RNA–Protein interactions for RNA: ENST00000536287.2

RHBDL3-203, Transcript of rhomboid like 3, humanhuman

TSL 2 BASIC

Gene RHBDL3, Length 4,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-203ENST00000536287 PIK3R4Q99570 1358 aa13.91□□□□□ -0.18
RHBDL3-203ENST00000536287 PPP4R3BQ5MIZ7 849 aa13.91□□□□□ -0.18
RHBDL3-203ENST00000536287 UBE3BQ7Z3V4 1068 aa13.91□□□□□ -0.18
RHBDL3-203ENST00000536287 CCDC191Q8NCU4 936 aa13.91□□□□□ -0.18
RHBDL3-203ENST00000536287 CNNM3Q8NE01 707 aa13.91□□□□□ -0.18
RHBDL3-203ENST00000536287 GSDMDP57764 484 aa13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 STX1AQ16623 288 aa13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 TMC6Q7Z403 805 aa13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 BRF1Q92994 677 aa13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 SNRKQ9NRH2 765 aa13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 USP16Q9Y5T5 823 aa13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 CCDC196A0A1B0GTZ2 297 aa13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 KIAA0754O94854 1291 aa13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 CAVIN2O95810 425 aa13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 NOLC1Q14978 699 aaKnown RBP eCLIP13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 ORC3Q9UBD5 711 aaPredicted RBP13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 POLKQ9UBT6 870 aa13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 NUP160Q12769 1436 aa13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 POLR3DP05423 398 aaPredicted RBP13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 IFIT5Q13325 482 aaKnown RBP13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 ACEP12821 1306 aa13.9□□□□□ -0.18
RHBDL3-203ENST00000536287 BMP2KQ9NSY1 1161 aaPredicted RBP13.9□□□□□ -0.19
RHBDL3-203ENST00000536287 CGNQ9P2M7 1197 aaKnown RBP13.9□□□□□ -0.19
RHBDL3-203ENST00000536287 SPDYE4A6NLX3 237 aa13.89□□□□□ -0.19
RHBDL3-203ENST00000536287 ATP5J2-PTCD1G3V325 749 aa13.89□□□□□ -0.19
RHBDL3-203ENST00000536287 KIF5CO60282 957 aa13.89□□□□□ -0.19
RHBDL3-203ENST00000536287 STARD3NLO95772 234 aa13.89□□□□□ -0.19
RHBDL3-203ENST00000536287 HAND2P61296 217 aa13.89□□□□□ -0.19
RHBDL3-203ENST00000536287 PIK3C2GO75747 1445 aa13.89□□□□□ -0.19
RHBDL3-203ENST00000536287 SYCP1Q15431 976 aa13.89□□□□□ -0.19
RHBDL3-203ENST00000536287 KRT24Q2M2I5 525 aa13.89□□□□□ -0.19
RHBDL3-203ENST00000536287 CCDC186Q7Z3E2 898 aa13.89□□□□□ -0.19
RHBDL3-203ENST00000536287 CPLX3Q8WVH0 158 aa13.89□□□□□ -0.19
RHBDL3-203ENST00000536287 CRACR2AQ9BSW2 395 aa13.89□□□□□ -0.19
RHBDL3-203ENST00000536287 IGHMBP2P38935 993 aaKnown RBP13.89□□□□□ -0.19
RHBDL3-203ENST00000536287 TXLNBQ8N3L3 684 aa13.89□□□□□ -0.19
RHBDL3-203ENST00000536287 RNF123Q5XPI4 1314 aa13.89□□□□□ -0.19
RHBDL3-203ENST00000536287 ISM2Q6H9L7 571 aa13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 PLEKHM2Q8IWE5 1019 aa13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 FAM200AQ8TCP9 573 aa13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 GBP3Q9H0R5 595 aa13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 DACT1Q9NYF0 836 aa13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 HMG20BQ9P0W2 317 aa13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 POLR3GO15318 223 aaPredicted RBP13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 ERLIN2O94905 339 aa13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 DNM1Q05193 864 aaKnown RBP13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 IQCEQ6IPM2 695 aa13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 RBM8AQ9Y5S9 174 aaKnown RBP13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 IFIT3O14879 490 aaKnown RBP13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 PHACTR3Q96KR7 559 aa13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 ATP8B2P98198 1209 aa13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 DDX46Q7L014 1031 aaKnown RBP13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 RAB11FIP4Q86YS3 637 aa13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 JARID2Q92833 1246 aaPredicted RBP13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 LRRC2Q9BYS8 371 aa13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 ZBTB3Q9H5J0 574 aa13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 SLC12A7Q9Y666 1083 aa13.88□□□□□ -0.19
RHBDL3-203ENST00000536287 JAKMIP3Q5VZ66 844 aa13.87□□□□□ -0.19
RHBDL3-203ENST00000536287 CEP85Q6P2H3 762 aa13.87□□□□□ -0.19
RHBDL3-203ENST00000536287 POGZQ7Z3K3 1410 aa13.87□□□□□ -0.19
RHBDL3-203ENST00000536287 KDM2BQ8NHM5 1336 aa13.87□□□□□ -0.19
RHBDL3-203ENST00000536287 CCDC148Q8NFR7 591 aa13.87□□□□□ -0.19
RHBDL3-203ENST00000536287 ZHX1Q9UKY1 873 aaPredicted RBP13.87□□□□□ -0.19
RHBDL3-203ENST00000536287 GOLGA8AA7E2F4 631 aa13.87□□□□□ -0.19
RHBDL3-203ENST00000536287 MAP3K12Q12852 859 aa13.87□□□□□ -0.19
RHBDL3-203ENST00000536287 MAPK8IP2Q13387 824 aaPredicted RBP13.87□□□□□ -0.19
RHBDL3-203ENST00000536287 SNW1Q13573 536 aaKnown RBP13.87□□□□□ -0.19
RHBDL3-203ENST00000536287 MICU3Q86XE3 530 aa13.87□□□□□ -0.19
RHBDL3-203ENST00000536287 ZSCAN16Q9H4T2 348 aaPredicted RBP13.87□□□□□ -0.19
RHBDL3-203ENST00000536287 ANO6Q4KMQ2 910 aa13.86□□□□□ -0.19
RHBDL3-203ENST00000536287 ZMYND15Q9H091 742 aa13.86□□□□□ -0.19
RHBDL3-203ENST00000536287 DMRT2Q9Y5R5 561 aa13.86□□□□□ -0.19
RHBDL3-203ENST00000536287 FANCAO15360 1455 aa13.86□□□□□ -0.19
RHBDL3-203ENST00000536287 F13A1P00488 732 aa13.86□□□□□ -0.19
RHBDL3-203ENST00000536287 CASQ1P31415 396 aa13.86□□□□□ -0.19
RHBDL3-203ENST00000536287 TMX1Q9H3N1 280 aa13.86□□□□□ -0.19
RHBDL3-203ENST00000536287 CHPF2Q9P2E5 772 aa13.86□□□□□ -0.19
RHBDL3-203ENST00000536287 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
RHBDL3-203ENST00000536287 IARSP41252 1262 aaKnown RBP13.86□□□□□ -0.19
RHBDL3-203ENST00000536287 CEP135Q66GS9 1140 aa13.86□□□□□ -0.19
RHBDL3-203ENST00000536287 NUP153P49790 1475 aaKnown RBP13.85□□□□□ -0.19
RHBDL3-203ENST00000536287 CTCFLQ8NI51 663 aaPredicted RBP13.85□□□□□ -0.19
RHBDL3-203ENST00000536287 ATP10BO94823 1461 aa13.85□□□□□ -0.19
RHBDL3-203ENST00000536287 RANBP6O60518 1105 aaKnown RBP13.85□□□□□ -0.19
RHBDL3-203ENST00000536287 KDM5BQ9UGL1 1544 aa13.85□□□□□ -0.19
RHBDL3-203ENST00000536287 SKILP12757 684 aa13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 EIF4A2Q14240 407 aaKnown RBP13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 IQCA1Q86XH1 822 aa13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 CCDC144CPQ8IYA2 1237 aa13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 USP26Q9BXU7 913 aa13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 TRERF1Q96PN7 1200 aa13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 ZBTB7BO15156 539 aaPredicted RBP13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 SPA17Q15506 151 aa13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 CCDC102BQ68D86 513 aa13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 LDHAL6AQ6ZMR3 332 aa13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 BICDL1Q6ZP65 573 aa13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 ZNF397Q8NF99 534 aaPredicted RBP13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 PAXBP1Q9Y5B6 917 aa13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 USP5P45974 858 aa13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 RBM25P49756 843 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms