RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 BICC1Q9H694 974 aaKnown RBP16.81■□□□□ 0.28
NEK4-207ENST00000535191 STRCP1A6NGW2 1772 aa16.81■□□□□ 0.28
NEK4-207ENST00000535191 SNRPA1P09661 255 aaKnown RBP16.81■□□□□ 0.28
NEK4-207ENST00000535191 IFIT2P09913 472 aaKnown RBP16.81■□□□□ 0.28
NEK4-207ENST00000535191 HSPA4P34932 840 aa16.81■□□□□ 0.28
NEK4-207ENST00000535191 NEXNQ0ZGT2 675 aa16.81■□□□□ 0.28
NEK4-207ENST00000535191 TTC5Q8N0Z6 440 aa16.81■□□□□ 0.28
NEK4-207ENST00000535191 USP16Q9Y5T5 823 aa16.81■□□□□ 0.28
NEK4-207ENST00000535191 MEGF6O75095 1541 aa16.81■□□□□ 0.28
NEK4-207ENST00000535191 TNS3Q68CZ2 1445 aa16.81■□□□□ 0.28
NEK4-207ENST00000535191 ECHDC1Q9NTX5 307 aa16.8■□□□□ 0.28
NEK4-207ENST00000535191 MRE11P49959 708 aa16.8■□□□□ 0.28
NEK4-207ENST00000535191 G3BP1Q13283 466 aaKnown RBP eCLIP16.8■□□□□ 0.28
NEK4-207ENST00000535191 HSPA2P54652 639 aa16.79■□□□□ 0.28
NEK4-207ENST00000535191 MCTP1Q6DN14 999 aa16.79■□□□□ 0.28
NEK4-207ENST00000535191 GPATCH3Q96I76 525 aa16.79■□□□□ 0.28
NEK4-207ENST00000535191 ZDHHC9Q9Y397 364 aa16.79■□□□□ 0.28
NEK4-207ENST00000535191 ADAMTS7Q9UKP4 1686 aa16.79■□□□□ 0.28
NEK4-207ENST00000535191 NEURL1BA8MQ27 555 aa16.79■□□□□ 0.28
NEK4-207ENST00000535191 CUL4AQ13619 759 aa16.79■□□□□ 0.28
NEK4-207ENST00000535191 CWC27Q6UX04 472 aaKnown RBP16.79■□□□□ 0.28
NEK4-207ENST00000535191 ANKRD13DQ6ZTN6 518 aa16.79■□□□□ 0.28
NEK4-207ENST00000535191 KIAA1211Q6ZU35 1233 aa16.79■□□□□ 0.28
NEK4-207ENST00000535191 METTL22Q9BUU2 404 aaPredicted RBP16.79■□□□□ 0.28
NEK4-207ENST00000535191 UPF3BQ9BZI7 483 aaKnown RBP16.79■□□□□ 0.28
NEK4-207ENST00000535191 ISY1Q9ULR0 285 aaKnown RBP16.79■□□□□ 0.28
NEK4-207ENST00000535191 SIPA1L3O60292 1781 aaPredicted RBP16.79■□□□□ 0.28
NEK4-207ENST00000535191 TUBGCP6Q96RT7 1819 aa16.79■□□□□ 0.28
NEK4-207ENST00000535191 CABP4P57796 275 aa16.78■□□□□ 0.28
NEK4-207ENST00000535191 AACSQ86V21 672 aa16.78■□□□□ 0.28
NEK4-207ENST00000535191 FMNL2Q96PY5 1086 aa16.78■□□□□ 0.28
NEK4-207ENST00000535191 MYD88Q99836 296 aa16.78■□□□□ 0.28
NEK4-207ENST00000535191 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
NEK4-207ENST00000535191 SASH1O94885 1247 aa16.78■□□□□ 0.28
NEK4-207ENST00000535191 GCKRQ14397 625 aa16.78■□□□□ 0.28
NEK4-207ENST00000535191 LSG1Q9H089 658 aaKnown RBP16.78■□□□□ 0.28
NEK4-207ENST00000535191 PLEKHG2Q9H7P9 1386 aa16.78■□□□□ 0.28
NEK4-207ENST00000535191 NOL8Q76FK4 1167 aaKnown RBP16.77■□□□□ 0.28
NEK4-207ENST00000535191 ABCC6O95255 1503 aa16.77■□□□□ 0.28
NEK4-207ENST00000535191 RAD50Q92878 1312 aa16.77■□□□□ 0.28
NEK4-207ENST00000535191 KLHL40Q2TBA0 621 aa16.77■□□□□ 0.27
NEK4-207ENST00000535191 INTS4Q96HW7 963 aaKnown RBP16.77■□□□□ 0.27
NEK4-207ENST00000535191 GRPEL1Q9HAV7 217 aa16.77■□□□□ 0.27
NEK4-207ENST00000535191 DIAPH3Q9NSV4 1193 aa16.77■□□□□ 0.27
NEK4-207ENST00000535191 LRP10Q7Z4F1 713 aa16.76■□□□□ 0.27
NEK4-207ENST00000535191 RUFY2Q8WXA3 655 aa16.76■□□□□ 0.27
NEK4-207ENST00000535191 COL18A1P39060 1754 aa16.76■□□□□ 0.27
NEK4-207ENST00000535191 CPDO75976 1380 aa16.76■□□□□ 0.27
NEK4-207ENST00000535191 PIP4K2AP48426 406 aaPredicted RBP16.76■□□□□ 0.27
NEK4-207ENST00000535191 EAF2Q96CJ1 260 aaPredicted RBP16.76■□□□□ 0.27
NEK4-207ENST00000535191 PANK2Q9BZ23 570 aa16.76■□□□□ 0.27
NEK4-207ENST00000535191 LMBRD1Q9NUN5 540 aa16.76■□□□□ 0.27
NEK4-207ENST00000535191 SNX14Q9Y5W7 946 aa16.76■□□□□ 0.27
NEK4-207ENST00000535191 BRINP3Q76B58 766 aa16.75■□□□□ 0.27
NEK4-207ENST00000535191 GAS2L3Q86XJ1 694 aa16.75■□□□□ 0.27
NEK4-207ENST00000535191 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.75■□□□□ 0.27
NEK4-207ENST00000535191 EVI5LQ96CN4 794 aa16.75■□□□□ 0.27
NEK4-207ENST00000535191 CCDC8Q9H0W5 538 aaPredicted RBP16.75■□□□□ 0.27
NEK4-207ENST00000535191 SIL1Q9H173 461 aa16.75■□□□□ 0.27
NEK4-207ENST00000535191 EPHA10Q5JZY3 1008 aa16.74■□□□□ 0.27
NEK4-207ENST00000535191 SCN11AQ9UI33 1791 aa16.74■□□□□ 0.27
NEK4-207ENST00000535191 RASEFQ8IZ41 740 aa16.74■□□□□ 0.27
NEK4-207ENST00000535191 KLHDC4Q8TBB5 520 aa16.73■□□□□ 0.27
NEK4-207ENST00000535191 PRPF40AO75400 957 aaKnown RBP16.73■□□□□ 0.27
NEK4-207ENST00000535191 JARID2Q92833 1246 aaPredicted RBP16.73■□□□□ 0.27
NEK4-207ENST00000535191 PRDM11Q9NQV5 511 aa16.73■□□□□ 0.27
NEK4-207ENST00000535191 CRYBG1Q9Y4K1 1723 aa16.72■□□□□ 0.27
NEK4-207ENST00000535191 NCLP19338 710 aaKnown RBP16.72■□□□□ 0.27
NEK4-207ENST00000535191 FOXD4L5Q5VV16 416 aaPredicted RBP16.72■□□□□ 0.27
NEK4-207ENST00000535191 ZCRB1Q8TBF4 217 aaKnown RBP16.72■□□□□ 0.27
NEK4-207ENST00000535191 FOXD4L4Q8WXT5 416 aaPredicted RBP16.72■□□□□ 0.27
NEK4-207ENST00000535191 BRD1O95696 1058 aa16.72■□□□□ 0.27
NEK4-207ENST00000535191 TOM1L2Q6ZVM7 507 aa16.72■□□□□ 0.27
NEK4-207ENST00000535191 PTH1RQ03431 593 aa16.71■□□□□ 0.27
NEK4-207ENST00000535191 FAM43AQ8N2R8 423 aa16.71■□□□□ 0.27
NEK4-207ENST00000535191 TLR7Q9NYK1 1049 aaKnown RBP16.71■□□□□ 0.26
NEK4-207ENST00000535191 ATP5J2-PTCD1G3V325 749 aa16.7■□□□□ 0.26
NEK4-207ENST00000535191 PTCD1O75127 700 aaKnown RBP16.7■□□□□ 0.26
NEK4-207ENST00000535191 TTC14Q96N46 770 aa16.7■□□□□ 0.26
NEK4-207ENST00000535191 WDR17Q8IZU2 1322 aa16.7■□□□□ 0.26
NEK4-207ENST00000535191 AK9Q5TCS8 1911 aa16.7■□□□□ 0.26
NEK4-207ENST00000535191 UBE3BQ7Z3V4 1068 aa16.7■□□□□ 0.26
NEK4-207ENST00000535191 PLBD2Q8NHP8 589 aa16.7■□□□□ 0.26
NEK4-207ENST00000535191 BOLA2Q9H3K6 86 aa16.7■□□□□ 0.26
NEK4-207ENST00000535191 COPRSQ9NQ92 184 aa16.7■□□□□ 0.26
NEK4-207ENST00000535191 MRC1P22897 1456 aa16.69■□□□□ 0.26
NEK4-207ENST00000535191 A0A087WZG4 1122 aa16.69■□□□□ 0.26
NEK4-207ENST00000535191 HIP1O00291 1037 aa16.69■□□□□ 0.26
NEK4-207ENST00000535191 CHAMP1Q96JM3 812 aa16.69■□□□□ 0.26
NEK4-207ENST00000535191 SLAIN2Q9P270 581 aa16.69■□□□□ 0.26
NEK4-207ENST00000535191 AK2P54819 239 aa16.69■□□□□ 0.26
NEK4-207ENST00000535191 ERVV-2B6SEH9 535 aa16.68■□□□□ 0.26
NEK4-207ENST00000535191 RFX5P48382 616 aaPredicted RBP16.68■□□□□ 0.26
NEK4-207ENST00000535191 CAVIN1Q6NZI2 390 aaKnown RBP16.68■□□□□ 0.26
NEK4-207ENST00000535191 LIMCH1Q9UPQ0 1083 aa16.68■□□□□ 0.26
NEK4-207ENST00000535191 C5P01031 1676 aa16.68■□□□□ 0.26
NEK4-207ENST00000535191 PCDH11XQ9BZA7 1347 aa16.68■□□□□ 0.26
NEK4-207ENST00000535191 PCDH11YQ9BZA8 1340 aa16.68■□□□□ 0.26
NEK4-207ENST00000535191 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
NEK4-207ENST00000535191 RABL6Q3YEC7 729 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms