RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ALDH16A1Q8IZ83 802 aa10.06□□□□□ -0.8
PRKDC-205ENST00000535375 ABHD17AQ96GS6 310 aa10.06□□□□□ -0.8
PRKDC-205ENST00000535375 PRIMPOLQ96LW4 560 aa10.06□□□□□ -0.8
PRKDC-205ENST00000535375 ANKIB1Q9P2G1 1089 aa10.06□□□□□ -0.8
PRKDC-205ENST00000535375 FOXO3O43524 673 aa10.05□□□□□ -0.8
PRKDC-205ENST00000535375 SRSF11Q05519 484 aaKnown RBP10.05□□□□□ -0.8
PRKDC-205ENST00000535375 TMEM164Q5U3C3 297 aa10.05□□□□□ -0.8
PRKDC-205ENST00000535375 POTEAQ6S8J7 498 aa10.05□□□□□ -0.8
PRKDC-205ENST00000535375 KHNYNO15037 678 aaKnown RBP10.04□□□□□ -0.8
PRKDC-205ENST00000535375 BNIP3LO60238 219 aa10.04□□□□□ -0.8
PRKDC-205ENST00000535375 PRMT3O60678 531 aa10.04□□□□□ -0.8
PRKDC-205ENST00000535375 UBAP2LQ14157 1087 aaKnown RBP10.04□□□□□ -0.8
PRKDC-205ENST00000535375 ADAMTS2O95450 1211 aa10.03□□□□□ -0.8
PRKDC-205ENST00000535375 FAM69CQ0P6D2 419 aa10.03□□□□□ -0.8
PRKDC-205ENST00000535375 HIF1AQ16665 826 aa10.03□□□□□ -0.8
PRKDC-205ENST00000535375 DCDC2BA2VCK2 349 aa10.02□□□□□ -0.81
PRKDC-205ENST00000535375 FGFR3P22607 806 aa10.02□□□□□ -0.81
PRKDC-205ENST00000535375 IGF1RP08069 1367 aa10.01□□□□□ -0.81
PRKDC-205ENST00000535375 BMP4P12644 408 aa10.01□□□□□ -0.81
PRKDC-205ENST00000535375 MAP2K3P46734 347 aa10.01□□□□□ -0.81
PRKDC-205ENST00000535375 RTN1Q16799 776 aa10.01□□□□□ -0.81
PRKDC-205ENST00000535375 SAMD5Q5TGI4 173 aa10.01□□□□□ -0.81
PRKDC-205ENST00000535375 C7orf43Q8WVR3 580 aa10.01□□□□□ -0.81
PRKDC-205ENST00000535375 NDFIP2Q9NV92 336 aa10.01□□□□□ -0.81
PRKDC-205ENST00000535375 FAM157BP0CG42 384 aa10□□□□□ -0.81
PRKDC-205ENST00000535375 SLURP2P0DP57 97 aa10□□□□□ -0.81
PRKDC-205ENST00000535375 MAPTP10636 758 aaKnown RBP10□□□□□ -0.81
PRKDC-205ENST00000535375 TNP2Q05952 138 aa10□□□□□ -0.81
PRKDC-205ENST00000535375 SUSD3Q96L08 255 aa10□□□□□ -0.81
PRKDC-205ENST00000535375 CLP1Q92989 425 aaKnown RBP9.99□□□□□ -0.81
PRKDC-205ENST00000535375 HSH2DQ96JZ2 352 aa9.99□□□□□ -0.81
PRKDC-205ENST00000535375 CEP63Q96MT8 703 aa9.99□□□□□ -0.81
PRKDC-205ENST00000535375 MAP3K10Q02779 954 aa9.98□□□□□ -0.81
PRKDC-205ENST00000535375 FKBP5Q13451 457 aaPredicted RBP9.98□□□□□ -0.81
PRKDC-205ENST00000535375 OCLNQ16625 522 aa9.98□□□□□ -0.81
PRKDC-205ENST00000535375 SVOPQ8N4V2 548 aa9.98□□□□□ -0.81
PRKDC-205ENST00000535375 CXXC1Q9P0U4 656 aaPredicted RBP9.98□□□□□ -0.81
PRKDC-205ENST00000535375 CD33P20138 364 aa9.97□□□□□ -0.81
PRKDC-205ENST00000535375 CTBSQ01459 385 aa9.97□□□□□ -0.81
PRKDC-205ENST00000535375 LAMC2Q13753 1193 aa9.97□□□□□ -0.81
PRKDC-205ENST00000535375 ZNF280CQ8ND82 737 aa9.97□□□□□ -0.81
PRKDC-205ENST00000535375 MARK1Q9P0L2 795 aa9.97□□□□□ -0.81
PRKDC-205ENST00000535375 ZNF385CQ66K41 422 aaPredicted RBP9.96□□□□□ -0.82
PRKDC-205ENST00000535375 KLRG1Q96E93 195 aa9.96□□□□□ -0.82
PRKDC-205ENST00000535375 MKNK1Q9BUB5 465 aa9.96□□□□□ -0.82
PRKDC-205ENST00000535375 PTCD1O75127 700 aaKnown RBP9.95□□□□□ -0.82
PRKDC-205ENST00000535375 ATP2B4P23634 1241 aa9.95□□□□□ -0.82
PRKDC-205ENST00000535375 DGKZQ13574 1117 aa9.95□□□□□ -0.82
PRKDC-205ENST00000535375 OXCT2Q9BYC2 517 aaPredicted RBP9.95□□□□□ -0.82
PRKDC-205ENST00000535375 KLK14Q9P0G3 267 aa9.95□□□□□ -0.82
PRKDC-205ENST00000535375 PRR12Q9ULL5 1215 aa9.95□□□□□ -0.82
PRKDC-205ENST00000535375 EFSO43281 561 aa9.94□□□□□ -0.82
PRKDC-205ENST00000535375 C11orf91Q3C1V1 193 aa9.94□□□□□ -0.82
PRKDC-205ENST00000535375 FAM182BQ5T319 152 aa9.94□□□□□ -0.82
PRKDC-205ENST00000535375 LYPD4Q6UWN0 246 aa9.94□□□□□ -0.82
PRKDC-205ENST00000535375 BTLAQ7Z6A9 289 aa9.94□□□□□ -0.82
PRKDC-205ENST00000535375 WHAMMQ8TF30 809 aa9.94□□□□□ -0.82
PRKDC-205ENST00000535375 QTRT2Q9H974 415 aaKnown RBP9.94□□□□□ -0.82
PRKDC-205ENST00000535375 BRD7Q9NPI1 651 aa9.94□□□□□ -0.82
PRKDC-205ENST00000535375 ENAMQ9NRM1 1142 aa9.94□□□□□ -0.82
PRKDC-205ENST00000535375 TGFBR3LH3BV60 316 aa9.93□□□□□ -0.82
PRKDC-205ENST00000535375 C2CD2LO14523 706 aa9.93□□□□□ -0.82
PRKDC-205ENST00000535375 BCRP11274 1271 aa9.93□□□□□ -0.82
PRKDC-205ENST00000535375 COL26A1Q96A83 441 aa9.93□□□□□ -0.82
PRKDC-205ENST00000535375 MYO19Q96H55 970 aa9.93□□□□□ -0.82
PRKDC-205ENST00000535375 STRN4Q9NRL3 753 aa9.93□□□□□ -0.82
PRKDC-205ENST00000535375 GDF2Q9UK05 429 aaPredicted RBP9.93□□□□□ -0.82
PRKDC-205ENST00000535375 ADAMTS8Q9UP79 889 aa9.93□□□□□ -0.82
PRKDC-205ENST00000535375 CELA2BP08218 269 aaPredicted RBP9.92□□□□□ -0.82
PRKDC-205ENST00000535375 IER5Q5VY09 327 aa9.92□□□□□ -0.82
PRKDC-205ENST00000535375 ACDQ96AP0 544 aa9.92□□□□□ -0.82
PRKDC-205ENST00000535375 KCNH4Q9UQ05 1017 aa9.92□□□□□ -0.82
PRKDC-205ENST00000535375 TMEM88BA6NKF7 163 aa9.91□□□□□ -0.82
PRKDC-205ENST00000535375 TYRO3Q06418 890 aa9.91□□□□□ -0.82
PRKDC-205ENST00000535375 SFSWAPQ12872 951 aaKnown RBP9.91□□□□□ -0.82
PRKDC-205ENST00000535375 NAA30Q147X3 362 aaPredicted RBP9.91□□□□□ -0.82
PRKDC-205ENST00000535375 C16orf46Q6P387 395 aa9.91□□□□□ -0.82
PRKDC-205ENST00000535375 GOLGA6L1Q8N7Z2 621 aa9.91□□□□□ -0.82
PRKDC-205ENST00000535375 IFT43Q96FT9 208 aa9.91□□□□□ -0.82
PRKDC-205ENST00000535375 ARAFP10398 606 aa9.9□□□□□ -0.82
PRKDC-205ENST00000535375 NEUROD1Q13562 356 aa9.9□□□□□ -0.82
PRKDC-205ENST00000535375 COX20Q5RI15 118 aa9.9□□□□□ -0.82
PRKDC-205ENST00000535375 SLAIN2Q9P270 581 aa9.9□□□□□ -0.82
PRKDC-205ENST00000535375 RNF225M0QZC1 329 aaPredicted RBP9.89□□□□□ -0.83
PRKDC-205ENST00000535375 EPB42P16452 691 aa9.89□□□□□ -0.83
PRKDC-205ENST00000535375 PDE4CQ08493 712 aa9.89□□□□□ -0.83
PRKDC-205ENST00000535375 NEDD1Q8NHV4 660 aa9.89□□□□□ -0.83
PRKDC-205ENST00000535375 GGA1Q9UJY5 639 aa9.89□□□□□ -0.83
PRKDC-205ENST00000535375 LRFN2Q9ULH4 789 aa9.89□□□□□ -0.83
PRKDC-205ENST00000535375 BCS1LQ9Y276 419 aa9.89□□□□□ -0.83
PRKDC-205ENST00000535375 USTQ9Y2C2 406 aa9.89□□□□□ -0.83
PRKDC-205ENST00000535375 ARHGEF15O94989 841 aa9.88□□□□□ -0.83
PRKDC-205ENST00000535375 ADH6P28332 368 aa9.88□□□□□ -0.83
PRKDC-205ENST00000535375 IDH3AP50213 366 aa9.88□□□□□ -0.83
PRKDC-205ENST00000535375 GALNT6Q8NCL4 622 aa9.88□□□□□ -0.83
PRKDC-205ENST00000535375 LRRC4BQ9NT99 713 aa9.88□□□□□ -0.83
PRKDC-205ENST00000535375 DNMT3AQ9Y6K1 912 aaPredicted RBP9.88□□□□□ -0.83
PRKDC-205ENST00000535375 NEURL1BA8MQ27 555 aa9.87□□□□□ -0.83
PRKDC-205ENST00000535375 OIP5O43482 229 aa9.87□□□□□ -0.83
PRKDC-205ENST00000535375 MICAL2O94851 1124 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms