RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 ZMYND15Q9H091 742 aa15.92■□□□□ 0.14
LDLR-203ENST00000535915 ADAMTS7Q9UKP4 1686 aa15.92■□□□□ 0.14
LDLR-203ENST00000535915 C1orf167Q5SNV9 1468 aa15.91■□□□□ 0.14
LDLR-203ENST00000535915 TCHHQ07283 1943 aa15.91■□□□□ 0.14
LDLR-203ENST00000535915 ERC1Q8IUD2 1116 aa15.91■□□□□ 0.14
LDLR-203ENST00000535915 LINS1Q8NG48 757 aa15.91■□□□□ 0.14
LDLR-203ENST00000535915 RAPGEF4Q8WZA2 1011 aa15.91■□□□□ 0.14
LDLR-203ENST00000535915 LSG1Q9H089 658 aaKnown RBP15.91■□□□□ 0.14
LDLR-203ENST00000535915 DDX21Q9NR30 783 aaKnown RBP eCLIP15.91■□□□□ 0.14
LDLR-203ENST00000535915 DIAPH3Q9NSV4 1193 aa15.91■□□□□ 0.14
LDLR-203ENST00000535915 GRM8O00222 908 aa15.91■□□□□ 0.14
LDLR-203ENST00000535915 IFIT2P09913 472 aaKnown RBP15.91■□□□□ 0.14
LDLR-203ENST00000535915 ANP32BQ92688 251 aaKnown RBP15.91■□□□□ 0.14
LDLR-203ENST00000535915 GPATCH3Q96I76 525 aa15.91■□□□□ 0.14
LDLR-203ENST00000535915 SPG7Q9UQ90 795 aa15.91■□□□□ 0.14
LDLR-203ENST00000535915 SNX14Q9Y5W7 946 aa15.91■□□□□ 0.14
LDLR-203ENST00000535915 C5P01031 1676 aa15.91■□□□□ 0.14
LDLR-203ENST00000535915 ALS2Q96Q42 1657 aa15.91■□□□□ 0.14
LDLR-203ENST00000535915 ECHDC1Q9NTX5 307 aa15.9■□□□□ 0.14
LDLR-203ENST00000535915 SLC39A6Q13433 755 aa15.9■□□□□ 0.14
LDLR-203ENST00000535915 NLRP2Q9NX02 1062 aa15.9■□□□□ 0.14
LDLR-203ENST00000535915 RBM27Q9P2N5 1060 aaKnown RBP15.9■□□□□ 0.14
LDLR-203ENST00000535915 SUCLG2Q96I99 432 aa15.89■□□□□ 0.13
LDLR-203ENST00000535915 C19orf44Q9H6X5 657 aa15.89■□□□□ 0.13
LDLR-203ENST00000535915 CLCN1P35523 988 aa15.89■□□□□ 0.13
LDLR-203ENST00000535915 ZNF790Q6PG37 636 aa15.89■□□□□ 0.13
LDLR-203ENST00000535915 RIC3Q7Z5B4 369 aa15.89■□□□□ 0.13
LDLR-203ENST00000535915 AACSQ86V21 672 aa15.89■□□□□ 0.13
LDLR-203ENST00000535915 RUFY2Q8WXA3 655 aa15.89■□□□□ 0.13
LDLR-203ENST00000535915 CCDC173Q0VFZ6 552 aa15.88■□□□□ 0.13
LDLR-203ENST00000535915 BICC1Q9H694 974 aaKnown RBP15.88■□□□□ 0.13
LDLR-203ENST00000535915 LMTK3Q96Q04 1460 aa15.88■□□□□ 0.13
LDLR-203ENST00000535915 MYL6BP14649 208 aa15.88■□□□□ 0.13
LDLR-203ENST00000535915 PDIA6Q15084 440 aa15.88■□□□□ 0.13
LDLR-203ENST00000535915 RASEFQ8IZ41 740 aa15.88■□□□□ 0.13
LDLR-203ENST00000535915 ESPNB1AK53 854 aa15.87■□□□□ 0.13
LDLR-203ENST00000535915 SLC52A2Q9HAB3 445 aa15.87■□□□□ 0.13
LDLR-203ENST00000535915 NPHP3Q7Z494 1330 aa15.87■□□□□ 0.13
LDLR-203ENST00000535915 G3BP1Q13283 466 aaKnown RBP eCLIP15.87■□□□□ 0.13
LDLR-203ENST00000535915 KAZALD1Q96I82 304 aa15.87■□□□□ 0.13
LDLR-203ENST00000535915 NSFL1CQ9UNZ2 370 aaKnown RBP15.87■□□□□ 0.13
LDLR-203ENST00000535915 UTYO14607 1347 aa15.87■□□□□ 0.13
LDLR-203ENST00000535915 MBD3O95983 291 aa15.87■□□□□ 0.13
LDLR-203ENST00000535915 TATP17735 454 aaPredicted RBP15.87■□□□□ 0.13
LDLR-203ENST00000535915 AK2P54819 239 aa15.87■□□□□ 0.13
LDLR-203ENST00000535915 NFATC2IPQ8NCF5 419 aa15.87■□□□□ 0.13
LDLR-203ENST00000535915 TMEM63CQ9P1W3 806 aa15.87■□□□□ 0.13
LDLR-203ENST00000535915 NEXNQ0ZGT2 675 aa15.86■□□□□ 0.13
LDLR-203ENST00000535915 FOXD4L6Q3SYB3 417 aaPredicted RBP15.86■□□□□ 0.13
LDLR-203ENST00000535915 FOXD4L3Q6VB84 417 aaPredicted RBP15.86■□□□□ 0.13
LDLR-203ENST00000535915 TTC14Q96N46 770 aa15.86■□□□□ 0.13
LDLR-203ENST00000535915 KDM6AO15550 1401 aaPredicted RBP15.86■□□□□ 0.13
LDLR-203ENST00000535915 PRIM1P49642 420 aaKnown RBP15.86■□□□□ 0.13
LDLR-203ENST00000535915 LARP1Q6PKG0 1096 aaKnown RBP15.86■□□□□ 0.13
LDLR-203ENST00000535915 EVI5LQ96CN4 794 aa15.86■□□□□ 0.13
LDLR-203ENST00000535915 ERBB4Q15303 1308 aa15.85■□□□□ 0.13
LDLR-203ENST00000535915 WDR33Q9C0J8 1336 aaKnown RBP15.85■□□□□ 0.13
LDLR-203ENST00000535915 SASH1O94885 1247 aa15.85■□□□□ 0.13
LDLR-203ENST00000535915 IGKV5-2P06315 115 aa15.85■□□□□ 0.13
LDLR-203ENST00000535915 PHKG2P15735 406 aa15.85■□□□□ 0.13
LDLR-203ENST00000535915 CASTP20810 708 aaKnown RBP15.85■□□□□ 0.13
LDLR-203ENST00000535915 DDX17Q92841 729 aaKnown RBP15.85■□□□□ 0.13
LDLR-203ENST00000535915 NAP1L5Q96NT1 182 aaPredicted RBP15.85■□□□□ 0.13
LDLR-203ENST00000535915 PPP1R9BQ96SB3 815 aa15.85■□□□□ 0.13
LDLR-203ENST00000535915 LARP6Q9BRS8 491 aaKnown RBP15.85■□□□□ 0.13
LDLR-203ENST00000535915 MST1RQ04912 1400 aa15.85■□□□□ 0.13
LDLR-203ENST00000535915 CSB-PGBD3P0DP91 1061 aa15.85■□□□□ 0.13
LDLR-203ENST00000535915 ATF3P18847 181 aa15.85■□□□□ 0.13
LDLR-203ENST00000535915 PTH1RQ03431 593 aa15.85■□□□□ 0.13
LDLR-203ENST00000535915 SIL1Q9H173 461 aa15.85■□□□□ 0.13
LDLR-203ENST00000535915 RBSNQ9H1K0 784 aa15.85■□□□□ 0.13
LDLR-203ENST00000535915 LIMCH1Q9UPQ0 1083 aa15.85■□□□□ 0.13
LDLR-203ENST00000535915 AFDNP55196 1824 aaKnown RBP15.84■□□□□ 0.13
LDLR-203ENST00000535915 HSP90AA2PQ14568 343 aaPredicted RBP15.84■□□□□ 0.13
LDLR-203ENST00000535915 XAGE3Q8WTP9 111 aa15.84■□□□□ 0.13
LDLR-203ENST00000535915 CCDC8Q9H0W5 538 aaPredicted RBP15.84■□□□□ 0.13
LDLR-203ENST00000535915 SYCE3A1L190 88 aa15.84■□□□□ 0.13
LDLR-203ENST00000535915 EAF2Q96CJ1 260 aaPredicted RBP15.84■□□□□ 0.13
LDLR-203ENST00000535915 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.84■□□□□ 0.13
LDLR-203ENST00000535915 MEGF6O75095 1541 aa15.83■□□□□ 0.13
LDLR-203ENST00000535915 NEURL1BA8MQ27 555 aa15.83■□□□□ 0.13
LDLR-203ENST00000535915 CPA1P15085 419 aa15.83■□□□□ 0.13
LDLR-203ENST00000535915 LRSAM1Q6UWE0 723 aa15.83■□□□□ 0.13
LDLR-203ENST00000535915 RUFY3Q7L099 469 aa15.83■□□□□ 0.13
LDLR-203ENST00000535915 COPS6Q7L5N1 327 aa15.83■□□□□ 0.13
LDLR-203ENST00000535915 COL18A1P39060 1754 aa15.83■□□□□ 0.12
LDLR-203ENST00000535915 PRPF40BQ6NWY9 871 aaKnown RBP15.83■□□□□ 0.12
LDLR-203ENST00000535915 IFNL2Q8IZJ0 200 aa15.83■□□□□ 0.12
LDLR-203ENST00000535915 MYD88Q99836 296 aa15.83■□□□□ 0.12
LDLR-203ENST00000535915 ZNF496Q96IT1 587 aaPredicted RBP15.82■□□□□ 0.12
LDLR-203ENST00000535915 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.82■□□□□ 0.12
LDLR-203ENST00000535915 TTC5Q8N0Z6 440 aa15.82■□□□□ 0.12
LDLR-203ENST00000535915 KLHDC4Q8TBB5 520 aa15.82■□□□□ 0.12
LDLR-203ENST00000535915 CABLES1Q8TDN4 633 aa15.82■□□□□ 0.12
LDLR-203ENST00000535915 JAKMIP1Q96N16 626 aaKnown RBP15.82■□□□□ 0.12
LDLR-203ENST00000535915 GDPD2Q9HCC8 539 aa15.82■□□□□ 0.12
LDLR-203ENST00000535915 RPAP1Q9BWH6 1393 aaPredicted RBP15.82■□□□□ 0.12
LDLR-203ENST00000535915 GCKRQ14397 625 aa15.81■□□□□ 0.12
LDLR-203ENST00000535915 METTL22Q9BUU2 404 aaPredicted RBP15.81■□□□□ 0.12
LDLR-203ENST00000535915 TLR7Q9NYK1 1049 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms