RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 CYB5RLQ6IPT4 315 aa16.02■□□□□ 0.16
HDAC4-214ENST00000535493 CHPF2Q9P2E5 772 aa16.02■□□□□ 0.16
HDAC4-214ENST00000535493 KCNJ4P48050 445 aa16.02■□□□□ 0.15
HDAC4-214ENST00000535493 NLRP6P59044 892 aa16.02■□□□□ 0.15
HDAC4-214ENST00000535493 HMGN5P82970 282 aaKnown RBP16.02■□□□□ 0.15
HDAC4-214ENST00000535493 FAM227BQ96M60 508 aa16.02■□□□□ 0.15
HDAC4-214ENST00000535493 SPTLC3Q9NUV7 552 aa16.02■□□□□ 0.15
HDAC4-214ENST00000535493 OVOS2A0A0J9YW53 1432 aa16.01■□□□□ 0.15
HDAC4-214ENST00000535493 OVOS2Q6IE36 1432 aa16.01■□□□□ 0.15
HDAC4-214ENST00000535493 FAM69CQ0P6D2 419 aa16.01■□□□□ 0.15
HDAC4-214ENST00000535493 C14orf37Q86TY3 774 aa16.01■□□□□ 0.15
HDAC4-214ENST00000535493 KIF1BPQ96EK5 621 aa16.01■□□□□ 0.15
HDAC4-214ENST00000535493 TPCN1Q9ULQ1 816 aa16.01■□□□□ 0.15
HDAC4-214ENST00000535493 LARP1BQ659C4 914 aaKnown RBP16.01■□□□□ 0.15
HDAC4-214ENST00000535493 DRC7Q8IY82 874 aa16.01■□□□□ 0.15
HDAC4-214ENST00000535493 C16orf45Q96MC5 204 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-214ENST00000535493 LGR6Q9HBX8 967 aa16■□□□□ 0.15
HDAC4-214ENST00000535493 C3P01024 1663 aa16■□□□□ 0.15
HDAC4-214ENST00000535493 RICTORQ6R327 1708 aa16■□□□□ 0.15
HDAC4-214ENST00000535493 PPFIA3O75145 1194 aa15.99■□□□□ 0.15
HDAC4-214ENST00000535493 LETM1O95202 739 aaPredicted RBP15.99■□□□□ 0.15
HDAC4-214ENST00000535493 CCDC186Q7Z3E2 898 aa15.99■□□□□ 0.15
HDAC4-214ENST00000535493 DACT1Q9NYF0 836 aa15.99■□□□□ 0.15
HDAC4-214ENST00000535493 ATP6V1DQ9Y5K8 247 aa15.99■□□□□ 0.15
HDAC4-214ENST00000535493 CYP46A1Q9Y6A2 500 aa15.99■□□□□ 0.15
HDAC4-214ENST00000535493 USP6P35125 1406 aa15.99■□□□□ 0.15
HDAC4-214ENST00000535493 POLA2Q14181 598 aa15.99■□□□□ 0.15
HDAC4-214ENST00000535493 PDCL2Q8N4E4 241 aa15.99■□□□□ 0.15
HDAC4-214ENST00000535493 ESF1Q9H501 851 aaKnown RBP15.99■□□□□ 0.15
HDAC4-214ENST00000535493 A0A087WWV3 80 aa15.98■□□□□ 0.15
HDAC4-214ENST00000535493 CCDC192P0DO97 292 aa15.98■□□□□ 0.15
HDAC4-214ENST00000535493 IL17RAQ96F46 866 aa15.98■□□□□ 0.15
HDAC4-214ENST00000535493 DDX11Q96FC9 970 aa15.98■□□□□ 0.15
HDAC4-214ENST00000535493 RAB11FIP3O75154 756 aa15.98■□□□□ 0.15
HDAC4-214ENST00000535493 GTF2F1P35269 517 aaKnown RBP eCLIP15.98■□□□□ 0.15
HDAC4-214ENST00000535493 CCDC8Q9H0W5 538 aaPredicted RBP15.98■□□□□ 0.15
HDAC4-214ENST00000535493 ARHGEF10O15013 1369 aa15.97■□□□□ 0.15
HDAC4-214ENST00000535493 IGSF1Q8N6C5 1336 aa15.97■□□□□ 0.15
HDAC4-214ENST00000535493 PLEKHG3A1L390 1219 aa15.97■□□□□ 0.15
HDAC4-214ENST00000535493 CEBPZQ03701 1054 aaKnown RBP15.97■□□□□ 0.15
HDAC4-214ENST00000535493 TYRO3Q06418 890 aa15.97■□□□□ 0.15
HDAC4-214ENST00000535493 ANO6Q4KMQ2 910 aa15.97■□□□□ 0.15
HDAC4-214ENST00000535493 MRVI1Q9Y6F6 885 aa15.97■□□□□ 0.15
HDAC4-214ENST00000535493 MON2Q7Z3U7 1717 aa15.97■□□□□ 0.15
HDAC4-214ENST00000535493 FLT4P35916 1363 aa15.97■□□□□ 0.15
HDAC4-214ENST00000535493 LTKP29376 864 aa15.97■□□□□ 0.15
HDAC4-214ENST00000535493 FOSBP53539 338 aa15.97■□□□□ 0.15
HDAC4-214ENST00000535493 CWF19L2Q2TBE0 894 aaKnown RBP15.97■□□□□ 0.15
HDAC4-214ENST00000535493 SIL1Q9H173 461 aa15.97■□□□□ 0.15
HDAC4-214ENST00000535493 RBM8AQ9Y5S9 174 aaKnown RBP15.97■□□□□ 0.15
HDAC4-214ENST00000535493 TUBGCP6Q96RT7 1819 aa15.96■□□□□ 0.15
HDAC4-214ENST00000535493 NUP62CLQ9H1M0 184 aa15.96■□□□□ 0.15
HDAC4-214ENST00000535493 SETD1AO15047 1707 aaKnown RBP15.96■□□□□ 0.15
HDAC4-214ENST00000535493 CHGBP05060 677 aa15.96■□□□□ 0.15
HDAC4-214ENST00000535493 BEND3Q5T5X7 828 aa15.96■□□□□ 0.15
HDAC4-214ENST00000535493 CLASRPQ8N2M8 674 aaKnown RBP15.96■□□□□ 0.15
HDAC4-214ENST00000535493 KLHDC4Q8TBB5 520 aa15.96■□□□□ 0.15
HDAC4-214ENST00000535493 EDC3Q96F86 508 aaKnown RBP15.96■□□□□ 0.15
HDAC4-214ENST00000535493 NDUFB9Q9Y6M9 179 aa15.96■□□□□ 0.15
HDAC4-214ENST00000535493 AOX1Q06278 1338 aa15.96■□□□□ 0.14
HDAC4-214ENST00000535493 DMTNQ08495 405 aa15.96■□□□□ 0.14
HDAC4-214ENST00000535493 CHAF1AQ13111 956 aaPredicted RBP15.96■□□□□ 0.14
HDAC4-214ENST00000535493 MAP3K11Q16584 847 aa15.96■□□□□ 0.14
HDAC4-214ENST00000535493 VPS53Q5VIR6 699 aa15.96■□□□□ 0.14
HDAC4-214ENST00000535493 LARP1Q6PKG0 1096 aaKnown RBP15.96■□□□□ 0.14
HDAC4-214ENST00000535493 AACSQ86V21 672 aa15.96■□□□□ 0.14
HDAC4-214ENST00000535493 DNAAF4Q8WXU2 420 aa15.96■□□□□ 0.14
HDAC4-214ENST00000535493 TRIM5Q9C035 493 aa15.96■□□□□ 0.14
HDAC4-214ENST00000535493 ZSWIM6Q9HCJ5 1215 aa15.96■□□□□ 0.14
HDAC4-214ENST00000535493 TLR7Q9NYK1 1049 aaKnown RBP15.96■□□□□ 0.14
HDAC4-214ENST00000535493 NRXN3Q9Y4C0 1643 aa15.95■□□□□ 0.14
HDAC4-214ENST00000535493 PRAMEF22A3QJZ6 481 aa15.95■□□□□ 0.14
HDAC4-214ENST00000535493 GOLGA6L4A6NEF3 574 aa15.95■□□□□ 0.14
HDAC4-214ENST00000535493 GLRX3O76003 335 aaKnown RBP15.95■□□□□ 0.14
HDAC4-214ENST00000535493 IFIT2P09913 472 aaKnown RBP15.95■□□□□ 0.14
HDAC4-214ENST00000535493 CREB3L3Q68CJ9 461 aa15.95■□□□□ 0.14
HDAC4-214ENST00000535493 ZNF592Q92610 1267 aa15.95■□□□□ 0.14
HDAC4-214ENST00000535493 BOLA2Q9H3K6 86 aa15.95■□□□□ 0.14
HDAC4-214ENST00000535493 CBX8Q9HC52 389 aa15.95■□□□□ 0.14
HDAC4-214ENST00000535493 NRKQ7Z2Y5 1582 aa15.95■□□□□ 0.14
HDAC4-214ENST00000535493 FAM200AQ8TCP9 573 aa15.95■□□□□ 0.14
HDAC4-214ENST00000535493 FBXW7Q969H0 707 aa15.95■□□□□ 0.14
HDAC4-214ENST00000535493 TNMDQ9H2S6 317 aa15.95■□□□□ 0.14
HDAC4-214ENST00000535493 NR1I2O75469 434 aa15.94■□□□□ 0.14
HDAC4-214ENST00000535493 HOXC9P31274 260 aa15.94■□□□□ 0.14
HDAC4-214ENST00000535493 KRT85P78386 507 aa15.94■□□□□ 0.14
HDAC4-214ENST00000535493 NMIQ13287 307 aaPredicted RBP15.94■□□□□ 0.14
HDAC4-214ENST00000535493 ARID5BQ14865 1188 aa15.94■□□□□ 0.14
HDAC4-214ENST00000535493 PROSER3Q2NL68 480 aa15.94■□□□□ 0.14
HDAC4-214ENST00000535493 DNAJC25Q9H1X3 360 aa15.94■□□□□ 0.14
HDAC4-214ENST00000535493 C9orf78Q9NZ63 289 aaPredicted RBP15.94■□□□□ 0.14
HDAC4-214ENST00000535493 KDRP35968 1356 aa15.94■□□□□ 0.14
HDAC4-214ENST00000535493 NECTIN1Q15223 517 aa15.94■□□□□ 0.14
HDAC4-214ENST00000535493 SBNO1A3KN83 1393 aa15.94■□□□□ 0.14
HDAC4-214ENST00000535493 USP31Q70CQ4 1352 aa15.94■□□□□ 0.14
HDAC4-214ENST00000535493 JAK2O60674 1132 aa15.93■□□□□ 0.14
HDAC4-214ENST00000535493 ZKSCAN1P17029 563 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-214ENST00000535493 ECHDC1Q9NTX5 307 aa15.93■□□□□ 0.14
HDAC4-214ENST00000535493 A0A0D9SFI3 127 aa15.93■□□□□ 0.14
HDAC4-214ENST00000535493 RBM33Q96EV2 1170 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms