RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 AFDNP55196 1824 aaKnown RBP17.44■□□□□ 0.38
CLSTN3-205ENST00000535452 LMOD3Q0VAK6 560 aa17.44■□□□□ 0.38
CLSTN3-205ENST00000535452 NYXQ9GZU5 481 aa17.44■□□□□ 0.38
CLSTN3-205ENST00000535452 TMX4Q9H1E5 349 aaPredicted RBP17.44■□□□□ 0.38
CLSTN3-205ENST00000535452 SCN7AQ01118 1682 aa17.44■□□□□ 0.38
CLSTN3-205ENST00000535452 RALBP1Q15311 655 aa17.43■□□□□ 0.38
CLSTN3-205ENST00000535452 CCDC24Q8N4L8 307 aa17.43■□□□□ 0.38
CLSTN3-205ENST00000535452 NRXN2Q9P2S2 1712 aa17.43■□□□□ 0.38
CLSTN3-205ENST00000535452 SIPA1L3O60292 1781 aaPredicted RBP17.43■□□□□ 0.38
CLSTN3-205ENST00000535452 NPR1P16066 1061 aa17.42■□□□□ 0.38
CLSTN3-205ENST00000535452 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
CLSTN3-205ENST00000535452 NFE2L2Q16236 605 aa17.42■□□□□ 0.38
CLSTN3-205ENST00000535452 NGEFQ8N5V2 710 aa17.42■□□□□ 0.38
CLSTN3-205ENST00000535452 TNRC6CQ9HCJ0 1690 aaKnown RBP17.42■□□□□ 0.38
CLSTN3-205ENST00000535452 FAM177BA6PVY3 158 aa17.41■□□□□ 0.38
CLSTN3-205ENST00000535452 ALDH1B1P30837 517 aa17.41■□□□□ 0.38
CLSTN3-205ENST00000535452 CCDC93Q567U6 631 aa17.41■□□□□ 0.38
CLSTN3-205ENST00000535452 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
CLSTN3-205ENST00000535452 SRGNP10124 158 aa17.4■□□□□ 0.38
CLSTN3-205ENST00000535452 RRP7AQ9Y3A4 280 aaKnown RBP17.4■□□□□ 0.38
CLSTN3-205ENST00000535452 DLEC1Q9Y238 1755 aa17.39■□□□□ 0.37
CLSTN3-205ENST00000535452 MIS18AQ9NYP9 233 aa17.39■□□□□ 0.37
CLSTN3-205ENST00000535452 TSPYL4Q9UJ04 414 aa17.39■□□□□ 0.37
CLSTN3-205ENST00000535452 PRAMEF22A3QJZ6 481 aa17.38■□□□□ 0.37
CLSTN3-205ENST00000535452 IQCA1LA6NCM1 817 aa17.38■□□□□ 0.37
CLSTN3-205ENST00000535452 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
CLSTN3-205ENST00000535452 RTKN2Q8IZC4 609 aa17.38■□□□□ 0.37
CLSTN3-205ENST00000535452 RPGRQ92834 1020 aaKnown RBP17.38■□□□□ 0.37
CLSTN3-205ENST00000535452 LTBP3Q9NS15 1303 aa17.38■□□□□ 0.37
CLSTN3-205ENST00000535452 ERVV-1B6SEH8 477 aa17.37■□□□□ 0.37
CLSTN3-205ENST00000535452 NFKBIEO00221 500 aa17.37■□□□□ 0.37
CLSTN3-205ENST00000535452 MYL6BP14649 208 aa17.37■□□□□ 0.37
CLSTN3-205ENST00000535452 RIPK4P57078 832 aa17.36■□□□□ 0.37
CLSTN3-205ENST00000535452 ERBB4Q15303 1308 aa17.36■□□□□ 0.37
CLSTN3-205ENST00000535452 PPP1R42Q7Z4L9 355 aa17.35■□□□□ 0.37
CLSTN3-205ENST00000535452 BCORQ6W2J9 1755 aa17.35■□□□□ 0.37
CLSTN3-205ENST00000535452 NBPF26B4DH59 902 aa17.34■□□□□ 0.37
CLSTN3-205ENST00000535452 EIF4A1P60842 406 aaKnown RBP17.34■□□□□ 0.37
CLSTN3-205ENST00000535452 GRIPAP1Q4V328 841 aa17.34■□□□□ 0.37
CLSTN3-205ENST00000535452 IFFO2Q5TF58 517 aa17.34■□□□□ 0.37
CLSTN3-205ENST00000535452 CC2D2BQ6DHV5 1058 aa17.34■□□□□ 0.37
CLSTN3-205ENST00000535452 NBPF10Q6P3W6 841 aaKnown RBP17.34■□□□□ 0.37
CLSTN3-205ENST00000535452 MAP3K15Q6ZN16 1313 aa17.34■□□□□ 0.37
CLSTN3-205ENST00000535452 NBPF15Q8N660 670 aa17.34■□□□□ 0.37
CLSTN3-205ENST00000535452 JDP2Q8WYK2 163 aa17.34■□□□□ 0.37
CLSTN3-205ENST00000535452 SBF1O95248 1867 aa17.33■□□□□ 0.37
CLSTN3-205ENST00000535452 FKBP4Q02790 459 aaKnown RBP eCLIP17.33■□□□□ 0.36
CLSTN3-205ENST00000535452 KLRG1Q96E93 195 aa17.33■□□□□ 0.36
CLSTN3-205ENST00000535452 PLEKHF1Q96S99 279 aa17.33■□□□□ 0.36
CLSTN3-205ENST00000535452 BABAM1Q9NWV8 329 aa17.33■□□□□ 0.36
CLSTN3-205ENST00000535452 TIAM2Q8IVF5 1701 aa17.33■□□□□ 0.36
CLSTN3-205ENST00000535452 EIF2S2P20042 333 aaKnown RBP17.32■□□□□ 0.36
CLSTN3-205ENST00000535452 HSP90AB3PQ58FF7 597 aa17.32■□□□□ 0.36
CLSTN3-205ENST00000535452 RBM17Q96I25 401 aaKnown RBP17.32■□□□□ 0.36
CLSTN3-205ENST00000535452 ZBTB3Q9H5J0 574 aa17.32■□□□□ 0.36
CLSTN3-205ENST00000535452 MYBBP1AQ9BQG0 1328 aaKnown RBP17.31■□□□□ 0.36
CLSTN3-205ENST00000535452 GPTP24298 496 aa17.31■□□□□ 0.36
CLSTN3-205ENST00000535452 HLFQ16534 295 aa17.31■□□□□ 0.36
CLSTN3-205ENST00000535452 PARP10Q53GL7 1025 aa17.31■□□□□ 0.36
CLSTN3-205ENST00000535452 THUMPD2Q9BTF0 503 aaKnown RBP17.31■□□□□ 0.36
CLSTN3-205ENST00000535452 LAMB4A4D0S4 1761 aa17.3■□□□□ 0.36
CLSTN3-205ENST00000535452 WDR90Q96KV7 1748 aa17.3■□□□□ 0.36
CLSTN3-205ENST00000535452 DDX10Q13206 875 aaKnown RBP17.3■□□□□ 0.36
CLSTN3-205ENST00000535452 CHADLQ6NUI6 762 aa17.3■□□□□ 0.36
CLSTN3-205ENST00000535452 ANKRD31Q8N7Z5 1873 aa17.3■□□□□ 0.36
CLSTN3-205ENST00000535452 KLRG2A4D1S0 409 aaPredicted RBP17.29■□□□□ 0.36
CLSTN3-205ENST00000535452 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
CLSTN3-205ENST00000535452 NEUROD2Q15784 382 aa17.29■□□□□ 0.36
CLSTN3-205ENST00000535452 NLRP3Q96P20 1036 aa17.29■□□□□ 0.36
CLSTN3-205ENST00000535452 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
CLSTN3-205ENST00000535452 LAS1LQ9Y4W2 734 aaKnown RBP17.29■□□□□ 0.36
CLSTN3-205ENST00000535452 COL11A2P13942 1736 aaPredicted RBP17.28■□□□□ 0.36
CLSTN3-205ENST00000535452 DDNO94850 711 aaPredicted RBP17.28■□□□□ 0.36
CLSTN3-205ENST00000535452 LMOD1P29536 600 aaPredicted RBP17.28■□□□□ 0.36
CLSTN3-205ENST00000535452 NUTM1Q86Y26 1132 aa17.28■□□□□ 0.36
CLSTN3-205ENST00000535452 IBTKQ9P2D0 1353 aaPredicted RBP17.28■□□□□ 0.36
CLSTN3-205ENST00000535452 IARSP41252 1262 aaKnown RBP17.27■□□□□ 0.36
CLSTN3-205ENST00000535452 TMPOP42166 694 aaKnown RBP17.27■□□□□ 0.36
CLSTN3-205ENST00000535452 EAPPQ56P03 285 aaPredicted RBP17.27■□□□□ 0.36
CLSTN3-205ENST00000535452 GIGYF2Q6Y7W6 1299 aaKnown RBP17.27■□□□□ 0.36
CLSTN3-205ENST00000535452 PNMA8AQ86V59 439 aaPredicted RBP17.27■□□□□ 0.36
CLSTN3-205ENST00000535452 DNAJC5GQ8N7S2 189 aa17.27■□□□□ 0.36
CLSTN3-205ENST00000535452 UTP14AQ9BVJ6 771 aaKnown RBP17.27■□□□□ 0.36
CLSTN3-205ENST00000535452 ZNF277Q9NRM2 450 aaPredicted RBP17.27■□□□□ 0.36
CLSTN3-205ENST00000535452 PRELPP51888 382 aa17.26■□□□□ 0.35
CLSTN3-205ENST00000535452 HTRA3P83110 453 aa17.26■□□□□ 0.35
CLSTN3-205ENST00000535452 TTLL7Q6ZT98 887 aa17.26■□□□□ 0.35
CLSTN3-205ENST00000535452 LDHDQ86WU2 507 aa17.26■□□□□ 0.35
CLSTN3-205ENST00000535452 SYNE4Q8N205 404 aa17.26■□□□□ 0.35
CLSTN3-205ENST00000535452 RUNDC1Q96C34 613 aa17.26■□□□□ 0.35
CLSTN3-205ENST00000535452 HACL1Q9UJ83 578 aa17.26■□□□□ 0.35
CLSTN3-205ENST00000535452 CCDC88AQ3V6T2 1871 aa17.26■□□□□ 0.35
CLSTN3-205ENST00000535452 RNF123Q5XPI4 1314 aa17.25■□□□□ 0.35
CLSTN3-205ENST00000535452 CACNA1SQ13698 1873 aa17.25■□□□□ 0.35
CLSTN3-205ENST00000535452 FER1L6Q2WGJ9 1857 aa17.25■□□□□ 0.35
CLSTN3-205ENST00000535452 PPEF1O14829 653 aaPredicted RBP17.25■□□□□ 0.35
CLSTN3-205ENST00000535452 CALD1Q05682 793 aaKnown RBP17.25■□□□□ 0.35
CLSTN3-205ENST00000535452 SUPT20HQ8NEM7 779 aa17.25■□□□□ 0.35
CLSTN3-205ENST00000535452 CHMP4AQ9BY43 222 aa17.25■□□□□ 0.35
CLSTN3-205ENST00000535452 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms