BZE7 217 aa10.03□□□□□ -0.8
ABCA4-207ENST00000536513 MEGF6O75095 1541 aa10.02□□□□□ -0.8
ABCA4-207ENST00000536513 KDRP35968 1356 aa10.02□□□□□ -0.8
ABCA4-207ENST00000536513 GRM8O00222 908 aa10.02□□□□□ -0.81
ABCA4-207ENST00000536513 INTS3Q68E01 1043 aaKnown RBP10.02□□□□□ -0.81
ABCA4-207ENST00000536513 ANKRD44Q8N8A2 993 aa10.02□□□□□ -0.81
ABCA4-207ENST00000536513 CHMP4CQ96CF2 233 aa10.02□□□□□ -0.81
ABCA4-207ENST00000536513 CWC27Q6UX04 472 aaKnown RBP10.02□□□□□ -0.81
ABCA4-207ENST00000536513 PTMAP06454 111 aaKnown RBP10.02□□□□□ -0.81
ABCA4-207ENST00000536513 EDC3Q96F86 508 aaKnown RBP10.02□□□□□ -0.81
ABCA4-207ENST00000536513 ABCC4O15439 1325 aa10.01□□□□□ -0.81
ABCA4-207ENST00000536513 NUCB1Q02818 461 aa10.01□□□□□ -0.81
ABCA4-207ENST00000536513 ZNF219Q9P2Y4 722 aaPredicted RBP10.01□□□□□ -0.81
ABCA4-207ENST00000536513 EP400Q96L91 3159 aa10.01□□□□□ -0.81
ABCA4-207ENST00000536513 PIK3C2AO00443 1686 aa10.01□□□□□ -0.81
ABCA4-207ENST00000536513 PPP1R1BQ9UD71 204 aaPredicted RBP10.01□□□□□ -0.81
ABCA4-207ENST00000536513 FKBP4Q02790 459 aaKnown RBP eCLIP10□□□□□ -0.81
ABCA4-207ENST00000536513 RTL1A6NKG5 1358 aa10□□□□□ -0.81
ABCA4-207ENST00000536513 HSP90AB3PQ58FF7 597 aa10□□□□□ -0.81
ABCA4-207ENST00000536513 CNNM1Q9NRU3 951 aa10□□□□□ -0.81
ABCA4-207ENST00000536513 SOS1Q07889 1333 aaPredicted RBP10□□□□□ -0.81
ABCA4-207ENST00000536513 PEAK1Q9H792 1746 aa10□□□□□ -0.81
ABCA4-207ENST00000536513 NBPF26B4DH59 902 aa10□□□□□ -0.81
ABCA4-207ENST00000536513 SNAP23O00161 211 aa10□□□□□ -0.81
ABCA4-207ENST00000536513 PPFIA3O75145 1194 aa10□□□□□ -0.81
ABCA4-207ENST00000536513 TIMM10P62072 90 aa10□□□□□ -0.81
ABCA4-207ENST00000536513 RBM10P98175 930 aaKnown RBP10□□□□□ -0.81
ABCA4-207ENST00000536513 HDAC1Q13547 482 aaPredicted RBP10□□□□□ -0.81
ABCA4-207ENST00000536513 NBPF14Q5TI25 921 aa10□□□□□ -0.81
ABCA4-207ENST00000536513 NBPF10Q6P3W6 841 aaKnown RBP10□□□□□ -0.81
ABCA4-207ENST00000536513 DZIP3Q86Y13 1208 aaKnown RBP10□□□□□ -0.81
ABCA4-207ENST00000536513 NBPF15Q8N660 670 aa10□□□□□ -0.81
ABCA4-207ENST00000536513 QTRT2Q9H974 415 aaKnown RBP10□□□□□ -0.81
ABCA4-207ENST00000536513 JAG2Q9Y219 1238 aa10□□□□□ -0.81
ABCA4-207ENST00000536513 CHD2O14647 1828 aaKnown RBP10□□□□□ -0.81
ABCA4-207ENST00000536513 GOLGA6L22H0YM25 854 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 KDM4AO75164 1064 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 MX1P20591 662 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 BEND3Q5T5X7 828 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 SMC5Q8IY18 1101 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 CCDC57Q2TAC2 916 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 EPHA10Q5JZY3 1008 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 KIAA1211Q6ZU35 1233 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 LINS1Q8NG48 757 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 CERKQ8TCT0 537 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 RHPN1Q8TCX5 695 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 TRIM37O94972 964 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 SDSP20132 328 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 HLFQ16534 295 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 TBC1D9Q6ZT07 1266 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 MARCH10Q8NA82 808 aaPredicted RBP9.99□□□□□ -0.81
ABCA4-207ENST00000536513 UPF3BQ9BZI7 483 aaKnown RBP9.99□□□□□ -0.81
ABCA4-207ENST00000536513 DIAPH3Q9NSV4 1193 aa9.99□□□□□ -0.81
ABCA4-207ENST00000536513 ZNF526Q8TF50 670 aaPredicted RBP9.98□□□□□ -0.81
ABCA4-207ENST00000536513 FSD1Q9BTV5 496 aa9.98□□□□□ -0.81
ABCA4-207ENST00000536513 ATG3Q9NT62 314 aa9.98□□□□□ -0.81
ABCA4-207ENST00000536513 GNPATO15228 680 aa9.98□□□□□ -0.81
ABCA4-207ENST00000536513 ATP8B2P98198 1209 aa9.98□□□□□ -0.81
ABCA4-207ENST00000536513 PLEKHM2Q8IWE5 1019 aa9.98□□□□□ -0.81
ABCA4-207ENST00000536513 DCTPP1Q9H773 170 aa9.98□□□□□ -0.81
ABCA4-207ENST00000536513 NIP7Q9Y221 180 aaKnown RBP eCLIP9.98□□□□□ -0.81
ABCA4-207ENST00000536513 RRP9O43818 475 aaKnown RBP9.98□□□□□ -0.81
ABCA4-207ENST00000536513 IGKV5-2P06315 115 aa9.98□□□□□ -0.81
ABCA4-207ENST00000536513 HSCBQ8IWL3 235 aa9.98□□□□□ -0.81
ABCA4-207ENST00000536513 CWC25Q9NXE8 425 aaPredicted RBP9.98□□□□□ -0.81
ABCA4-207ENST00000536513 GCKRQ14397 625 aa9.97□□□□□ -0.81
ABCA4-207ENST00000536513 AFF2P51816 1311 aa9.97□□□□□ -0.81
ABCA4-207ENST00000536513 XRN1Q8IZH2 1706 aaKnown RBP9.97□□□□□ -0.81
ABCA4-207ENST00000536513 NEURL1BA8MQ27 555 aa9.97□□□□□ -0.81
ABCA4-207ENST00000536513 DDX46Q7L014 1031 aaKnown RBP9.97□□□□□ -0.81
ABCA4-207ENST00000536513 LOC102724428A0A0B4J2F2 783 aa9.96□□□□□ -0.81
ABCA4-207ENST00000536513 CDC45O75419 566 aa9.96□□□□□ -0.81
ABCA4-207ENST00000536513 PDE1AP54750 535 aa9.96□□□□□ -0.81
ABCA4-207ENST00000536513 SIK1P57059 783 aa9.96□□□□□ -0.81
ABCA4-207ENST00000536513 UNC5CLQ8IV45 518 aa9.96□□□□□ -0.81
ABCA4-207ENST00000536513 SLC4A8Q2Y0W8 1093 aa9.96□□□□□ -0.81
ABCA4-207ENST00000536513 FBXW7Q969H0 707 aa9.96□□□□□ -0.81
ABCA4-207ENST00000536513 TCEANC2Q96MN5 208 aa9.96□□□□□ -0.81
ABCA4-207ENST00000536513 TLR7Q9NYK1 1049 aaKnown RBP9.96□□□□□ -0.81
ABCA4-207ENST00000536513 FOSBP53539 338 aa9.96□□□□□ -0.82
ABCA4-207ENST00000536513 TFCP2Q12800 502 aa9.96□□□□□ -0.82
ABCA4-207ENST00000536513 WASHC4Q2M389 1173 aa9.96□□□□□ -0.82
ABCA4-207ENST00000536513 SLFNL1Q499Z3 407 aa9.96□□□□□ -0.82
ABCA4-207ENST00000536513 LDHAL6AQ6ZMR3 332 aa9.96□□□□□ -0.82
ABCA4-207ENST00000536513 METTL22Q9BUU2 404 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms