RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 LRP10Q7Z4F1 713 aa18.64■□□□□ 0.57
UBE3B-206ENST00000536398 C2CD5Q86YS7 1000 aa18.64■□□□□ 0.57
UBE3B-206ENST00000536398 CFAP44Q96MT7 982 aa18.64■□□□□ 0.57
UBE3B-206ENST00000536398 BCORQ6W2J9 1755 aa18.63■□□□□ 0.57
UBE3B-206ENST00000536398 FAM177BA6PVY3 158 aa18.63■□□□□ 0.57
UBE3B-206ENST00000536398 ZNF853P0CG23 659 aa18.63■□□□□ 0.57
UBE3B-206ENST00000536398 ARHGAP27Q6ZUM4 889 aa18.63■□□□□ 0.57
UBE3B-206ENST00000536398 MBIPQ9NS73 344 aa18.63■□□□□ 0.57
UBE3B-206ENST00000536398 NIP7Q9Y221 180 aaKnown RBP eCLIP18.63■□□□□ 0.57
UBE3B-206ENST00000536398 ZNF652Q9Y2D9 606 aa18.63■□□□□ 0.57
UBE3B-206ENST00000536398 ZBTB3Q9H5J0 574 aa18.62■□□□□ 0.57
UBE3B-206ENST00000536398 ERBB4Q15303 1308 aa18.61■□□□□ 0.57
UBE3B-206ENST00000536398 MAP3K15Q6ZN16 1313 aa18.61■□□□□ 0.57
UBE3B-206ENST00000536398 NBPF5PQ86XG9 351 aaPredicted RBP18.61■□□□□ 0.57
UBE3B-206ENST00000536398 CNBD1Q8NA66 436 aa18.61■□□□□ 0.57
UBE3B-206ENST00000536398 BRIP1Q9BX63 1249 aa18.61■□□□□ 0.57
UBE3B-206ENST00000536398 BRCA1P38398 1863 aaKnown RBP18.6■□□□□ 0.57
UBE3B-206ENST00000536398 ERVV-1B6SEH8 477 aa18.6■□□□□ 0.57
UBE3B-206ENST00000536398 H0YIN7 160 aa18.6■□□□□ 0.57
UBE3B-206ENST00000536398 KIF6Q6ZMV9 814 aa18.6■□□□□ 0.57
UBE3B-206ENST00000536398 RGL2O15211 777 aa18.59■□□□□ 0.57
UBE3B-206ENST00000536398 NPHP1O15259 732 aa18.59■□□□□ 0.57
UBE3B-206ENST00000536398 IFT57Q9NWB7 429 aa18.59■□□□□ 0.57
UBE3B-206ENST00000536398 GPTP24298 496 aa18.58■□□□□ 0.56
UBE3B-206ENST00000536398 PDE6BP35913 854 aa18.58■□□□□ 0.56
UBE3B-206ENST00000536398 ST5P78524 1137 aa18.58■□□□□ 0.56
UBE3B-206ENST00000536398 DUSP27Q5VZP5 1158 aa18.58■□□□□ 0.56
UBE3B-206ENST00000536398 ZNF622Q969S3 477 aaKnown RBP eCLIP18.58■□□□□ 0.56
UBE3B-206ENST00000536398 ANKRD31Q8N7Z5 1873 aa18.58■□□□□ 0.56
UBE3B-206ENST00000536398 ELL2O00472 640 aaPredicted RBP18.57■□□□□ 0.56
UBE3B-206ENST00000536398 GNAI1P63096 354 aa18.57■□□□□ 0.56
UBE3B-206ENST00000536398 AIMP1Q12904 312 aaKnown RBP18.57■□□□□ 0.56
UBE3B-206ENST00000536398 COPS6Q7L5N1 327 aa18.57■□□□□ 0.56
UBE3B-206ENST00000536398 TTLL6Q8N841 843 aa18.57■□□□□ 0.56
UBE3B-206ENST00000536398 XAGE3Q8WTP9 111 aa18.57■□□□□ 0.56
UBE3B-206ENST00000536398 CHPF2Q9P2E5 772 aa18.57■□□□□ 0.56
UBE3B-206ENST00000536398 SALL2Q9Y467 1007 aaPredicted RBP18.57■□□□□ 0.56
UBE3B-206ENST00000536398 HDGFL1Q5TGJ6 251 aa18.56■□□□□ 0.56
UBE3B-206ENST00000536398 TPTE2Q6XPS3 522 aa18.56■□□□□ 0.56
UBE3B-206ENST00000536398 WWC1Q8IX03 1113 aa18.56■□□□□ 0.56
UBE3B-206ENST00000536398 FAM9BQ8IZU0 186 aa18.56■□□□□ 0.56
UBE3B-206ENST00000536398 DDX21Q9NR30 783 aaKnown RBP eCLIP18.56■□□□□ 0.56
UBE3B-206ENST00000536398 UBN2Q6ZU65 1347 aa18.55■□□□□ 0.56
UBE3B-206ENST00000536398 CALD1Q05682 793 aaKnown RBP18.55■□□□□ 0.56
UBE3B-206ENST00000536398 SUSD4Q5VX71 490 aa18.55■□□□□ 0.56
UBE3B-206ENST00000536398 GIGYF2Q6Y7W6 1299 aaKnown RBP18.55■□□□□ 0.56
UBE3B-206ENST00000536398 NUTM1Q86Y26 1132 aa18.55■□□□□ 0.56
UBE3B-206ENST00000536398 ZNF34Q8IZ26 560 aa18.55■□□□□ 0.56
UBE3B-206ENST00000536398 C8orf58Q8NAV2 365 aa18.55■□□□□ 0.56
UBE3B-206ENST00000536398 ZNF219Q9P2Y4 722 aaPredicted RBP18.55■□□□□ 0.56
UBE3B-206ENST00000536398 ATP10DQ9P241 1426 aa18.55■□□□□ 0.56
UBE3B-206ENST00000536398 ADCY9O60503 1353 aa18.55■□□□□ 0.56
UBE3B-206ENST00000536398 HOXB7P09629 217 aa18.54■□□□□ 0.56
UBE3B-206ENST00000536398 SRGNP10124 158 aa18.54■□□□□ 0.56
UBE3B-206ENST00000536398 CCDC27Q2M243 656 aa18.54■□□□□ 0.56
UBE3B-206ENST00000536398 ZNF526Q8TF50 670 aaPredicted RBP18.54■□□□□ 0.56
UBE3B-206ENST00000536398 TSR2Q969E8 191 aaKnown RBP18.54■□□□□ 0.56
UBE3B-206ENST00000536398 COL11A2P13942 1736 aaPredicted RBP18.53■□□□□ 0.56
UBE3B-206ENST00000536398 ERFEQ4G0M1 354 aa18.53■□□□□ 0.56
UBE3B-206ENST00000536398 TSPYL6Q8N831 410 aa18.53■□□□□ 0.56
UBE3B-206ENST00000536398 NUP98P52948 1817 aa18.53■□□□□ 0.56
UBE3B-206ENST00000536398 ARFGEF1Q9Y6D6 1849 aa18.52■□□□□ 0.56
UBE3B-206ENST00000536398 GTF2E1P29083 439 aaPredicted RBP18.52■□□□□ 0.56
UBE3B-206ENST00000536398 RASSF7Q02833 373 aa18.52■□□□□ 0.56
UBE3B-206ENST00000536398 C9orf131Q5VYM1 1079 aa18.52■□□□□ 0.56
UBE3B-206ENST00000536398 ZNF428Q96B54 188 aa18.52■□□□□ 0.56
UBE3B-206ENST00000536398 PDZRN3Q9UPQ7 1066 aa18.52■□□□□ 0.56
UBE3B-206ENST00000536398 DLEC1Q9Y238 1755 aa18.52■□□□□ 0.55
UBE3B-206ENST00000536398 ABCC12Q96J65 1359 aa18.52■□□□□ 0.55
UBE3B-206ENST00000536398 KLRG2A4D1S0 409 aaPredicted RBP18.51■□□□□ 0.55
UBE3B-206ENST00000536398 C21orf2O43822 256 aa18.51■□□□□ 0.55
UBE3B-206ENST00000536398 PRELPP51888 382 aa18.51■□□□□ 0.55
UBE3B-206ENST00000536398 STYK1Q6J9G0 422 aa18.51■□□□□ 0.55
UBE3B-206ENST00000536398 MASTLQ96GX5 879 aa18.51■□□□□ 0.55
UBE3B-206ENST00000536398 DBF4Q9UBU7 674 aaPredicted RBP18.51■□□□□ 0.55
UBE3B-206ENST00000536398 NTSR2O95665 410 aa18.5■□□□□ 0.55
UBE3B-206ENST00000536398 NYXQ9GZU5 481 aa18.5■□□□□ 0.55
UBE3B-206ENST00000536398 PRPF40BQ6NWY9 871 aaKnown RBP18.49■□□□□ 0.55
UBE3B-206ENST00000536398 C3orf67Q6ZVT6 689 aa18.49■□□□□ 0.55
UBE3B-206ENST00000536398 CNKSR1Q969H4 720 aa18.49■□□□□ 0.55
UBE3B-206ENST00000536398 NFKBIEO00221 500 aa18.48■□□□□ 0.55
UBE3B-206ENST00000536398 TCIRG1Q13488 830 aa18.48■□□□□ 0.55
UBE3B-206ENST00000536398 PHAXQ9H814 394 aaKnown RBP18.48■□□□□ 0.55
UBE3B-206ENST00000536398 RNF181Q9P0P0 153 aa18.48■□□□□ 0.55
UBE3B-206ENST00000536398 NPR1P16066 1061 aa18.47■□□□□ 0.55
UBE3B-206ENST00000536398 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
UBE3B-206ENST00000536398 PARP10Q53GL7 1025 aa18.47■□□□□ 0.55
UBE3B-206ENST00000536398 ANKRD13DQ6ZTN6 518 aa18.47■□□□□ 0.55
UBE3B-206ENST00000536398 NLRP10Q86W26 655 aa18.47■□□□□ 0.55
UBE3B-206ENST00000536398 SYNE4Q8N205 404 aa18.47■□□□□ 0.55
UBE3B-206ENST00000536398 PLBD2Q8NHP8 589 aa18.47■□□□□ 0.55
UBE3B-206ENST00000536398 GPBP1L1Q9HC44 474 aaPredicted RBP18.47■□□□□ 0.55
UBE3B-206ENST00000536398 HYPKQ9NX55 129 aa18.47■□□□□ 0.55
UBE3B-206ENST00000536398 SLX4Q8IY92 1834 aa18.46■□□□□ 0.55
UBE3B-206ENST00000536398 TCERG1O14776 1098 aaKnown RBP18.46■□□□□ 0.55
UBE3B-206ENST00000536398 OLFM4Q6UX06 510 aa18.46■□□□□ 0.55
UBE3B-206ENST00000536398 PPP1R42Q7Z4L9 355 aa18.46■□□□□ 0.55
UBE3B-206ENST00000536398 UTP14AQ9BVJ6 771 aaKnown RBP18.46■□□□□ 0.55
UBE3B-206ENST00000536398 SPINK5Q9NQ38 1064 aaPredicted RBP18.46■□□□□ 0.55
UBE3B-206ENST00000536398 IBTKQ9P2D0 1353 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms